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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8026L24.3
        

               
Conread position:
               
1-189
               

               
Cow position:
               
chr3:52451490-52451296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
133, 33
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr3:29578560-29578768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
120, 33
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr3:24530776-24530551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
132, 32
               

               
Conread position:
               
2-170
               

               
Cow position:
               
chr3:13311932-13312107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
120, 35
               

               
Conread position:
               
2-170
               

               
Cow position:
               
chr3:55454958-55455119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
14, 19
               

               
Conread position:
               
2-187
               

               
Cow position:
               
chr3:24455444-24455634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
128, 32
               

               
Conread position:
               
2-216
               

               
Cow position:
               
chr3:6838103-6837882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
120, 36
               

               
Conread position:
               
2-218
               

               
Cow position:
               
chr3:64317813-64317591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 32
               

               
Conread position:
               
2-218
               

               
Cow position:
               
chr3:76187604-76187383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
130, 31
               

               
Conread position:
               
2-220
               

               
Cow position:
               
chr3:28435625-28435850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
120, 36
               

               
Conread position:
               
2-220
               

               
Cow position:
               
chr3:29130169-29129945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
131, 32
               

               
Conread position:
               
2-220
               

               
Cow position:
               
chr3:31771204-31770990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
2-220
               

               
Cow position:
               
chr3:33326456-33326230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
128, 35
               

               
Conread position:
               
2-220
               

               
Cow position:
               
chr3:42993803-42994022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
112, 35
               

               
Conread position:
               
2-220
               

               
Cow position:
               
chr3:45977576-45977351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
130, 38
               

               
Conread position:
               
2-220
               

               
Cow position:
               
chr3:46224968-46224744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
131, 32
               

               
Conread position:
               
2-220
               

               
Cow position:
               
chr3:49463481-49463704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
131, 32
               

               
Conread position:
               
2-220
               

               
Cow position:
               
chr3:57481663-57481887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
120, 32
               

               
Conread position:
               
2-220
               

               
Cow position:
               
chr3:57554848-57554627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
131, 15
               

               
Conread position:
               
2-220
               

               
Cow position:
               
chr3:58034563-58034788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
130, 32
               

               
Conread position:
               
2-220
               

               
Cow position:
               
chr3:66829865-66830090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
131, 32
               

               
Conread position:
               
2-220
               

               
Cow position:
               
chr3:74852223-74852445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
130, 22
               

               
Conread position:
               
2-223
               

               
Cow position:
               
chr3:32326352-32326576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
130, 32
               

               
Conread position:
               
2-233
               

               
Cow position:
               
chr3:26596114-26595879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
129, 23
               

               
Conread position:
               
2-312
               

               
Cow position:
               
chr3:63202322-63202015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
32, 58
               

               
Conread position:
               
3-118
               

               
Cow position:
               
chr3:50204638-50204524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
3-119
               

               
Cow position:
               
chr3:42508136-42508251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
3-120
               

               
Cow position:
               
chr3:35918637-35918521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
3-120
               

               
Cow position:
               
chr3:37021337-37021451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
3-121
               

               
Cow position:
               
chr3:51235373-51235490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
3-131
               

               
Cow position:
               
chr3:302304-302177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
3-131
               

               
Cow position:
               
chr3:20475587-20475459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-131
               

               
Cow position:
               
chr3:41019241-41019368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
3-131
               

               
Cow position:
               
chr3:48272854-48272725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
10, 33
               

               
Conread position:
               
3-131
               

               
Cow position:
               
chr3:68273913-68273786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
3-136
               

               
Cow position:
               
chr3:47986512-47986382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
3-144
               

               
Cow position:
               
chr3:77466766-77466625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
129, 34
               

               
Conread position:
               
3-164
               

               
Cow position:
               
chr3:78520120-78519952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
129, 35
               

               
Conread position:
               
3-165
               

               
Cow position:
               
chr3:11384391-11384220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
3-166
               

               
Cow position:
               
chr3:13035423-13035593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
3-170
               

               
Cow position:
               
chr3:39856536-39856362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
112, 31
               

               
Conread position:
               
