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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8026N13.3
        

               
Conread position:
               
1-378
               

               
Cow position:
               
chr11:9220835-9220466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 83
               

               
Conread position:
               
1-704
               

               
Cow position:
               
chr11:31877359-31878041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
14, 53
               

               
Conread position:
               
1-757
               

               
Cow position:
               
chr11:44496398-44495666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
762
               

               
Alignm identity:
               
518
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
508, 10
               

               
Conread position:
               
1-800
               

               
Cow position:
               
chr11:8262516-8261732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
802
               

               
Alignm identity:
               
593
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
414, 29
               

               
Conread position:
               
2-325
               

               
Cow position:
               
chr11:24677249-24677555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
269, 74
               

               
Conread position:
               
2-403
               

               
Cow position:
               
chr11:12092943-12093329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
370, 66
               

               
Conread position:
               
2-514
               

               
Cow position:
               
chr11:76375280-76374794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
492, 34
               

               
Conread position:
               
2-798
               

               
Cow position:
               
chr11:53288287-53287486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
811
               

               
Alignm identity:
               
582
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 59
               

               
Conread position:
               
2-798
               

               
Cow position:
               
chr11:54208805-54209582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
800
               

               
Alignm identity:
               
575
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
507, 9
               

               
Conread position:
               
2-803
               

               
Cow position:
               
chr11:29669451-29668654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
806
               

               
Alignm identity:
               
587
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 105
               

               
Conread position:
               
4-804
               

               
Cow position:
               
chr11:42428514-42429311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
811
               

               
Alignm identity:
               
556
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 65
               

               
Conread position:
               
5-285
               

               
Cow position:
               
chr11:81853412-81853130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
23, 48
               

               
Conread position:
               
5-797
               

               
Cow position:
               
chr11:11987297-11988077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
797
               

               
Alignm identity:
               
584
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 429
               

               
Conread position:
               
6-798
               

               
Cow position:
               
chr11:17108507-17107716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
800
               

               
Alignm identity:
               
549
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 44
               

               
Conread position:
               
12-797
               

               
Cow position:
               
chr11:58133543-58134357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
819
               

               
Alignm identity:
               
592
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 331
               

               
Conread position:
               
17-803
               

               
Cow position:
               
chr11:72110770-72109988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
794
               

               
Alignm identity:
               
581
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 26
               

               
Conread position:
               
21-713
               

               
Cow position:
               
chr11:13581787-13581101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
708
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 20
               

               
Conread position:
               
21-800
               

               
Cow position:
               
chr11:28062888-28063648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
782
               

               
Alignm identity:
               
576
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
495, 69
               

               
Conread position:
               
22-261
               

               
Cow position:
               
chr11:9607466-9607236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
22-267
               

               
Cow position:
               
chr11:39799078-39798833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
189, 214
               

               
Conread position:
               
22-329
               

               
Cow position:
               
chr11:45110332-45110635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
179, 148
               

               
Conread position:
               
22-506
               

               
Cow position:
               
chr11:11126123-11126592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
9, 36
               

               
Conread position:
               
22-556
               

               
Cow position:
               
chr11:9736750-9736225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 0
               

               
Conread position:
               
22-797
               

               
Cow position:
               
chr11:37477920-37477149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
782
               

               
Alignm identity:
               
577
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 80
               

               
Conread position:
               
22-798
               

               
Cow position:
               
chr11:3492210-3492981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
782
               

               
Alignm identity:
               
579
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 193
               

               
Conread position:
               
22-798
               

               
Cow position:
               
chr11:4041864-4041106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
779
               

               
Alignm identity:
               
566
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 35
               

               
Conread position:
               
22-798
               

               
Cow position:
               
chr11:15982841-15983594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
779
               

               
Alignm identity:
               
564
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
517, 189
               

               
Conread position:
               
22-798
               

               
Cow position:
               
chr11:19065061-19064279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
784
               

               
Alignm identity:
               
577
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 456
               

               
Conread position:
               
22-798
               

               
Cow position:
               
chr11:20921551-20920775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
780
               

               
Alignm identity:
               
578
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 214
               

               
Conread position:
               
22-798
               

               
Cow position:
               
chr11:28230547-28229787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
779
               

               
Alignm identity:
               
572
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
557, 189
               

               
Conread position:
               
22-798
               

               
Cow position:
               
chr11:32450064-32450837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
778
               

               
Alignm identity:
               
