Cow genome map

Conread name: Ss1.1-Pig4-TMW8026N13.3

Conread position: 2-281
Cow position:
Alignm length: 280
Alignm identity: 197
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 2-485
Cow position:
Alignm length: 492
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 53

Conread position: 2-611
Cow position:
Alignm length: 620
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 84

Conread position: 2-615
Cow position:
Alignm length: 617
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 68

Conread position: 2-800
Cow position:
Alignm length: 804
Alignm identity: 584
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 41

Conread position: 2-801
Cow position:
Alignm length: 803
Alignm identity: 566
Alignm E-value: 0
Alignm gaps (pig, cow): 577, 22

Conread position: 2-804
Cow position:
Alignm length: 808
Alignm identity: 561
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 51

Conread position: 4-514
Cow position:
Alignm length: 511
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 0

Conread position: 12-436
Cow position:
Alignm length: 434
Alignm identity: 272
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 54, 5

Conread position: 12-804
Cow position:
Alignm length: 808
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 18

Conread position: 20-798
Cow position:
Alignm length: 781
Alignm identity: 569
Alignm E-value: 0
Alignm gaps (pig, cow): 510, 84

Conread position: 21-590
Cow position:
Alignm length: 572
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 452

Conread position: 21-797
Cow position:
Alignm length: 782
Alignm identity: 564
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 22

Conread position: 21-798
Cow position:
Alignm length: 786
Alignm identity: 567
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 301

Conread position: 21-798
Cow position:
Alignm length: 780
Alignm identity: 570
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 155

Conread position: 22-373
Cow position:
Alignm length: 354
Alignm identity: 209
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 189, 214

Conread position: 22-466
Cow position:
Alignm length: 447
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 86

Conread position: 22-797
Cow position:
Alignm length: 778
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 557, 320

Conread position: 22-798
Cow position:
Alignm length: 778
Alignm identity: 566
Alignm E-value: 0
Alignm gaps (pig, cow): 551, 434

Conread position: 22-798
Cow position:
Alignm length: 781
Alignm identity: 580
Alignm E-value: 0
Alignm gaps (pig, cow): 441, 203

Conread position: 22-798
Cow position:
Alignm length: 778
Alignm identity: 575
Alignm E-value: 0
Alignm gaps (pig, cow): 557, 69

Conread position: 22-798
Cow position:
Alignm length: 779
Alignm identity: 567
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 131

Conread position: 22-798
Cow position:
Alignm length: 780
Alignm identity: 571
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 325

Conread position: 22-798
Cow position:
Alignm length: 778
Alignm identity: 564
Alignm E-value: 0
Alignm gaps (pig, cow): 331, 189

Conread position: 22-798
Cow position:
Alignm length: 778
Alignm identity: 565
Alignm E-value: 0
Alignm gaps (pig, cow): 557, 189

Conread position: 22-798
Cow position:
Alignm length: 780
Alignm identity: 570
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 68

Conread position: 22-798
Cow position:
Alignm length: 779
Alignm identity: 570
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 140

Conread position: 22-800
Cow position:
Alignm length: 780
Alignm identity: 570
Alignm E-value: 0
Alignm gaps (pig, cow): 557, 68

Conread position: 23-763
Cow position:
Alignm length: 746
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 556, 234

Conread position: 23-784
Cow position:
Alignm length: 763
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 554, 30

Conread position: 23-797
Cow position:
Alignm length: 777
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 556, 76

Conread position: 23-797
Cow position:
Alignm length: 777
Alignm identity: 584
Alignm E-value: 0
Alignm gaps (pig, cow): 556, 188

Conread position: 23-797
Cow position:
Alignm length: 781
Alignm identity: 564
Alignm E-value: 0
Alignm gaps (pig, cow): 450, 353

Conread position: 23-797
Cow position:
Alignm length: 776
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 771, 78

Conread position: 23-801
Cow position:
Alignm length: 782
Alignm identity: 571
Alignm E-value: 0
Alignm gaps (pig, cow): 554, 83

Conread position: 23-803
Cow position:
Alignm length: 798
Alignm identity: 574
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 377

Conread position: 27-337
Cow position:
Alignm length: 312
Alignm identity: 207
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 39, 25

Conread position: 28-777
Cow position:
Alignm length: 766
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 25

Conread position: 29-801
Cow position:
Alignm length: 789
Alignm identity: 573
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 221

Conread position: 37-545
Cow position:
Alignm length: 518
Alignm identity: 318
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 20, 10