3-170
               

               
Cow position:
               
chr3:44537069-44537234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
130, 31
               

               
Conread position:
               
3-172
               

               
Cow position:
               
chr3:11417619-11417443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
3-181
               

               
Cow position:
               
chr3:34027802-34027987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
119, 31
               

               
Conread position:
               
3-182
               

               
Cow position:
               
chr3:44101118-44100935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
128, 31
               

               
Conread position:
               
3-184
               

               
Cow position:
               
chr3:54788155-54787971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
29, 47
               

               
Conread position:
               
3-184
               

               
Cow position:
               
chr3:65473503-65473315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
119, 31
               

               
Conread position:
               
3-190
               

               
Cow position:
               
chr3:30938569-30938379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
121, 34
               

               
Conread position:
               
3-191
               

               
Cow position:
               
chr3:38528745-38528933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
152, 31
               

               
Conread position:
               
3-191
               

               
Cow position:
               
chr3:67545527-67545716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
129, 31
               

               
Conread position:
               
3-191
               

               
Cow position:
               
chr3:83700247-83700441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
12, 17
               

               
Conread position:
               
3-197
               

               
Cow position:
               
chr3:70914190-70914393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
61, 31
               

               
Conread position:
               
3-206
               

               
Cow position:
               
chr3:45311865-45311656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
129, 31
               

               
Conread position:
               
3-206
               

               
Cow position:
               
chr3:62882433-62882224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
129, 31
               

               
Conread position:
               
3-207
               

               
Cow position:
               
chr3:36614156-36614367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
3-208
               

               
Cow position:
               
chr3:12749973-12749761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
114, 31
               

               
Conread position:
               
3-208
               

               
Cow position:
               
chr3:17937929-17938141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
129, 31
               

               
Conread position:
               
3-215
               

               
Cow position:
               
chr3:14452731-14452513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
119, 18
               

               
Conread position:
               
3-216
               

               
Cow position:
               
chr3:32220797-32220577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
119, 31
               

               
Conread position:
               
3-216
               

               
Cow position:
               
chr3:57456031-57455815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
129, 31
               

               
Conread position:
               
3-216
               

               
Cow position:
               
chr3:61677611-61677390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
129, 31
               

               
Conread position:
               
3-216
               

               
Cow position:
               
chr3:77225806-77225588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
129, 31
               

               
Conread position:
               
3-218
               

               
Cow position:
               
chr3:3552395-3552175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
129, 31
               

               
Conread position:
               
3-218
               

               
Cow position:
               
chr3:30615864-30616086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
130, 35
               

               
Conread position:
               
3-218
               

               
Cow position:
               
chr3:40826471-40826248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
68, 31
               

               
Conread position:
               
3-219
               

               
Cow position:
               
chr3:18353298-18353511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
12, 17
               

               
Conread position:
               
3-219
               

               
Cow position:
               
chr3:22724697-22724919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
88, 31
               

               
Conread position:
               
3-219
               

               
Cow position:
               
chr3:56485187-56485410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
130, 35
               

               
Conread position:
               
3-219
               

               
Cow position:
               
chr3:64875846-64875636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
3-219
               

               
Cow position:
               
