Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8026L24.3 |
| Conread position: | 1-253 |
| Cow position: | chr29:20254327-20254071 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 122, 33 |
| Conread position: | 2-166 |
| Cow position: | chr29:11786163-11785993 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 130, 32 |
| Conread position: | 2-202 |
| Cow position: | chr29:7664840-7665046 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 131, 32 |
| Conread position: | 2-204 |
| Cow position: | chr29:29589831-29590036 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 79, 35 |
| Conread position: | 2-216 |
| Cow position: | chr29:16101957-16102178 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 131, 32 |
| Conread position: | 2-219 |
| Cow position: | chr29:17408292-17408064 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 120, 32 |
| Conread position: | 2-220 |
| Cow position: | chr29:45302-45525 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 131, 32 |
| Conread position: | 2-220 |
| Cow position: | chr29:3486208-3485987 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 128, 35 |
| Conread position: | 2-220 |
| Cow position: | chr29:32289551-32289326 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 178 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 15, 20 |
| Conread position: | 3-115 |
| Cow position: | chr29:7427983-7428094 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 3-131 |
| Cow position: | chr29:13624215-13624342 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 3-163 |
| Cow position: | chr29:38746207-38746039 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 113, 35 |
| Conread position: | 3-170 |
| Cow position: | chr29:27702236-27702062 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 130, 35 |
| Conread position: | 3-180 |
| Cow position: | chr29:11159365-11159549 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 119, 35 |
| Conread position: | 3-190 |
| Cow position: | chr29:16013012-16013207 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 129, 31 |
| Conread position: | 3-203 |
| Cow position: | chr29:3345566-3345363 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 12, 23 |
| Conread position: | 3-205 |
| Cow position: | chr29:24577811-24577604 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 127, 31 |
| Conread position: | 3-208 |
| Cow position: | chr29:6218647-6218854 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 143, 31 |
| Conread position: | 3-208 |
| Cow position: | chr29:26161674-26161890 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 83, 31 |
| Conread position: | 3-213 |
| Cow position: | chr29:18361437-18361654 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 12, 17 |
| Conread position: | 3-218 |
| Cow position: | chr29:29702243-29702458 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 138, 63 |
| Conread position: | 3-219 |
| Cow position: | chr29:2103006-2102783 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 120, 31 |
| Conread position: | 3-219 |
| Cow position: | chr29:6934648-6934427 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 120, 31 |
| Conread position: | 3-219 |
| Cow position: | chr29:32893873-32893665 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 12, 17 |
| Conread position: | 3-220 |
| Cow position: | chr29:408105-408327 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 119, 31 |
| Conread position: | 3-220 |
| Cow position: | chr29:726888-726664 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 173 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 119, 35 |
| Conread position: | 3-220 |
| Cow position: | chr29:2463713-2463935 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 129, 22 |
| Conread position: | 3-220 |
| Cow position: | chr29:2484067-2483843 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 119, 31 |
| Conread position: | 3-220 |
| Cow position: | chr29:2838177-2838401 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 113, 31 |
| Conread position: | 3-220 |
| Cow position: | chr29:3329751-3329528 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 119, 35 |
| Conread position: | 3-220 |
| Cow position: | chr29:3585053-3585274 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 129, 31 |
| Conread position: | 3-220 |
| Cow position: | chr29:4163847-4163623 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 129, 35 |
| Conread position: | 3-220 |
| Cow position: | chr29:4200537-4200325 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 3-220 |
| Cow position: | chr29:4217472-4217252 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 109, 17 |
| Conread position: | 3-220 |
| Cow position: | chr29:5240553-5240329 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 174 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 119, 31 |
| Conread position: | 3-220 |
| Cow position: | chr29:6262850-6263073 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 174 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 120, 31 |
| Conread position: | 3-220 |
| Cow position: | chr29:7812038-7812262 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 119, 31 |
| Conread position: | 3-220 |