Conread position: 38-323
Cow position:
Alignm length: 286
Alignm identity: 201
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 119, 0

Conread position: 38-723
Cow position:
Alignm length: 690
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 206

Conread position: 38-784
Cow position:
Alignm length: 748
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 539, 68

Conread position: 41-593
Cow position:
Alignm length: 557
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 28

Conread position: 41-797
Cow position:
Alignm length: 760
Alignm identity: 559
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 170

Conread position: 41-797
Cow position:
Alignm length: 761
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 538, 97

Conread position: 41-797
Cow position:
Alignm length: 759
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 538, 27

Conread position: 41-797
Cow position:
Alignm length: 760
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 536, 41

Conread position: 41-804
Cow position:
Alignm length: 775
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 28

Conread position: 44-801
Cow position:
Alignm length: 761
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 533, 32

Conread position: 51-248
Cow position:
Alignm length: 201
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 55-801
Cow position:
Alignm length: 749
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 522, 63

Conread position: 62-801
Cow position:
Alignm length: 741
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 520, 28

Conread position: 67-443
Cow position:
Alignm length: 381
Alignm identity: 249
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 73, 31

Conread position: 67-798
Cow position:
Alignm length: 740
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 45

Conread position: 69-646
Cow position:
Alignm length: 578
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 72-801
Cow position:
Alignm length: 734
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 181

Conread position: 75-667
Cow position:
Alignm length: 606
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 105

Conread position: 75-672
Cow position:
Alignm length: 602
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 33

Conread position: 76-801
Cow position:
Alignm length: 746
Alignm identity: 476
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 9, 44

Conread position: 82-799
Cow position:
Alignm length: 736
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 142

Conread position: 87-797
Cow position:
Alignm length: 714
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 46

Conread position: 92-798
Cow position:
Alignm length: 709
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 152

Conread position: 93-694
Cow position:
Alignm length: 604
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 158

Conread position: 93-798
Cow position:
Alignm length: 707
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 11

Conread position: 94-799
Cow position:
Alignm length: 711
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 229

Conread position: 97-801
Cow position:
Alignm length: 706
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 480, 118

Conread position: 100-336
Cow position:
Alignm length: 237
Alignm identity: 164
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 49, 0

Conread position: 101-786
Cow position:
Alignm length: 698
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 370, 61

Conread position: 109-785
Cow position:
Alignm length: 702
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 128

Conread position: 113-498
Cow position:
Alignm length: 387
Alignm identity: 269
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 329, 73

Conread position: 115-452
Cow position:
Alignm length: 340
Alignm identity: 221
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 13, 61

Conread position: 118-801
Cow position:
Alignm length: 690
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 358

Conread position: 119-794
Cow position:
Alignm length: 695
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 442, 84

Conread position: 123-392
Cow position:
Alignm length: 272
Alignm identity: 183
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 215, 36

Conread position: 128-778
Cow position:
Alignm length: 664
Alignm identity: 422
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 22, 17

Conread position: 137-458
Cow position:
Alignm length: 322
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 137-513
Cow position:
Alignm length: 377
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 149-770
Cow position:
Alignm length: 633
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 12

Conread position: 149-772
Cow position:
Alignm length: 627
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 197

Conread position: 160-728
Cow position:
Alignm length: 570
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 425, 11

Conread position: 171-780
Cow position:
Alignm length: 614
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 136

Conread position: 188-487
Cow position:
Alignm length: 307
Alignm identity: 195
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 70, 291

Conread position: 202-546
Cow position:
Alignm length: 347
Alignm identity: 217
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 195, 51

Conread position: 217-796
Cow position:
Alignm length: 590
Alignm identity: 364
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 113, 14

Conread position: 218-366
Cow position:
Alignm length: 150
Alignm identity: 120
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 24, 103

Conread position: 224-751
Cow position:
Alignm length: 532
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 36

Conread position: 244-766
Cow position:
Alignm length: 528
Alignm identity: 322
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 323, 92

Conread position: 245-798
Cow position:
Alignm length: 557
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 25

Conread position: 250-801
Cow position:
Alignm length: 566
Alignm identity: 351
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 283, 75

Conread position: 265-793
Cow position:
Alignm length: 532
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 207

Conread position: 278-799
Cow position:
Alignm length: 535
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 51

Conread position: 278-799
Cow position:
Alignm length: 532
Alignm identity: 351
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 228, 60

Conread position: 284-517
Cow position:
Alignm length: 238
Alignm identity: 173
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 13, 54