577
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
555, 25
               

               
Conread position:
               
22-798
               

               
Cow position:
               
chr11:36744982-36744210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
779
               

               
Alignm identity:
               
568
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 205
               

               
Conread position:
               
22-798
               

               
Cow position:
               
chr11:67449690-67450468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
786
               

               
Alignm identity:
               
578
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 189
               

               
Conread position:
               
22-798
               

               
Cow position:
               
chr11:67847370-67846601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
779
               

               
Alignm identity:
               
576
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 69
               

               
Conread position:
               
23-313
               

               
Cow position:
               
chr11:53432573-53432283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
23-711
               

               
Cow position:
               
chr11:28072944-28073614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
84, 154
               

               
Conread position:
               
23-779
               

               
Cow position:
               
chr11:19103290-19102535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
758
               

               
Alignm identity:
               
549
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
554, 333
               

               
Conread position:
               
23-783
               

               
Cow position:
               
chr11:37093866-37093106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
763
               

               
Alignm identity:
               
556
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
554, 447
               

               
Conread position:
               
23-797
               

               
Cow position:
               
chr11:10846647-10847412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
777
               

               
Alignm identity:
               
570
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
554, 51
               

               
Conread position:
               
23-797
               

               
Cow position:
               
chr11:12359223-12358455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
777
               

               
Alignm identity:
               
571
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
560, 152
               

               
Conread position:
               
23-797
               

               
Cow position:
               
chr11:23876500-23877272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
777
               

               
Alignm identity:
               
562
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
473, 450
               

               
Conread position:
               
23-797
               

               
Cow position:
               
chr11:24392523-24393287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
777
               

               
Alignm identity:
               
554
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
556, 45
               

               
Conread position:
               
23-797
               

               
Cow position:
               
chr11:41171490-41170722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
777
               

               
Alignm identity:
               
564
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
556, 45
               

               
Conread position:
               
23-797
               

               
Cow position:
               
chr11:71328842-71329614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
780
               

               
Alignm identity:
               
578
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 126
               

               
Conread position:
               
27-375
               

               
Cow position:
               
chr11:21440828-21441160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
39, 20
               

               
Conread position:
               
27-690
               

               
Cow position:
               
chr11:24242647-24243320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
684
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 45
               

               
Conread position:
               
27-784
               

               
Cow position:
               
chr11:33044919-33044164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
770
               

               
Alignm identity:
               
505
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 25
               

               
Conread position:
               
27-798
               

               
Cow position:
               
chr11:52418593-52419358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
775
               

               
Alignm identity:
               
564
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 184
               

               
Conread position:
               
28-798
               

               
Cow position:
               
chr11:1496859-1496104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
774
               

               
Alignm identity:
               
565
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 177
               

               
Conread position:
               
34-618
               

               
Cow position:
               
chr11:3892071-3891476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
55, 20
               

               
Conread position:
               
38-784
               

               
Cow position:
               
chr11:28055383-28054644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
749
               

               
Alignm identity:
               
535
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 167
               

               
Conread position:
               
38-797
               

               
Cow position:
               
chr11:4028340-4027594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
762
               

               
Alignm identity:
               
538
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 392
               

               
Conread position:
               
38-797
               

               
Cow position:
               
chr11:26125717-26124961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
763
               

               
Alignm identity:
               
562
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
465, 283
               

               
Conread position:
               
38-797
               

               
Cow position:
               
chr11:38836206-38835461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
763
               

               
Alignm identity:
               
543
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
485, 435
               

               
Conread position:
               
38-797
               

               
Cow position:
               
chr11:43515422-43514660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
766
               

               
Alignm identity:
               
563
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 211
               

               
Conread position:
               
41-797
               

               
Cow position:
               
chr11:85394595-85393841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
759
               

               
Alignm identity:
               
564
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
538, 387
               

               
Conread position:
               
41-798
               

               
Cow position:
               
chr11:57628835-57628076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
762
               

               
Alignm identity:
               
561
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 433
               

               
Conread position:
               
42-779
               

               
Cow position:
               
chr11:77729310-77728569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
747
               

               
Alignm identity:
               
536
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 48
               

               
Conread position:
               
47-618
               

               
Cow position:
               
chr11:9581320-9580747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
51-351
               

               
Cow position:
               
chr11:17925341-17925042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
6, 127
               

               
Conread position:
               