| Cow position: | chr29:7847551-7847324 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 3-220 |
| Cow position: | chr29:8624037-8624261 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 119, 31 |
| Conread position: | 3-220 |
| Cow position: | chr29:8666821-8666609 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 3-220 |
| Cow position: | chr29:9079640-9079863 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 85, 31 |
| Conread position: | 3-220 |
| Cow position: | chr29:10237508-10237734 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 63, 31 |
| Conread position: | 3-220 |
| Cow position: | chr29:10248525-10248748 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 5, 23 |
| Conread position: | 3-220 |
| Cow position: | chr29:10644252-10644476 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 119, 31 |
| Conread position: | 3-220 |
| Cow position: | chr29:10846115-10845891 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 129, 31 |
| Conread position: | 3-220 |
| Cow position: | chr29:13057899-13057681 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 77, 34 |
| Conread position: | 3-220 |
| Cow position: | chr29:15117667-15117891 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 119, 35 |
| Conread position: | 3-220 |
| Cow position: | chr29:15699471-15699247 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 119, 35 |
| Conread position: | 3-220 |
| Cow position: | chr29:16036258-16036482 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 119, 35 |
| Conread position: | 3-220 |
| Cow position: | chr29:16064870-16064646 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 173 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 119, 35 |
| Conread position: | 3-220 |
| Cow position: | chr29:17138267-17138039 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 92, 31 |
| Conread position: | 3-220 |
| Cow position: | chr29:19515185-19515409 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 120, 31 |
| Conread position: | 3-220 |
| Cow position: | chr29:19525130-19525354 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 119, 35 |
| Conread position: | 3-220 |
| Cow position: | chr29:19620110-19620333 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 120, 21 |
| Conread position: | 3-220 |
| Cow position: | chr29:21227135-21226912 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 130, 35 |
| Conread position: | 3-220 |
| Cow position: | chr29:21474308-21474084 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 119, 35 |
| Conread position: | 3-220 |
| Cow position: | chr29:22279533-22279309 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 119, 34 |
| Conread position: | 3-220 |
| Cow position: | chr29:22746059-22745835 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 173 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 119, 35 |
| Conread position: | 3-220 |
| Cow position: | chr29:23979870-23979646 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 120, 31 |
| Conread position: | 3-220 |
| Cow position: | chr29:24806614-24806391 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 119, 35 |
| Conread position: | 3-220 |
| Cow position: | chr29:28657209-28657433 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 130, 31 |
| Conread position: | 3-220 |
| Cow position: | chr29:28697220-28697443 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 177 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 120, 18 |
| Conread position: | 3-220 |
| Cow position: | chr29:30433033-30433258 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 176 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 130, 31 |
| Conread position: | 3-220 |
| Cow position: | chr29:31094427-31094651 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 130, 35 |
| Conread position: | 3-220 |
| Cow position: | chr29:31765199-31764975 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 130, 35 |
| Conread position: | 3-220 |
| Cow position: | chr29:32291753-32291531 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 119, 214 |
| Conread position: | 3-220 |
| Cow position: | chr29:32515487-32515261 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 119, 35 |
| Conread position: | 3-220 |
| Cow position: | chr29:32543297-32543072 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 88, 31 |
| Conread position: | 3-220 |
| Cow position: | chr29:32556585-32556809 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 119, 35 |
| Conread position: | 3-220 |
| Cow position: | chr29:32800435-32800204 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 67, 31 |
| Conread position: | 3-220 |
| Cow position: | chr29:34524163-34524387 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 130, 35 |
| Conread position: | 3-220 |
| Cow position: | chr29:35265076-35264852 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 119, 35 |
| Conread position: | 3-220 |
| Cow position: | chr29:35273880-35274096 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 158, 31 |
| Conread position: | 3-220 |
| Cow position: | chr29:35956143-35956367 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 130, 35 |
| Conread position: | 3-220 |