Conread position: 299-544
Cow position:
Alignm length: 246
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 0

Conread position: 305-778
Cow position:
Alignm length: 483
Alignm identity: 294
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 13, 121

Conread position: 308-797
Cow position:
Alignm length: 494
Alignm identity: 332
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 89, 79

Conread position: 319-801
Cow position:
Alignm length: 493
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 18

Conread position: 322-801
Cow position:
Alignm length: 481
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 106

Conread position: 324-757
Cow position:
Alignm length: 454
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 149

Conread position: 326-800
Cow position:
Alignm length: 480
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 83

Conread position: 330-648
Cow position:
Alignm length: 320
Alignm identity: 223
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 251, 83

Conread position: 334-801
Cow position:
Alignm length: 471
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 69

Conread position: 346-798
Cow position:
Alignm length: 458
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 127

Conread position: 347-781
Cow position:
Alignm length: 445
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 92

Conread position: 350-609
Cow position:
Alignm length: 262
Alignm identity: 187
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 188, 128

Conread position: 360-801
Cow position:
Alignm length: 443
Alignm identity: 299
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 168, 10

Conread position: 368-803
Cow position:
Alignm length: 440
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 106

Conread position: 369-778
Cow position:
Alignm length: 413
Alignm identity: 277
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 61, 111

Conread position: 375-513
Cow position:
Alignm length: 139
Alignm identity: 104
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 402-797
Cow position:
Alignm length: 398
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 71

Conread position: 417-804
Cow position:
Alignm length: 390
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 14

Conread position: 443-668
Cow position:
Alignm length: 231
Alignm identity: 176
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 80, 30

Conread position: 445-798
Cow position:
Alignm length: 357
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 28

Conread position: 448-801
Cow position:
Alignm length: 358
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 31

Conread position: 449-799
Cow position:
Alignm length: 357
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 25

Conread position: 449-801
Cow position:
Alignm length: 354
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 24

Conread position: 465-723
Cow position:
Alignm length: 261
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 8

Conread position: 466-667
Cow position:
Alignm length: 203
Alignm identity: 153
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 112, 7

Conread position: 472-597
Cow position:
Alignm length: 127
Alignm identity: 102
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 105, 0

Conread position: 472-801
Cow position:
Alignm length: 337
Alignm identity: 214
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 20, 100

Conread position: 482-801
Cow position:
Alignm length: 321
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 19

Conread position: 492-797
Cow position:
Alignm length: 319
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 498-800
Cow position:
Alignm length: 305
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 16

Conread position: 502-798
Cow position:
Alignm length: 299
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 141

Conread position: 505-801
Cow position:
Alignm length: 298
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 60

Conread position: 508-714
Cow position:
Alignm length: 208
Alignm identity: 161
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 73, 0

Conread position: 532-779
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 13, 238

Conread position: 532-801
Cow position:
Alignm length: 276
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 190

Conread position: 534-800
Cow position:
Alignm length: 269
Alignm identity: 185
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 11, 44

Conread position: 546-799
Cow position:
Alignm length: 258
Alignm identity: 180
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 80, 153

Conread position: 552-799
Cow position:
Alignm length: 253
Alignm identity: 169
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 27, 128

Conread position: 578-801
Cow position:
Alignm length: 224
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 579-771
Cow position:
Alignm length: 193
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 579-801
Cow position:
Alignm length: 223
Alignm identity: 161
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 128, 0

Conread position: 580-799
Cow position:
Alignm length: 220
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 581-760
Cow position:
Alignm length: 187
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 90, 32

Conread position: 589-798
Cow position:
Alignm length: 211
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 53

Conread position: 591-801
Cow position:
Alignm length: 214
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 181

Conread position: 591-801
Cow position:
Alignm length: 212
Alignm identity: 157
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 150, 169

Conread position: 599-798
Cow position:
Alignm length: 207
Alignm identity: 145
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 101

Conread position: 636-797
Cow position:
Alignm length: 163
Alignm identity: 129
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 158, 151

Conread position: 637-801
Cow position:
Alignm length: 165
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 644-804
Cow position:
Alignm length: 165
Alignm identity: 133
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 144, 0

Conread position: 657-801
Cow position:
Alignm length: 145
Alignm identity: 118
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 122, 0

Conread position: 668-798
Cow position:
Alignm length: 131
Alignm identity: 112
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 686-803
Cow position:
Alignm length: 118
Alignm identity: 96
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 697-798
Cow position:
Alignm length: 102
Alignm identity: 85
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.