53-798
               

               
Cow position:
               
chr11:8243930-8244674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
766
               

               
Alignm identity:
               
546
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 277
               

               
Conread position:
               
55-801
               

               
Cow position:
               
chr11:9660165-9659414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
760
               

               
Alignm identity:
               
554
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
524, 63
               

               
Conread position:
               
59-762
               

               
Cow position:
               
chr11:9158177-9157499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
518
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
518, 33
               

               
Conread position:
               
60-797
               

               
Cow position:
               
chr11:44158000-44157283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
742
               

               
Alignm identity:
               
534
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 20
               

               
Conread position:
               
67-500
               

               
Cow position:
               
chr11:7687155-7687589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 32
               

               
Conread position:
               
67-801
               

               
Cow position:
               
chr11:44895751-44895030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
755
               

               
Alignm identity:
               
490
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
432, 63
               

               
Conread position:
               
68-378
               

               
Cow position:
               
chr11:9977487-9977178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
43, 28
               

               
Conread position:
               
68-412
               

               
Cow position:
               
chr11:52462337-52462692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
262, 0
               

               
Conread position:
               
68-517
               

               
Cow position:
               
chr11:49076419-49076001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
69-743
               

               
Cow position:
               
chr11:10210717-10210048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
688
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 106
               

               
Conread position:
               
72-681
               

               
Cow position:
               
chr11:15998134-15998746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 296
               

               
Conread position:
               
78-661
               

               
Cow position:
               
chr11:81552969-81552401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
32, 21
               

               
Conread position:
               
78-761
               

               
Cow position:
               
chr11:43731676-43732337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
688
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 167
               

               
Conread position:
               
79-615
               

               
Cow position:
               
chr11:1076674-1077211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
48, 22
               

               
Conread position:
               
85-327
               

               
Cow position:
               
chr11:44507431-44507669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
85-404
               

               
Cow position:
               
chr11:65162277-65161961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
28, 20
               

               
Conread position:
               
86-488
               

               
Cow position:
               
chr11:19220506-19220106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
34, 19
               

               
Conread position:
               
91-445
               

               
Cow position:
               
chr11:40777467-40777113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 74
               

               
Conread position:
               
92-800
               

               
Cow position:
               
chr11:29234376-29233693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
713
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 126
               

               
Conread position:
               
92-801
               

               
Cow position:
               
chr11:87127108-87127811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 142
               

               
Conread position:
               
93-351
               

               
Cow position:
               
chr11:66725777-66726022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
97-797
               

               
Cow position:
               
chr11:34020179-34020860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
527
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
480, 147
               

               
Conread position:
               
99-797
               

               
Cow position:
               
chr11:8887878-8887188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
701
               

               
Alignm identity:
               
539
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
478, 304
               

               
Conread position:
               
100-743
               

               
Cow position:
               
chr11:45547788-45548388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
174, 62
               

               
Conread position:
               
100-794
               

               
Cow position:
               
chr11:75494472-75493778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
708
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
80, 40
               

               
Conread position:
               
101-513
               

               
Cow position:
               
chr11:30184014-30183605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
45, 7
               

               
Conread position:
               
101-778
               

               
Cow position:
               
chr11:50068008-50067345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
686
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
49, 44
               

               
Conread position:
               
101-796
               

               
Cow position:
               
chr11:49838828-49839494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
701
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
113, 99
               

               
Conread position:
               
102-738
               

               
Cow position:
               
chr11:3254010-3253390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
112, 100
               

               
Conread position:
               
104-334
               

               
Cow position:
               
chr11:3786042-3786270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
46, 36
               

               
Conread position:
               
104-389
               

               
Cow position:
               
chr11:33195335-33195057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
219, 0
               

               
Conread position:
               
104-798
               

               
Cow position:
               
chr11:63660307-63659618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
699
               

               
Alignm identity:
               
511
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 100
               

               
Conread position:
               
105-677
               

               
Cow position:
               
chr11:35257297-35256747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
88, 16
               

               
Conread position:
               
108-648
               

               
Cow position:
               
chr11:10218272-10217749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
469, 146
               

               
Conread position:
               
109-508
               

               
Cow position:
               
chr11:31414952-31414560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
110-607
               

               
Cow position:
               
chr11:49064459-49064951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 42
               

               
Conread position:
               
111-602
               

               
Cow position:
               
chr11:32071396-32071877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 127
               

               
Conread position:
               
