Cow genome map

Conread name: Ss1.1-Pig4-TMW8026N13.3

Conread position: 2-798
Cow position:
Alignm length: 803
Alignm identity: 571
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 66

Conread position: 4-793
Cow position:
Alignm length: 793
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 29

Conread position: 5-803
Cow position:
Alignm length: 802
Alignm identity: 576
Alignm E-value: 0
Alignm gaps (pig, cow): 572, 52

Conread position: 19-797
Cow position:
Alignm length: 783
Alignm identity: 561
Alignm E-value: 0
Alignm gaps (pig, cow): 564, 310

Conread position: 22-293
Cow position:
Alignm length: 276
Alignm identity: 183
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 84, 201

Conread position: 22-714
Cow position:
Alignm length: 694
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 555, 312

Conread position: 22-797
Cow position:
Alignm length: 778
Alignm identity: 580
Alignm E-value: 0
Alignm gaps (pig, cow): 557, 69

Conread position: 22-798
Cow position:
Alignm length: 778
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 557, 277

Conread position: 22-798
Cow position:
Alignm length: 782
Alignm identity: 562
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 83

Conread position: 22-798
Cow position:
Alignm length: 780
Alignm identity: 567
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 214

Conread position: 22-798
Cow position:
Alignm length: 779
Alignm identity: 569
Alignm E-value: 0
Alignm gaps (pig, cow): 557, 312

Conread position: 22-798
Cow position:
Alignm length: 779
Alignm identity: 561
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 134

Conread position: 22-804
Cow position:
Alignm length: 791
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 510, 68

Conread position: 23-797
Cow position:
Alignm length: 778
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 554, 13

Conread position: 23-797
Cow position:
Alignm length: 779
Alignm identity: 562
Alignm E-value: 0
Alignm gaps (pig, cow): 322, 126

Conread position: 23-797
Cow position:
Alignm length: 779
Alignm identity: 573
Alignm E-value: 0
Alignm gaps (pig, cow): 367, 357

Conread position: 26-797
Cow position:
Alignm length: 784
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 26

Conread position: 30-710
Cow position:
Alignm length: 684
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 206

Conread position: 38-797
Cow position:
Alignm length: 762
Alignm identity: 561
Alignm E-value: 0
Alignm gaps (pig, cow): 541, 68

Conread position: 38-801
Cow position:
Alignm length: 770
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 139

Conread position: 38-803
Cow position:
Alignm length: 774
Alignm identity: 562
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 292

Conread position: 53-797
Cow position:
Alignm length: 747
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 526, 349

Conread position: 54-656
Cow position:
Alignm length: 626
Alignm identity: 381
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 40, 159

Conread position: 57-485
Cow position:
Alignm length: 430
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 189

Conread position: 68-378
Cow position:
Alignm length: 317
Alignm identity: 209
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 20, 260

Conread position: 68-747
Cow position:
Alignm length: 685
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 67

Conread position: 68-755
Cow position:
Alignm length: 699
Alignm identity: 433
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 184, 13

Conread position: 70-378
Cow position:
Alignm length: 309
Alignm identity: 202
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 26, 0

Conread position: 70-399
Cow position:
Alignm length: 332
Alignm identity: 228
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 43, 36

Conread position: 70-698
Cow position:
Alignm length: 643
Alignm identity: 423
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 18, 13

Conread position: 72-803
Cow position:
Alignm length: 740
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 20

Conread position: 82-782
Cow position:
Alignm length: 707
Alignm identity: 451
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 68, 19

Conread position: 86-786
Cow position:
Alignm length: 721
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 16

Conread position: 97-347
Cow position:
Alignm length: 264
Alignm identity: 187
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 115, 207

Conread position: 97-798
Cow position:
Alignm length: 715
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 85

Conread position: 100-426
Cow position:
Alignm length: 328
Alignm identity: 213
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 210, 34

Conread position: 100-803
Cow position:
Alignm length: 716
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 222

Conread position: 108-798
Cow position:
Alignm length: 693
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 10

Conread position: 115-798
Cow position:
Alignm length: 686
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 462, 357

Conread position: 116-708
Cow position:
Alignm length: 600
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 89

Conread position: 118-688
Cow position:
Alignm length: 578
Alignm identity: 379
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 150, 100

Conread position: 123-509
Cow position:
Alignm length: 387
Alignm identity: 251
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 122, 0

Conread position: 128-525
Cow position:
Alignm length: 398
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 128-798
Cow position:
Alignm length: 672
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 452, 116

Conread position: 145-781
Cow position:
Alignm length: 647
Alignm identity: 408
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 5, 121

Conread position: 148-801
Cow position:
Alignm length: 659
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 116

Conread position: 166-334
Cow position:
Alignm length: 170
Alignm identity: 123
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 34, 38

Conread position: 172-798
Cow position:
Alignm length: 649
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 14

Conread position: 198-616
Cow position:
Alignm length: 425
Alignm identity: 266
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 203, 57

Conread position: 228-784
Cow position:
Alignm length: 564
Alignm identity: 349
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 200, 63

Conread position: 245-431
Cow position:
Alignm length: 187
Alignm identity: 137
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 157, 0

Conread position: 272-702
Cow position:
Alignm length: 432
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 52

Conread position: 318-471
Cow position:
Alignm length: 154
Alignm identity: 114
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 318-798
Cow position:
Alignm length: 491
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 13

Conread position: 368-784
Cow position:
Alignm length: 421
Alignm identity: 281
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 69, 65

Conread position: 445-784
Cow position:
Alignm length: 343
Alignm identity: 237
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 91, 32

Conread position: 448-804
Cow position:
Alignm length: 365
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 186

Conread position: 493-775
Cow position:
Alignm length: 284
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 216

Conread position: 503-710
Cow position:
Alignm length: 210
Alignm identity: 156
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 76, 0

Conread position: 519-803
Cow position:
Alignm length: 288
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 277

Conread position: 541-798
Cow position:
Alignm length: 259
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 585-709
Cow position:
Alignm length: 125
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 596-798
Cow position:
Alignm length: 204
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 79

Conread position: 602-798
Cow position:
Alignm length: 197
Alignm identity: 149
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 98, 0

Conread position: 668-804
Cow position:
Alignm length: 137
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 683-798
Cow position:
Alignm length: 116
Alignm identity: 95
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 694-798
Cow position:
Alignm length: 105
Alignm identity: 90
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.