chr3:65988994-65988773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
128, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:226803-227024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
86, 34
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:597182-596966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
121, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:823017-823242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
71, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:1033935-1033711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:1739800-1740024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:2365824-2366041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
158, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:2572600-2572376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:2707796-2708020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
120, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:2834466-2834690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:2866582-2866806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
129, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:2921330-2921110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
129, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:3653214-3653437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
129, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:3837520-3837736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
129, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:3984180-3983961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
129, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:5474612-5474387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
32, 39
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:6529065-6528841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
120, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:6714080-6713856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
130, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:6864733-6864516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
129, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:7155734-7155958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:7246031-7246255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
130, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:7476847-7477072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
120, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:10243734-10243510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
130, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:12665006-12664782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
128, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:12797978-12798202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:12986943-12987167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:13276209-13276432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
119, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:13723639-13723864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
71, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:14054346-14054122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
116, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:14284808-14284583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:14431416-14431634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
138, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:14680160-14679936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:15416539-15416315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:16225950-16225726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 40
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:18814579-18814355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
119, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:18862513-18862290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:19126347-19126122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
128, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:19753654-19753879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
119, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:19798079-19798303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
130, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:19881122-19880900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:19883543-19883319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
84, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:19947295-19947071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
130, 22
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:20379644-20379868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
120, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:20795366-20795142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:21004885-21004664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
120, 33
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:21179186-21179408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
121, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:21593357-21593133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
129, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:22084358-22084575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 40
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:22338981-22338757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
129, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:23170121-23170344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
130, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:23204601-23204824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
120, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:23287262-23287486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
120, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:26742800-26743020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:26993199-26992975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
128, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:27245617-27245839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
119, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:27783233-27783451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
131, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:28094210-28093985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
119, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:29574053-29574277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
130, 45
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:31021755-31021532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
130, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:31121064-31121294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
77, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:31396446-31396246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:32412616-32412840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:32490640-32490864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:32619969-32620192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
130, 38
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:34504050-34504274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
130, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:35342723-35342499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:35612227-35612003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
128, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:36170862-36171085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
98, 34
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:36874988-36875218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
93, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:37280468-37280244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:38095972-38095748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
114, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:38869646-38869422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
124, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:40048962-40048738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
130, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:40285243-40285467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
119, 37
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:40296912-40297136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
10, 23
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:40337073-40337294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
130, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:41207524-41207748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
119, 43
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:42747649-42747873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:42977511-42977735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
118, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:43084315-43084091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
130, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:43525666-43525890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:46505841-46505617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
129, 37
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:46858211-46858434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:47272807-47273031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
129, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:48603324-48603100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
119, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:48846079-48845855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:49336270-49336047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
130, 37
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:49542128-49542352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
119, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:49605368-49605590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
130, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:49611135-49611359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
130, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:49999209-49998987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
119, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:50921112-50920885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
119, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:50941646-50941422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
129, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:52150213-52150437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:53047720-53047932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
70, 15
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:53880194-53880418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
113, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:54569101-54568877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
128, 34
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:54654102-54654332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
123, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:56297457-56297233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
130, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:63000285-63000509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
127, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:63148566-63148787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
128, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:63276791-63277004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
118, 37
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:64653741-64653518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:65178083-65177859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
129, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:66623285-66623062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
120, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:66888123-66888347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
129, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:66968806-66969030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
32, 39
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:68510263-68510487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:68696892-68697116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
130, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:68870677-68870901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:69421396-69421616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
128, 18
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:69930761-69930985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
129, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:70322965-70323185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
111, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:72633146-72632919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
120, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:72669489-72669713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
129, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:73636954-73636730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
119, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:74060542-74060323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
119, 38
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:74848091-74848316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
101, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:75038769-75038993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
119, 34
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:76864504-76864280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
130, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:77272723-77272947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
128, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:77426767-77426552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
120, 35
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:77550042-77549823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
125, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:77706898-77706675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
120, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:78024363-78024581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
120, 30
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:81101151-81100929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
130, 31
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr3:83767326-83767102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
3-221
               

               
Cow position:
               
chr3:33691977-33692187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
3-221
               

               
Cow position:
               
chr3:61277634-61277415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
128, 34
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr3:12676568-12676782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
121, 31
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr3:15988060-15987834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
132, 31
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr3:16293836-16294063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
130, 37
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr3:43190197-43190423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
130, 31
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr3:49134464-49134688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
120, 31
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr3:50346892-50346666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
41, 31
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr3:56645258-56645483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
119, 31
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr3:61173567-61173341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
129, 31
               

               
Conread position:
               
3-223
               

               
Cow position:
               
chr3:2852401-2852635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
94, 30
               

               
Conread position:
               
3-223
               

               
Cow position:
               
chr3:49253584-49253359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
120, 34
               

               
Conread position:
               
3-225
               

               
Cow position:
               
chr3:2790824-2790595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
120, 31
               

               
Conread position:
               
3-225
               

               
Cow position:
               
chr3:24638484-24638255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
20, 34
               

               
Conread position:
               
