Cow genome map

Conread name: Ss1.1-Pig4-TMW8026L24.3

Conread position: 2-121
Cow position: chr28:32301397-32301516 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 2-220
Cow position: chr28:2088763-2088538 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 120, 32

Conread position: 2-220
Cow position: chr28:3004330-3004557 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 169
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 36, 0

Conread position: 2-220
Cow position: chr28:3745156-3744936 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 129, 32

Conread position: 2-220
Cow position: chr28:5569553-5569334 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 121, 32

Conread position: 2-220
Cow position: chr28:6478408-6478183 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 170
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 131, 36

Conread position: 2-220
Cow position: chr28:7005216-7004990 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 174
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 120, 32

Conread position: 2-220
Cow position: chr28:12997871-12997649 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 94, 32

Conread position: 2-220
Cow position: chr28:21362701-21362478 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 128, 36

Conread position: 2-220
Cow position: chr28:24499237-24499014 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 129, 24

Conread position: 2-220
Cow position: chr28:30304821-30305045 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 28, 11

Conread position: 2-221
Cow position: chr28:34606779-34606557 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 12, 18

Conread position: 2-222
Cow position: chr28:32786238-32786464 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 121, 32

Conread position: 3-113
Cow position: chr28:331712-331821 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 3-119
Cow position: chr28:7685748-7685863 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 3-131
Cow position: chr28:23839208-23839081 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 3-131
Cow position: chr28:30249305-30249432 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 97
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 3-183
Cow position: chr28:21104781-21104969 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 34, 168

Conread position: 3-187
Cow position: chr28:13323321-13323130 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 119, 35

Conread position: 3-188
Cow position: chr28:10194417-10194609 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 148
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 119, 35

Conread position: 3-189
Cow position: chr28:23675002-23674810 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 109, 14

Conread position: 3-189
Cow position: chr28:32588110-32588303 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 119, 35

Conread position: 3-190
Cow position: chr28:26717920-26717726 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 35, 179

Conread position: 3-196
Cow position: chr28:17030907-17031102 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 127, 31

Conread position: 3-201
Cow position: chr28:9288205-9288410 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 129, 35

Conread position: 3-206
Cow position: chr28:5816832-5816615 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 129, 31

Conread position: 3-208
Cow position: chr28:7744291-7744079 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 119, 31

Conread position: 3-208
Cow position: chr28:17391621-17391409 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 164
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 119, 31

Conread position: 3-208
Cow position: chr28:17663761-17663973 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 166
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 119, 31

Conread position: 3-210
Cow position: chr28:34880325-34880109 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 166
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 87, 31

Conread position: 3-212
Cow position: chr28:10479702-10479916 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 120, 31

Conread position: 3-216
Cow position: chr28:25701749-25701964 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 136, 39

Conread position: 3-217
Cow position: chr28:21896470-21896250 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 171
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 119, 35

Conread position: 3-218
Cow position: chr28:13522873-13522653 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 170
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 120, 31

Conread position: 3-219
Cow position: chr28:1508064-1507841 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 34, 43

Conread position: 3-219
Cow position: chr28:3627201-3626980 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 171
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 119, 35

Conread position: 3-219
Cow position: chr28:9182057-9181835 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 172
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 119, 35

Conread position: 3-220
Cow position: chr28:444596-444372 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 173
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 127, 45

Conread position: 3-220
Cow position: chr28:482520-482744 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 175
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 119, 35

Conread position: 3-220
Cow position: chr28:785855-785631 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 120, 31

Conread position: 3-220
Cow position: chr28:1025145-1025367 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 169
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 12, 32

Conread position: 3-220
Cow position: chr28:1164703-1164926 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 119, 30

Conread position: 3-220
Cow position: chr28:1197315-1197077 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 176
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 129, 31

Conread position: 3-220
Cow position: chr28:1811777-1811995 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 121, 31

Conread position: 3-220
Cow position: chr28:1956557-1956335 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 119, 43

Conread position: 3-220
Cow position: chr28:2644903-2644679 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 129, 35

