Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8026N13.3
        

               Conread position:
               1-800
               

               Cow position:
               
               

               Alignm length:
               803
               

               Alignm identity:
               600
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               540, 89
               

               Conread position:
               2-640
               

               Cow position:
               
               

               Alignm length:
               649
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 50
               

               Conread position:
               2-779
               

               Cow position:
               
               

               Alignm length:
               786
               

               Alignm identity:
               562
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 17
               

               Conread position:
               2-797
               

               Cow position:
               
               

               Alignm length:
               799
               

               Alignm identity:
               583
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               388, 17
               

               Conread position:
               2-798
               

               Cow position:
               
               

               Alignm length:
               809
               

               Alignm identity:
               577
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 51
               

               Conread position:
               2-800
               

               Cow position:
               
               

               Alignm length:
               800
               

               Alignm identity:
               589
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               290, 28
               

               Conread position:
               2-804
               

               Cow position:
               
               

               Alignm length:
               807
               

               Alignm identity:
               599
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 29
               

               Conread position:
               5-642
               

               Cow position:
               
               

               Alignm length:
               639
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 37
               

               Conread position:
               5-797
               

               Cow position:
               
               

               Alignm length:
               798
               

               Alignm identity:
               578
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 376
               

               Conread position:
               5-797
               

               Cow position:
               
               

               Alignm length:
               795
               

               Alignm identity:
               573
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               574, 40
               

               Conread position:
               5-797
               

               Cow position:
               
               

               Alignm length:
               806
               

               Alignm identity:
               595
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 11
               

               Conread position:
               5-798
               

               Cow position:
               
               

               Alignm length:
               799
               

               Alignm identity:
               571
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 237
               

               Conread position:
               12-430
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               246
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               11, 79
               

               Conread position:
               12-797
               

               Cow position:
               
               

               Alignm length:
               790
               

               Alignm identity:
               586
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 14
               

               Conread position:
               20-503
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               306
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               25, 16
               

               Conread position:
               22-563
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               533, 19
               

               Conread position:
               22-595
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 211
               

               Conread position:
               22-798
               

               Cow position:
               
               

               Alignm length:
               781
               

               Alignm identity:
               549
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 68
               

               Conread position:
               22-798
               

               Cow position:
               
               

               Alignm length:
               785
               

               Alignm identity:
               562
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 298
               

               Conread position:
               22-798
               

               Cow position:
               
               

               Alignm length:
               779
               

               Alignm identity:
               568
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 84
               

               Conread position:
               22-798
               

               Cow position:
               
               

               Alignm length:
               780
               

               Alignm identity:
               581
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 225
               

               Conread position:
               22-798
               

               Cow position:
               
               

               Alignm length:
               778
               

               Alignm identity:
               559
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               557, 189
               

               Conread position:
               22-798
               

               Cow position:
               
               

               Alignm length:
               781
               

               Alignm identity:
               580
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               433, 123
               

               Conread position:
               22-801
               

               Cow position:
               
               

               Alignm length:
               783
               

               Alignm identity:
               579
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 206
               

               Conread position:
               23-421
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               23-493
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               23-756
               

               Cow position:
               
               

               Alignm length:
               738
               

               Alignm identity:
               519
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 83
               

               Conread position:
               23-797
               

               Cow position:
               
               

               Alignm length:
               777
               

               Alignm identity:
               565
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               554, 405
               

               Conread position:
               27-801
               

               Cow position:
               
               

               Alignm length:
               787
               

               Alignm identity:
               503
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 28
               

               Conread position:
               28-797
               

               Cow position:
               
               

               Alignm length:
               772
               

               Alignm identity:
               557
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               551, 121
               

               Conread position:
               30-323
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               205
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               181, 206
               

               Conread position:
               38-803
               

               Cow position:
               
               

               Alignm length:
               769
               

               Alignm identity:
               561
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               541, 147
               

               Conread position:
               41-798
               

               Cow position:
               
               

               Alignm length:
               761
               

               Alignm identity:
               561
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               514, 121
               

               Conread position:
               43-798
               

               Cow position:
               
               

               Alignm length:
               758
               

               Alignm identity:
               556
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               534, 189
               

               Conread position:
               50-714
               

               Cow position:
               
               

               Alignm length:
               666
               

               Alignm identity:
               481
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               527, 421
               

               Conread position:
               55-798
               

               Cow position:
               
               

               Alignm length:
               759
               

               Alignm identity:
               560
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 301
               

               Conread position:
               56-801
               

               Cow position:
               
               

               Alignm length:
               768
               

               Alignm identity:
               475
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               38, 89
               

               Conread position:
               60-801
               

               Cow position:
               
               

               Alignm length:
               746
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 196
               

               Conread position:
               67-383
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               42, 84
               

               Conread position:
               69-526
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               299
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               357, 172
               