3-225
               

               
Cow position:
               
chr3:58950534-58950306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
130, 34
               

               
Conread position:
               
3-225
               

               
Cow position:
               
chr3:77084488-77084715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
129, 34
               

               
Conread position:
               
3-235
               

               
Cow position:
               
chr3:42846421-42846187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
119, 31
               

               
Conread position:
               
3-238
               

               
Cow position:
               
chr3:26566853-26566617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
34, 181
               

               
Conread position:
               
3-239
               

               
Cow position:
               
chr3:72175233-72175473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr3:40520867-40521113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
118, 35
               

               
Conread position:
               
4-219
               

               
Cow position:
               
chr3:10371068-10370851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
4-220
               

               
Cow position:
               
chr3:77726532-77726324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
4-222
               

               
Cow position:
               
chr3:80306552-80306329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
127, 33
               

               
Conread position:
               
5-206
               

               
Cow position:
               
chr3:27547377-27547583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
108, 29
               

               
Conread position:
               
5-218
               

               
Cow position:
               
chr3:37627962-37627746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
127, 29
               

               
Conread position:
               
5-220
               

               
Cow position:
               
chr3:38251922-38251699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
107, 29
               

               
Conread position:
               
5-220
               

               
Cow position:
               
chr3:40101780-40101999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
127, 29
               

               
Conread position:
               
5-220
               

               
Cow position:
               
chr3:54087293-54087522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
5-220
               

               
Cow position:
               
chr3:56102812-56102590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
112, 29
               

               
Conread position:
               
5-220
               

               
Cow position:
               
chr3:59332530-59332310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
128, 29
               

               
Conread position:
               
5-220
               

               
Cow position:
               
chr3:63736459-63736238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
128, 21
               

               
Conread position:
               
5-220
               

               
Cow position:
               
chr3:80930183-80930403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
126, 32
               

               
Conread position:
               
5-222
               

               
Cow position:
               
chr3:39555516-39555740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
10, 15
               

               
Conread position:
               
5-222
               

               
Cow position:
               
chr3:55108518-55108738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
125, 29
               

               
Conread position:
               
5-225
               

               
Cow position:
               
chr3:34087127-34087351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
109, 29
               

               
Conread position:
               
6-220
               

               
Cow position:
               
chr3:6896896-6896692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
7-120
               

               
Cow position:
               
chr3:60185114-60185226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
7-128
               

               
Cow position:
               
chr3:22281402-22281522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
7-131
               

               
Cow position:
               
chr3:34557301-34557424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
7-131
               

               
Cow position:
               
chr3:39327617-39327494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
7-131
               

               
Cow position:
               
chr3:46136005-46136128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
7-191
               

               
Cow position:
               
chr3:2904374-2904559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
118, 17
               

               
Conread position:
               
7-220
               

               
Cow position:
               
chr3:5445843-5446063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
126, 27
               

               
Conread position:
               
7-220
               

               
Cow position:
               
chr3:5497365-5497583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
125, 27
               

               
Conread position:
               
7-220
               

               
Cow position:
               
chr3:5951547-5951767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
109, 30
               

               
Conread position:
               
7-220
               

               
Cow position:
               
chr3:18759353-18759568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
125, 27
               

               
Conread position:
               
7-220
               

               
Cow position:
               
chr3:19795153-19795373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
126, 27
               

               
Conread position:
               
7-220
               

               
Cow position:
               
chr3:33269300-33269087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
120, 27
               

               
Conread position:
               
7-220
               

               
Cow position:
               
chr3:45184914-45185133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
123, 31
               

               
Conread position:
               
7-220
               

               
Cow position:
               
chr3:53518905-53518685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
115, 27
               

               
Conread position:
               
7-220
               

               
Cow position:
               
chr3:55374154-55373939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
85, 27
               

               
Conread position:
               
7-220
               

               
Cow position:
               
chr3:56148361-56148139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
126, 27
               

               
Conread position:
               
7-220
               

               
Cow position:
               
chr3:56336889-56337105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
115, 32
               

               
Conread position:
               