111-756
               

               
Cow position:
               
chr11:30125950-30125335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
466, 84
               

               
Conread position:
               
112-456
               

               
Cow position:
               
chr11:43009513-43009854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
143, 30
               

               
Conread position:
               
112-728
               

               
Cow position:
               
chr11:21882813-21882207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
87, 31
               

               
Conread position:
               
114-770
               

               
Cow position:
               
chr11:14730229-14729581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
666
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 62
               

               
Conread position:
               
118-798
               

               
Cow position:
               
chr11:25526868-25527528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
687
               

               
Alignm identity:
               
510
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 201
               

               
Conread position:
               
125-798
               

               
Cow position:
               
chr11:21466381-21467047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
675
               

               
Alignm identity:
               
514
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
452, 90
               

               
Conread position:
               
128-472
               

               
Cow position:
               
chr11:7073162-7072831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
132-750
               

               
Cow position:
               
chr11:44861222-44860607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 73
               

               
Conread position:
               
132-798
               

               
Cow position:
               
chr11:37492339-37491676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
677
               

               
Alignm identity:
               
514
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 73
               

               
Conread position:
               
132-801
               

               
Cow position:
               
chr11:30304572-30305218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
685
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
447, 83
               

               
Conread position:
               
137-801
               

               
Cow position:
               
chr11:17220895-17220242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
492
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 74
               

               
Conread position:
               
157-480
               

               
Cow position:
               
chr11:17280905-17280593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
15, 87
               

               
Conread position:
               
167-774
               

               
Cow position:
               
chr11:36761435-36762030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 56
               

               
Conread position:
               
169-769
               

               
Cow position:
               
chr11:26566372-26565780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 63
               

               
Conread position:
               
189-798
               

               
Cow position:
               
chr11:12351701-12351095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
335, 171
               

               
Conread position:
               
220-761
               

               
Cow position:
               
chr11:32272309-32271783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
360, 7
               

               
Conread position:
               
221-619
               

               
Cow position:
               
chr11:28050387-28050003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 27
               

               
Conread position:
               
225-720
               

               
Cow position:
               
chr11:35130905-35131384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
16, 27
               

               
Conread position:
               
231-804
               

               
Cow position:
               
chr11:35228614-35228062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
24, 33
               

               
Conread position:
               
234-798
               

               
Cow position:
               
chr11:75919828-75920372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
345, 102
               

               
Conread position:
               
240-558
               

               
Cow position:
               
chr11:77235175-77235495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 10
               

               
Conread position:
               
250-800
               

               
Cow position:
               
chr11:44230555-44231085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
330, 82
               

               
Conread position:
               
266-788
               

               
Cow position:
               
chr11:7113040-7113554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 99
               

               
Conread position:
               
270-797
               

               
Cow position:
               
chr11:4271424-4270891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 59
               

               
Conread position:
               
274-642
               

               
Cow position:
               
chr11:49040188-49039833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
66, 108
               

               
Conread position:
               
274-798
               

               
Cow position:
               
chr11:9607128-9606608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 200
               

               
Conread position:
               
281-798
               

               
Cow position:
               
chr11:39833208-39833722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 42
               

               
Conread position:
               
291-798
               

               
Cow position:
               
chr11:61401573-61401081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 36
               

               
Conread position:
               
318-798
               

               
Cow position:
               
chr11:45110851-45111339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 158
               

               
Conread position:
               
320-711
               

               
Cow position:
               
chr11:20688174-20688545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
90, 24
               

               
Conread position:
               
327-797
               

               
Cow position:
               
chr11:73465613-73465146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
12, 82
               

               
Conread position:
               
335-801
               

               
Cow position:
               
chr11:8282586-8283048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 52
               

               
Conread position:
               
341-714
               

               
Cow position:
               
chr11:10049638-10050006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 54
               

               
Conread position:
               
346-737
               

               
Cow position:
               
chr11:81853104-81852723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 114
               

               
Conread position:
               
360-678
               

               
Cow position:
               
chr11:13067478-13067172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
219, 118
               

               
Conread position:
               
360-678
               

               
Cow position:
               
chr11:13162526-13162832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
219, 113
               

               
Conread position:
               
363-794
               

               
Cow position:
               
chr11:10089871-10090302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 65
               

               
Conread position:
               
389-804
               

               
Cow position:
               
chr11:66726027-66726451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 84
               

               
Conread position:
               