               Conread position:
               69-723
               

               Cow position:
               
               

               Alignm length:
               670
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 66
               

               Conread position:
               72-781
               

               Cow position:
               
               

               Alignm length:
               713
               

               Alignm identity:
               535
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 47
               

               Conread position:
               74-520
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               293
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               141, 7
               

               Conread position:
               87-800
               

               Cow position:
               
               

               Alignm length:
               730
               

               Alignm identity:
               545
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 146
               

               Conread position:
               92-541
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 94
               

               Conread position:
               97-607
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               480, 146
               

               Conread position:
               97-794
               

               Cow position:
               
               

               Alignm length:
               699
               

               Alignm identity:
               531
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               482, 153
               

               Conread position:
               97-798
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 58
               

               Conread position:
               97-798
               

               Cow position:
               
               

               Alignm length:
               703
               

               Alignm identity:
               534
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               482, 121
               

               Conread position:
               100-788
               

               Cow position:
               
               

               Alignm length:
               711
               

               Alignm identity:
               485
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 85
               

               Conread position:
               100-801
               

               Cow position:
               
               

               Alignm length:
               714
               

               Alignm identity:
               477
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 34
               

               Conread position:
               101-771
               

               Cow position:
               
               

               Alignm length:
               679
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 31
               

               Conread position:
               105-720
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 27
               

               Conread position:
               108-735
               

               Cow position:
               
               

               Alignm length:
               649
               

               Alignm identity:
               396
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               53, 139
               

               Conread position:
               108-797
               

               Cow position:
               
               

               Alignm length:
               696
               

               Alignm identity:
               432
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               106, 76
               

               Conread position:
               108-797
               

               Cow position:
               
               

               Alignm length:
               699
               

               Alignm identity:
               437
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               43, 37
               

               Conread position:
               108-801
               

               Cow position:
               
               

               Alignm length:
               695
               

               Alignm identity:
               527
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               471, 84
               

               Conread position:
               109-426
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 22
               

               Conread position:
               110-797
               

               Cow position:
               
               

               Alignm length:
               700
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 42
               

               Conread position:
               110-798
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 95
               

               Conread position:
               118-797
               

               Cow position:
               
               

               Alignm length:
               682
               

               Alignm identity:
               485
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               459, 31
               

               Conread position:
               118-798
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               520
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 228
               

               Conread position:
               123-800
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               433
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               12, 21
               

               Conread position:
               137-471
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 208
               

               Conread position:
               161-754
               

               Cow position:
               
               

               Alignm length:
               596
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               424, 89
               

               Conread position:
               169-797
               

               Cow position:
               
               

               Alignm length:
               632
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               241, 63
               

               Conread position:
               171-798
               

               Cow position:
               
               

               Alignm length:
               632
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               368, 109
               

               Conread position:
               179-772
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 53
               

               Conread position:
               204-535
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               10, 24
               

               Conread position:
               219-758
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 46
               

               Conread position:
               227-447
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               89, 23
               

               Conread position:
               232-403
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               158, 148
               

               Conread position:
               243-696
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               307
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               49, 11
               

               Conread position:
               265-798
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               314, 69
               

               Conread position:
               270-708
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               283
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               229, 64
               

               Conread position:
               275-801
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               260, 27
               

               Conread position:
               311-753
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               268, 162
               

               Conread position:
               319-739
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               277
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               91, 35
               

               Conread position:
               321-729
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               261
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               34, 89
               

               Conread position:
               325-669
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               16, 95
               

               Conread position:
               325-708
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               258
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               84, 9
               

               Conread position:
               330-801
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               299
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               249, 65
               

               Conread position:
               336-803
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 101
               

               Conread position:
               383-612
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               194, 89
               

               Conread position:
               392-798
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 84
               

               Conread position:
               399-801
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 59
               

               Conread position:
               402-794
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 26
               

               Conread position:
               438-801
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               253
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               140, 35
               

               Conread position:
               439-801
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               35, 17
               

               Conread position:
               464-667
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               75, 9
               

               Conread position:
               472-771
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 15
               

               Conread position:
               487-789
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               58, 43
               

               Conread position:
               493-804
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 11
               

               Conread position:
               511-762
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               19, 37
               

               Conread position:
               519-804
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 67
               

               Conread position:
               531-797
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               533-784
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               30, 69
               

               Conread position:
               541-803
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               253, 209
               

               Conread position:
               549-779
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               34, 163
               

               Conread position:
               585-742
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               590-798
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               590-801
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               37, 19
               

               Conread position:
               592-798
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               620-801
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               30, 58
               

               Conread position:
               620-803
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               174, 0
               

               Conread position:
               625-798
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               147
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               24, 94
               

               Conread position:
               637-798
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               138
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               644-801
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               671-801
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               682-798
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.