| Cow position: | chr29:39076559-39076783 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 120, 31 |
| Conread position: | 3-220 |
| Cow position: | chr29:40294466-40294267 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 3-220 |
| Cow position: | chr29:40618691-40618903 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 130, 31 |
| Conread position: | 3-220 |
| Cow position: | chr29:42255819-42256043 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 119, 35 |
| Conread position: | 3-220 |
| Cow position: | chr29:43326673-43326446 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 113, 31 |
| Conread position: | 3-220 |
| Cow position: | chr29:45207669-45207447 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 120, 31 |
| Conread position: | 3-220 |
| Cow position: | chr29:45462392-45462168 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 113, 31 |
| Conread position: | 3-221 |
| Cow position: | chr29:31184535-31184310 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 175 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 119, 35 |
| Conread position: | 3-222 |
| Cow position: | chr29:607478-607704 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 174 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 32, 39 |
| Conread position: | 3-222 |
| Cow position: | chr29:17153404-17153184 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 127, 31 |
| Conread position: | 3-226 |
| Cow position: | chr29:132832-132606 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 129, 9 |
| Conread position: | 4-123 |
| Cow position: | chr29:2307160-2307042 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 4-220 |
| Cow position: | chr29:2430249-2430043 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 4-220 |
| Cow position: | chr29:45626500-45626280 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 118, 30 |
| Conread position: | 5-187 |
| Cow position: | chr29:2485867-2486056 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 10, 15 |
| Conread position: | 5-220 |
| Cow position: | chr29:1576820-1577039 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 124, 33 |
| Conread position: | 5-220 |
| Cow position: | chr29:4864480-4864267 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 128, 29 |
| Conread position: | 7-182 |
| Cow position: | chr29:14839175-14838995 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 110, 27 |
| Conread position: | 7-220 |
| Cow position: | chr29:10452661-10452880 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 110, 27 |
| Conread position: | 7-220 |
| Cow position: | chr29:10820560-10820780 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 115, 27 |
| Conread position: | 7-220 |
| Cow position: | chr29:14208405-14208621 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 112, 27 |
| Conread position: | 7-222 |
| Cow position: | chr29:32962469-32962247 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 126, 27 |
| Conread position: | 7-225 |
| Cow position: | chr29:13027377-13027152 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 125, 30 |
| Conread position: | 10-131 |
| Cow position: | chr29:36634199-36634318 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 10-185 |
| Cow position: | chr29:32732252-32732071 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 122, 24 |
| Conread position: | 10-220 |
| Cow position: | chr29:2184258-2184036 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 120, 24 |
| Conread position: | 10-220 |
| Cow position: | chr29:11365172-11364978 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 10-220 |
| Cow position: | chr29:15943505-15943288 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 123, 24 |
| Conread position: | 10-225 |
| Cow position: | chr29:14081752-14081977 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 11-196 |
| Cow position: | chr29:40156895-40156702 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 111, 27 |
| Conread position: | 11-219 |
| Cow position: | chr29:35300070-35299856 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 120, 27 |
| Conread position: | 11-220 |
| Cow position: | chr29:15966403-15966619 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 111, 27 |
| Conread position: | 11-220 |
| Cow position: | chr29:21429709-21429925 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 167 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 122, 27 |
| Conread position: | 11-220 |
| Cow position: | chr29:21546603-21546808 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 166 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 57, 23 |
| Conread position: | 11-220 |
| Cow position: | chr29:40471816-40471600 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 111, 27 |
| Conread position: | 11-221 |
| Cow position: | chr29:42807142-42806925 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 111, 23 |
| Conread position: | 11-223 |
| Cow position: | chr29:1478603-1478384 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 122, 37 |
| Conread position: | 13-131 |
| Cow position: | chr29:10205622-10205504 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 22, 69 |
| Conread position: | 13-220 |
| Cow position: | chr29:27259963-27260180 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 124, 21 |