Conread position: 3-220
Cow position: chr28:2662772-2662994 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 130, 36

Conread position: 3-220
Cow position: chr28:3188843-3189067 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 130, 31

Conread position: 3-220
Cow position: chr28:3652427-3652211 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 129, 31

Conread position: 3-220
Cow position: chr28:4214080-4213857 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 119, 15

Conread position: 3-220
Cow position: chr28:4929262-4929486 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 119, 35

Conread position: 3-220
Cow position: chr28:5211310-5211086 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 130, 35

Conread position: 3-220
Cow position: chr28:5312162-5311938 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 119, 35

Conread position: 3-220
Cow position: chr28:6472251-6472473 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 130, 35

Conread position: 3-220
Cow position: chr28:6535610-6535834 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 118, 43

Conread position: 3-220
Cow position: chr28:7059418-7059194 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 119, 35

Conread position: 3-220
Cow position: chr28:7336171-7335947 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 174
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 120, 31

Conread position: 3-220
Cow position: chr28:7443281-7443505 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 119, 35

Conread position: 3-220
Cow position: chr28:7829694-7829471 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 123, 35

Conread position: 3-220
Cow position: chr28:7907357-7907581 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 176
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 119, 35

Conread position: 3-220
Cow position: chr28:8717765-8717989 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 173
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 129, 31

Conread position: 3-220
Cow position: chr28:10280040-10279818 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 138, 31

Conread position: 3-220
Cow position: chr28:10303026-10302805 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 173
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 119, 43

Conread position: 3-220
Cow position: chr28:10590172-10590398 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 87, 31

Conread position: 3-220
Cow position: chr28:10772271-10772049 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 170
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 112, 34

Conread position: 3-220
Cow position: chr28:12217101-12217325 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 173
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 119, 35

Conread position: 3-220
Cow position: chr28:13463151-13462928 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 119, 31

Conread position: 3-220
Cow position: chr28:14511630-14511411 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 164
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 13, 57

Conread position: 3-220
Cow position: chr28:14666334-14666111 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 70, 31

Conread position: 3-220
Cow position: chr28:15054344-15054124 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 119, 35

Conread position: 3-220
Cow position: chr28:15351934-15352153 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 153
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 117, 34

Conread position: 3-220
Cow position: chr28:15604805-15604575 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 171
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 40, 0

Conread position: 3-220
Cow position: chr28:16181556-16181332 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 119, 35

Conread position: 3-220
Cow position: chr28:17369268-17369053 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 123, 31

Conread position: 3-220
Cow position: chr28:18516957-18517181 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 130, 31

Conread position: 3-220
Cow position: chr28:20935224-20935449 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 172
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 119, 31

Conread position: 3-220
Cow position: chr28:20967481-20967705 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 129, 31

Conread position: 3-220
Cow position: chr28:21768105-21768329 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 113, 31

Conread position: 3-220
Cow position: chr28:22255010-22255234 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 120, 31

Conread position: 3-220
Cow position: chr28:23310148-23310370 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 129, 35

Conread position: 3-220
Cow position: chr28:24592060-24591838 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 173
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 129, 35

Conread position: 3-220
Cow position: chr28:25596091-25595867 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 130, 34

Conread position: 3-220
Cow position: chr28:25762072-25761853 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 127, 31

Conread position: 3-220
Cow position: chr28:25826930-25827149 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 129, 31

Conread position: 3-220
Cow position: chr28:25849749-25849525 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 119, 35

Conread position: 3-220
Cow position: chr28:26419813-26420036 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 119, 31

Conread position: 3-220
Cow position: chr28:26923442-26923665 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 127, 31

Conread position: 3-220
Cow position: chr28:28929024-28928800 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 130, 43

Conread position: 3-220
Cow position: chr28:29823374-29823150 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 121, 31

Conread position: 3-220
Cow position: chr28:30533872-30534096 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 120, 31

Conread position: 3-220
Cow position: chr28:30966393-30966173 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 130, 31

Conread position: 3-220
Cow position: chr28:31848746-31848965 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 168
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 124, 31