7-220
               

               
Cow position:
               
chr3:64376642-64376860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
115, 27
               

               
Conread position:
               
7-222
               

               
Cow position:
               
chr3:29581730-29581508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
126, 27
               

               
Conread position:
               
9-220
               

               
Cow position:
               
chr3:31418603-31418384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
26, 75
               

               
Conread position:
               
10-204
               

               
Cow position:
               
chr3:14258810-14258611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
120, 15
               

               
Conread position:
               
10-206
               

               
Cow position:
               
chr3:35885055-35885251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
69, 24
               

               
Conread position:
               
10-216
               

               
Cow position:
               
chr3:4030819-4030608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
123, 27
               

               
Conread position:
               
10-220
               

               
Cow position:
               
chr3:523181-522970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
120, 8
               

               
Conread position:
               
10-220
               

               
Cow position:
               
chr3:7856492-7856274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
125, 150
               

               
Conread position:
               
10-220
               

               
Cow position:
               
chr3:25689722-25689504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
10-220
               

               
Cow position:
               
chr3:49429844-49429629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
122, 24
               

               
Conread position:
               
10-220
               

               
Cow position:
               
chr3:57742581-57742368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
122, 15
               

               
Conread position:
               
10-220
               

               
Cow position:
               
chr3:63238964-63239164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
10-220
               

               
Cow position:
               
chr3:79593211-79592994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
123, 143
               

               
Conread position:
               
10-222
               

               
Cow position:
               
chr3:18886525-18886312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
116, 27
               

               
Conread position:
               
10-222
               

               
Cow position:
               
chr3:53388533-53388754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
25, 202
               

               
Conread position:
               
11-132
               

               
Cow position:
               
chr3:36121240-36121120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
11-215
               

               
Cow position:
               
chr3:40344299-40344088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
122, 26
               

               
Conread position:
               
11-218
               

               
Cow position:
               
chr3:47078549-47078763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
111, 35
               

               
Conread position:
               
11-219
               

               
Cow position:
               
chr3:44926879-44926665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
111, 27
               

               
Conread position:
               
11-220
               

               
Cow position:
               
chr3:9404169-9404385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
5, 11
               

               
Conread position:
               
11-220
               

               
Cow position:
               
chr3:19941956-19941740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
111, 23
               

               
Conread position:
               
11-220
               

               
Cow position:
               
chr3:24265267-24265051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
111, 27
               

               
Conread position:
               
11-220
               

               
Cow position:
               
chr3:34015407-34015191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
111, 27
               

               
Conread position:
               
11-220
               

               
Cow position:
               
chr3:37893896-37893682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
124, 27
               

               
Conread position:
               
11-220
               

               
Cow position:
               
chr3:37972099-37971892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
119, 27
               

               
Conread position:
               
11-220
               

               
Cow position:
               
chr3:64025252-64025470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
89, 27
               

               
Conread position:
               
11-220
               

               
Cow position:
               
chr3:68717645-68717860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
121, 27
               

               
Conread position:
               
11-220
               

               
Cow position:
               
chr3:68889507-68889723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
111, 27
               

               
Conread position:
               
11-222
               

               
Cow position:
               
chr3:41315141-41314925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
122, 10
               

               
Conread position:
               
11-235
               

               
Cow position:
               
chr3:60178035-60178259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
109, 27
               

               
Conread position:
               
13-220
               

               
Cow position:
               
chr3:3790670-3790459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
20, 8
               

               
Conread position:
               
13-220
               

               
Cow position:
               
chr3:23010435-23010221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
110, 21
               

               
Conread position:
               
13-220
               

               
Cow position:
               
chr3:37659047-37658826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
67, 25
               

               
Conread position:
               
13-220
               

               
Cow position:
               
chr3:45568273-45568060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
65, 21
               

               
Conread position:
               
13-220
               

               
Cow position:
               
chr3:45691975-45692176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
14-219
               

               
Cow position:
               
chr3:56719265-56719476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
119, 5
               

               
Conread position:
               
14-220
               

               
Cow position:
               
chr3:20602796-20603003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
126, 5
               

               
Conread position:
               