395-558
               

               
Cow position:
               
chr11:46962849-46962692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
407-794
               

               
Cow position:
               
chr11:5343638-5343251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 66
               

               
Conread position:
               
410-801
               

               
Cow position:
               
chr11:37065541-37065145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 63
               

               
Conread position:
               
414-641
               

               
Cow position:
               
chr11:62216512-62216290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
163, 58
               

               
Conread position:
               
415-723
               

               
Cow position:
               
chr11:65161971-65161663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
164, 58
               

               
Conread position:
               
419-766
               

               
Cow position:
               
chr11:30186893-30187227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
109, 9
               

               
Conread position:
               
421-698
               

               
Cow position:
               
chr11:32684882-32685154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 54
               

               
Conread position:
               
443-798
               

               
Cow position:
               
chr11:64045613-64045968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 30
               

               
Conread position:
               
448-754
               

               
Cow position:
               
chr11:47761310-47761017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
69, 25
               

               
Conread position:
               
450-800
               

               
Cow position:
               
chr11:40776920-40776568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 23
               

               
Conread position:
               
458-617
               

               
Cow position:
               
chr11:33195069-33194910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
81, 13
               

               
Conread position:
               
463-678
               

               
Cow position:
               
chr11:7688249-7688460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
116, 26
               

               
Conread position:
               
466-801
               

               
Cow position:
               
chr11:75874148-75873810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
119, 42
               

               
Conread position:
               
467-801
               

               
Cow position:
               
chr11:45655633-45655961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
63, 11
               

               
Conread position:
               
469-776
               

               
Cow position:
               
chr11:67867664-67867365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
12, 59
               

               
Conread position:
               
484-800
               

               
Cow position:
               
chr11:31414267-31413961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 32
               

               
Conread position:
               
489-798
               

               
Cow position:
               
chr11:73476968-73477278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
492-719
               

               
Cow position:
               
chr11:50837650-50837877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
36, 52
               

               
Conread position:
               
497-764
               

               
Cow position:
               
chr11:17280628-17280362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 51
               

               
Conread position:
               
498-733
               

               
Cow position:
               
chr11:3240317-3240550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
35, 131
               

               
Conread position:
               
498-784
               

               
Cow position:
               
chr11:52886822-52886547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 43
               

               
Conread position:
               
510-641
               

               
Cow position:
               
chr11:59370669-59370537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
67, 30
               

               
Conread position:
               
510-801
               

               
Cow position:
               
chr11:48084794-48085083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
22, 17
               

               
Conread position:
               
540-797
               

               
Cow position:
               
chr11:8519704-8519958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 141
               

               
Conread position:
               
543-801
               

               
Cow position:
               
chr11:43009896-43010154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
35, 99
               

               
Conread position:
               
550-781
               

               
Cow position:
               
chr11:9734926-9734694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 142
               

               
Conread position:
               
554-798
               

               
Cow position:
               
chr11:38505877-38505635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 11
               

               
Conread position:
               
563-773
               

               
Cow position:
               
chr11:18073687-18073471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
16, 127
               

               
Conread position:
               
591-801
               

               
Cow position:
               
chr11:4065471-4065256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
597-797
               

               
Cow position:
               
chr11:38132368-38132167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 126
               

               
Conread position:
               
599-778
               

               
Cow position:
               
chr11:30183533-30183363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
174, 36
               

               
Conread position:
               
599-798
               

               
Cow position:
               
chr11:12093328-12093528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 0
               

               
Conread position:
               
603-798
               

               
Cow position:
               
chr11:33194778-33194583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
606-781
               

               
Cow position:
               
chr11:77235493-77235668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
608-797
               

               
Cow position:
               
chr11:53432286-53432096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
186, 0
               

               
Conread position:
               
612-803
               

               
Cow position:
               
chr11:9220336-9220144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 0
               

               
Conread position:
               
623-801
               

               
Cow position:
               
chr11:7316668-7316843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
629-798
               

               
Cow position:
               
chr11:31925969-31926141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
52, 36
               

               
Conread position:
               
657-798
               

               
Cow position:
               
chr11:76374371-76374231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
680-800
               

               
Cow position:
               
chr11:59369460-59369580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
689-798
               

               
Cow position:
               
chr11:8267681-8267572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
698-798
               

               
Cow position:
               
chr11:256317-256217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.