Conread position: 3-220
Cow position: chr28:32730826-32731048 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 130, 36

Conread position: 3-220
Cow position: chr28:33255509-33255285 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 114, 31

Conread position: 3-220
Cow position: chr28:33639758-33639534 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 119, 31

Conread position: 3-220
Cow position: chr28:34583112-34582888 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 130, 35

Conread position: 3-220
Cow position: chr28:34597432-34597208 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 114, 31

Conread position: 3-222
Cow position: chr28:958062-957838 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 108, 31

Conread position: 3-222
Cow position: chr28:17599805-17600024 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 127, 31

Conread position: 3-222
Cow position: chr28:28357596-28357821 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 130, 31

Conread position: 3-222
Cow position: chr28:30098066-30097840 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 176
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 119, 31

Conread position: 3-223
Cow position: chr28:6959417-6959190 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 119, 23

Conread position: 3-223
Cow position: chr28:15917337-15917564 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 170
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 130, 31

Conread position: 3-228
Cow position: chr28:600996-601217 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 31, 0

Conread position: 3-230
Cow position: chr28:1289684-1289923 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 12, 19

Conread position: 3-231
Cow position: chr28:5748518-5748752 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 130, 31

Conread position: 3-233
Cow position: chr28:12650418-12650182 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 181
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 119, 31

Conread position: 4-220
Cow position: chr28:15589257-15589033 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 83, 30

Conread position: 4-220
Cow position: chr28:22230145-22230366 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 170
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 32, 79

Conread position: 4-220
Cow position: chr28:23794381-23794597 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 165
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 127, 30

Conread position: 4-230
Cow position: chr28:30960736-30960500 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 51, 30

Conread position: 5-219
Cow position: chr28:20410929-20410707 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 96, 29

Conread position: 5-223
Cow position: chr28:16041468-16041691 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 173
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 125, 29

Conread position: 6-220
Cow position: chr28:13880705-13880487 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 9, 14

Conread position: 7-220
Cow position: chr28:1214646-1214866 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 165
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 126, 27

Conread position: 7-220
Cow position: chr28:5111537-5111758 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 169
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 116, 27

Conread position: 7-220
Cow position: chr28:5940670-5940450 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 115, 27

Conread position: 7-220
Cow position: chr28:6474068-6474287 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 123, 27

Conread position: 7-220
Cow position: chr28:11502032-11502252 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 168
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 122, 30

Conread position: 7-220
Cow position: chr28:12155025-12154808 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 126, 27

Conread position: 7-220
Cow position: chr28:15032894-15033114 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 115, 27

Conread position: 7-220
Cow position: chr28:24670977-24670758 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 171
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 125, 27

Conread position: 7-220
Cow position: chr28:29036468-29036688 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 169
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 116, 27

Conread position: 10-184
Cow position: chr28:5791330-5791508 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 122, 24

Conread position: 10-220
Cow position: chr28:15600556-15600770 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 107, 24

Conread position: 11-146
Cow position: chr28:7888832-7888966 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 11-220
Cow position: chr28:5637230-5637015 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 166
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 111, 30

Conread position: 11-220
Cow position: chr28:6776823-6777039 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 166
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 24, 32

Conread position: 11-220
Cow position: chr28:10326240-10326025 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 119, 10

Conread position: 11-220
Cow position: chr28:22201139-22200930 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 126, 29

Conread position: 11-220
Cow position: chr28:24886040-24885825 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 168
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 111, 27

Conread position: 11-220
Cow position: chr28:26563363-26563149 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 69, 13

Conread position: 11-220
Cow position: chr28:28471205-28470987 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 164
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 114, 27

Conread position: 11-220
Cow position: chr28:28934783-28934999 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 166
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 112, 35

Conread position: 11-220
Cow position: chr28:34730912-34730697 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 165
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 121, 27

Conread position: 13-220
Cow position: chr28:12047365-12047572 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 162
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 120, 21

Conread position: 14-178
Cow position: chr28:31068786-31068621 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 106, 5