14-220
               

               
Cow position:
               
chr3:27223109-27222897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
119, 5
               

               
Conread position:
               
14-220
               

               
Cow position:
               
chr3:27866719-27866507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
44, 20
               

               
Conread position:
               
14-220
               

               
Cow position:
               
chr3:29325203-29324991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
118, 5
               

               
Conread position:
               
14-220
               

               
Cow position:
               
chr3:63219001-63218803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
89, 5
               

               
Conread position:
               
14-220
               

               
Cow position:
               
chr3:74850086-74850296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
74, 5
               

               
Conread position:
               
16-221
               

               
Cow position:
               
chr3:48096027-48096237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
100, 18
               

               
Conread position:
               
17-169
               

               
Cow position:
               
chr3:35508910-35508751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
114, 20
               

               
Conread position:
               
17-205
               

               
Cow position:
               
chr3:57900070-57899873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
114, 20
               

               
Conread position:
               
17-208
               

               
Cow position:
               
chr3:52689815-52689614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
115, 20
               

               
Conread position:
               
17-217
               

               
Cow position:
               
chr3:31934279-31934481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
114, 17
               

               
Conread position:
               
17-220
               

               
Cow position:
               
chr3:26751127-26751337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
114, 20
               

               
Conread position:
               
17-220
               

               
Cow position:
               
chr3:41083222-41083012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
116, 21
               

               
Conread position:
               
17-220
               

               
Cow position:
               
chr3:48240311-48240103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
119, 17
               

               
Conread position:
               
18-208
               

               
Cow position:
               
chr3:66736507-66736704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
112, 16
               

               
Conread position:
               
18-220
               

               
Cow position:
               
chr3:6875216-6875424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
115, 16
               

               
Conread position:
               
18-220
               

               
Cow position:
               
chr3:53414092-53413885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
103, 19
               

               
Conread position:
               
18-220
               

               
Cow position:
               
chr3:56101327-56101126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
71, 16
               

               
Conread position:
               
19-220
               

               
Cow position:
               
chr3:19108617-19108413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
117, 18
               

               
Conread position:
               
19-220
               

               
Cow position:
               
chr3:24262777-24262979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
122, 26
               

               
Conread position:
               
19-220
               

               
Cow position:
               
chr3:24443038-24443245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
103, 15
               

               
Conread position:
               
19-228
               

               
Cow position:
               
chr3:72105597-72105821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
20-220
               

               
Cow position:
               
chr3:36594879-36594672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
102, 18
               

               
Conread position:
               
21-183
               

               
Cow position:
               
chr3:77581661-77581493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
102, 13
               

               
Conread position:
               
21-202
               

               
Cow position:
               
chr3:15570493-15570311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
134, 16
               

               
Conread position:
               
21-205
               

               
Cow position:
               
chr3:944749-944559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
112, 16
               

               
Conread position:
               
21-219
               

               
Cow position:
               
chr3:52726244-52726438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
129, 16
               

               
Conread position:
               
21-220
               

               
Cow position:
               
chr3:6688874-6688662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
21-222
               

               
Cow position:
               
chr3:14466822-14467031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
62, 169
               

               
Conread position:
               
21-222
               

               
Cow position:
               
chr3:51848331-51848122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
15, 25
               

               
Conread position:
               
21-227
               

               
Cow position:
               
chr3:70096895-70097104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
113, 38
               

               
Conread position:
               
21-244
               

               
Cow position:
               
chr3:58953211-58952983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
84, 16
               

               
Conread position:
               
22-169
               

               
Cow position:
               
chr3:13115383-13115536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
100, 12
               

               
Conread position:
               
22-216
               

               
Cow position:
               
chr3:1483084-1482883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
108, 59
               

               
Conread position:
               
22-220
               

               
Cow position:
               
chr3:72863987-72864188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
104, 15
               

               
Conread position:
               
22-228
               

               
Cow position:
               
chr3:20781368-20781585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
111, 37
               

               
Conread position:
               
25-220
               

               
Cow position:
               
chr3:26532947-26533146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
107, 161
               

               
Conread position:
               
25-224
               

               
Cow position:
               
chr3:60143071-60142865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
108, 164
               