| Conread position: | 13-220 |
| Cow position: | chr29:34737543-34737758 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 31, 21 |
| Conread position: | 14-233 |
| Cow position: | chr29:25479800-25479574 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 105, 7 |
| Conread position: | 17-188 |
| Cow position: | chr29:27310507-27310685 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 113, 20 |
| Conread position: | 17-191 |
| Cow position: | chr29:25929362-25929545 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 17-220 |
| Cow position: | chr29:13585361-13585151 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 105, 17 |
| Conread position: | 17-220 |
| Cow position: | chr29:40418525-40418735 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 12, 55 |
| Conread position: | 19-220 |
| Cow position: | chr29:799545-799754 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 114, 15 |
| Conread position: | 19-220 |
| Cow position: | chr29:8511631-8511428 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 115, 18 |
| Conread position: | 19-220 |
| Cow position: | chr29:21535769-21535973 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 5, 33 |
| Conread position: | 20-204 |
| Cow position: | chr29:34331286-34331478 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 20-220 |
| Cow position: | chr29:16347349-16347141 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 21-219 |
| Cow position: | chr29:15995241-15995446 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 93, 13 |
| Conread position: | 21-222 |
| Cow position: | chr29:29600041-29600242 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 16, 20 |
| Conread position: | 21-228 |
| Cow position: | chr29:4083372-4083577 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 115, 21 |
| Conread position: | 21-233 |
| Cow position: | chr29:23754692-23754909 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 112, 33 |
| Conread position: | 25-220 |
| Cow position: | chr29:30412852-30412653 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 108, 137 |
| Conread position: | 25-220 |
| Cow position: | chr29:43518065-43518259 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 106, 37 |
| Conread position: | 26-220 |
| Cow position: | chr29:19956460-19956262 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 102, 154 |
| Conread position: | 27-220 |
| Cow position: | chr29:22949761-22949960 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 93, 31 |
| Conread position: | 29-232 |
| Cow position: | chr29:2886542-2886745 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 95, 53 |
| Conread position: | 30-220 |
| Cow position: | chr29:45651417-45651616 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 31-220 |
| Cow position: | chr29:4518998-4518802 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 100, 139 |
| Conread position: | 36-220 |
| Cow position: | chr29:35002530-35002722 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 86, 145 |
| Conread position: | 43-212 |
| Cow position: | chr29:6216211-6216034 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 44-220 |
| Cow position: | chr29:5960952-5960771 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 79, 119 |
| Conread position: | 45-220 |
| Cow position: | chr29:13044531-13044707 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 87, 17 |
| Conread position: | 45-220 |
| Cow position: | chr29:32807499-32807316 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 45-222 |
| Cow position: | chr29:108154-107971 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 86, 113 |
| Conread position: | 45-222 |
| Cow position: | chr29:8892137-8892316 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 74, 132 |
| Conread position: | 45-230 |
| Cow position: | chr29:13076482-13076305 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 36, 69 |
| Conread position: | 46-220 |
| Cow position: | chr29:31123248-31123430 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 47-220 |
| Cow position: | chr29:18523312-18523493 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 55, 60 |
| Conread position: | 47-221 |
| Cow position: | chr29:13652213-13652045 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 50-220 |
| Cow position: | chr29:32352731-32352553 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 66-183 |
| Cow position: | chr29:31956826-31956701 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 66-220 |
| Cow position: | chr29:3712114-3711953 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 70, 123 |
| Conread position: | 66-220 |
| Cow position: | chr29:19656997-19656835 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 66-223 |
| Cow position: | chr29:32805672-32805507 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 81-220 |
| Cow position: | chr29:16596698-16596555 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 81-226 |
| Cow position: | chr29:35739635-35739788 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 84-220 |
| Cow position: | chr29:5389990-5390134 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 38, 0 |
Show alignments to all cow chromosomes.