Conread position: 14-188
Cow position: chr28:1777738-1777560 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 118, 6

Conread position: 14-219
Cow position: chr28:980089-980299 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 117, 5

Conread position: 14-220
Cow position: chr28:7654441-7654654 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 77, 5

Conread position: 14-220
Cow position: chr28:11544304-11544516 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 23, 5

Conread position: 17-174
Cow position: chr28:16543655-16543819 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 116, 20

Conread position: 17-220
Cow position: chr28:6046970-6046761 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 105, 17

Conread position: 18-220
Cow position: chr28:15428842-15428637 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 94, 16

Conread position: 18-220
Cow position: chr28:29435621-29435822 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 123, 16

Conread position: 19-172
Cow position: chr28:10457909-10458067 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 117, 18

Conread position: 20-220
Cow position: chr28:4045390-4045184 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 83, 22

Conread position: 20-220
Cow position: chr28:6230521-6230727 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 106, 17

Conread position: 20-222
Cow position: chr28:3645614-3645411 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 108, 17

Conread position: 21-220
Cow position: chr28:16539966-16539765 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 125, 24

Conread position: 21-220
Cow position: chr28:19834276-19834071 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 163
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 111, 0

Conread position: 21-220
Cow position: chr28:28184555-28184349 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 157
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 112, 69

Conread position: 21-223
Cow position: chr28:25070013-25069803 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 166
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 16, 181

Conread position: 27-190
Cow position: chr28:17745164-17745332 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 103, 32

Conread position: 27-220
Cow position: chr28:10599826-10599625 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 10, 131

Conread position: 27-220
Cow position: chr28:21379671-21379470 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 105, 0

Conread position: 28-237
Cow position: chr28:2414697-2414484 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 106, 199

Conread position: 29-220
Cow position: chr28:23620128-23619929 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 102, 0

Conread position: 30-219
Cow position: chr28:12936248-12936446 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 153
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 103, 0

Conread position: 30-220
Cow position: chr28:14492495-14492300 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 85, 55

Conread position: 31-221
Cow position: chr28:1836905-1836706 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 49, 0

Conread position: 36-131
Cow position: chr28:6062318-6062223 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 36-222
Cow position: chr28:5824993-5824797 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 92, 0

Conread position: 42-220
Cow position: chr28:22580189-22580012 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 141
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 92, 45

Conread position: 43-220
Cow position: chr28:5867624-5867439 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 90, 0

Conread position: 45-220
Cow position: chr28:4376238-4376421 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 93, 0

Conread position: 45-220
Cow position: chr28:5571784-5571603 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 86, 30

Conread position: 45-220
Cow position: chr28:13373657-13373831 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 101, 85

Conread position: 46-223
Cow position: chr28:5336712-5336898 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 147
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 64, 0

Conread position: 47-220
Cow position: chr28:10575872-10576052 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 50-220
Cow position: chr28:14150136-14149959 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 83, 131

Conread position: 51-220
Cow position: chr28:7547876-7547699 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 83, 0

Conread position: 57-220
Cow position: chr28:21569038-21568867 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 74, 0

Conread position: 66-216
Cow position: chr28:1384349-1384507 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 66-220
Cow position: chr28:3068019-3067855 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 67, 0

Conread position: 66-220
Cow position: chr28:12407088-12407250 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 66-221
Cow position: chr28:9443133-9443292 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 58, 0

Conread position: 68-220
Cow position: chr28:4457447-4457289 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 62, 102

Conread position: 68-220
Cow position: chr28:12170458-12170621 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 75-220
Cow position: chr28:25563527-25563372 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 125
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 57, 0

Conread position: 76-220
Cow position: chr28:17602914-17603065 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 40, 12

Conread position: 77-222
Cow position: chr28:24620731-24620882 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 80-220
Cow position: chr28:12952321-12952173 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 83-254
Cow position: chr28:21767637-21767816 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 129-220
Cow position: chr28:10643435-10643527 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 79
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 225-337
Cow position: chr28:2762382-2762271 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 22, 0

Show alignments to all cow chromosomes.