               
Conread position:
               
26-148
               

               
Cow position:
               
chr3:25056740-25056616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
26-220
               

               
Cow position:
               
chr3:29644401-29644207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
87, 36
               

               
Conread position:
               
27-205
               

               
Cow position:
               
chr3:63688839-63689026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
27-220
               

               
Cow position:
               
chr3:3845917-3846108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
53, 65
               

               
Conread position:
               
27-220
               

               
Cow position:
               
chr3:19831102-19831304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 57
               

               
Conread position:
               
27-220
               

               
Cow position:
               
chr3:27921501-27921301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
106, 58
               

               
Conread position:
               
27-222
               

               
Cow position:
               
chr3:23941388-23941588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
105, 153
               

               
Conread position:
               
27-222
               

               
Cow position:
               
chr3:69433970-69434171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
84, 137
               

               
Conread position:
               
30-129
               

               
Cow position:
               
chr3:62882730-62882829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
30-190
               

               
Cow position:
               
chr3:36402652-36402482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
30-220
               

               
Cow position:
               
chr3:34347033-34347231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
30-225
               

               
Cow position:
               
chr3:24586184-24586385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
100, 32
               

               
Conread position:
               
36-220
               

               
Cow position:
               
chr3:5886540-5886348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
40-220
               

               
Cow position:
               
chr3:47341243-47341427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
43-176
               

               
Cow position:
               
chr3:44668342-44668483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
43-220
               

               
Cow position:
               
chr3:48034240-48034423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
89, 163
               

               
Conread position:
               
45-208
               

               
Cow position:
               
chr3:55894856-55894685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
45-220
               

               
Cow position:
               
chr3:31748685-31748508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
90, 33
               

               
Conread position:
               
45-220
               

               
Cow position:
               
chr3:82931656-82931480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
89, 45
               

               
Conread position:
               
45-222
               

               
Cow position:
               
chr3:64171260-64171077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
87, 108
               

               
Conread position:
               
45-222
               

               
Cow position:
               
chr3:71236107-71236283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
33, 54
               

               
Conread position:
               
45-223
               

               
Cow position:
               
chr3:46752652-46752466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
46-192
               

               
Cow position:
               
chr3:49907992-49908146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
46-222
               

               
Cow position:
               
chr3:3060883-3060706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
86, 77
               

               
Conread position:
               
47-220
               

               
Cow position:
               
chr3:46014650-46014832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
40, 161
               

               
Conread position:
               
50-220
               

               
Cow position:
               
chr3:18461112-18461289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
50-220
               

               
Cow position:
               
chr3:50461361-50461200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
50-220
               

               
Cow position:
               
chr3:57835564-57835742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
50-220
               

               
Cow position:
               
chr3:83289917-83290092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
82, 44
               

               
Conread position:
               
50-228
               

               
Cow position:
               
chr3:73304535-73304347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
51-206
               

               
Cow position:
               
chr3:48215453-48215610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
51-220
               

               
Cow position:
               
chr3:15663412-15663588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
55-225
               

               
Cow position:
               
chr3:66651307-66651481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
78, 95
               

               
Conread position:
               
60-230
               

               
Cow position:
               
chr3:64683992-64684164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
68, 7
               

               
Conread position:
               
62-220
               

               
Cow position:
               
chr3:20888639-20888805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
62-220
               

               
Cow position:
               
chr3:24573146-24573312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
71-220
               

               
Cow position:
               
chr3:55245345-55245188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
71-221
               

               
Cow position:
               
chr3:56963426-56963584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
76-229
               

               
Cow position:
               
chr3:62794270-62794433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
80-220
               

               
Cow position:
               
chr3:73416060-73415914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
50, 96
               

               
Conread position:
               
81-220
               

               
Cow position:
               
chr3:32703163-32703310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
82-220
               

               
Cow position:
               
chr3:34457871-34458017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
88-220
               

               
Cow position:
               
chr3:51339125-51339256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
229-337
               

               
Cow position:
               
chr3:29827990-29828100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
70, 18
               
Show alignments to all cow chromosomes.