Cow genome map

Conread name: Ss1.1-Pig4-TMW8026N13.3

Conread position: 1-339
Cow position:
Alignm length: 340
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 36

Conread position: 1-801
Cow position:
Alignm length: 804
Alignm identity: 581
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 107

Conread position: 1-801
Cow position:
Alignm length: 802
Alignm identity: 582
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 89

Conread position: 2-513
Cow position:
Alignm length: 517
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 331

Conread position: 2-789
Cow position:
Alignm length: 790
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 34

Conread position: 2-798
Cow position:
Alignm length: 804
Alignm identity: 576
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 39

Conread position: 2-798
Cow position:
Alignm length: 807
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 168

Conread position: 2-798
Cow position:
Alignm length: 827
Alignm identity: 570
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 56

Conread position: 12-797
Cow position:
Alignm length: 789
Alignm identity: 581
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 462

Conread position: 13-798
Cow position:
Alignm length: 798
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 91

Conread position: 17-798
Cow position:
Alignm length: 787
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 25

Conread position: 22-258
Cow position:
Alignm length: 237
Alignm identity: 151
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 22-258
Cow position:
Alignm length: 237
Alignm identity: 155
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 22-300
Cow position:
Alignm length: 279
Alignm identity: 188
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 189, 0

Conread position: 22-321
Cow position:
Alignm length: 300
Alignm identity: 205
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 68, 0

Conread position: 22-324
Cow position:
Alignm length: 303
Alignm identity: 204
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 104, 0

Conread position: 22-790
Cow position:
Alignm length: 770
Alignm identity: 562
Alignm E-value: 0
Alignm gaps (pig, cow): 557, 338

Conread position: 22-798
Cow position:
Alignm length: 778
Alignm identity: 575
Alignm E-value: 0
Alignm gaps (pig, cow): 557, 70

Conread position: 22-798
Cow position:
Alignm length: 779
Alignm identity: 576
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 84

Conread position: 22-798
Cow position:
Alignm length: 778
Alignm identity: 570
Alignm E-value: 0
Alignm gaps (pig, cow): 555, 189

Conread position: 23-797
Cow position:
Alignm length: 778
Alignm identity: 575
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 182

Conread position: 23-797
Cow position:
Alignm length: 778
Alignm identity: 555
Alignm E-value: 0
Alignm gaps (pig, cow): 367, 358

Conread position: 23-797
Cow position:
Alignm length: 782
Alignm identity: 571
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 60

Conread position: 23-797
Cow position:
Alignm length: 777
Alignm identity: 572
Alignm E-value: 0
Alignm gaps (pig, cow): 554, 218

Conread position: 23-797
Cow position:
Alignm length: 791
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 293

Conread position: 26-288
Cow position:
Alignm length: 264
Alignm identity: 176
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 212, 27

Conread position: 27-801
Cow position:
Alignm length: 790
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 25

Conread position: 30-797
Cow position:
Alignm length: 772
Alignm identity: 569
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 11

Conread position: 30-798
Cow position:
Alignm length: 770
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 547, 11

Conread position: 30-798
Cow position:
Alignm length: 783
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 60

Conread position: 41-628
Cow position:
Alignm length: 594
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 11

Conread position: 41-793
Cow position:
Alignm length: 755
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 432

Conread position: 41-797
Cow position:
Alignm length: 761
Alignm identity: 566
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 65

Conread position: 41-801
Cow position:
Alignm length: 762
Alignm identity: 576
Alignm E-value: 0
Alignm gaps (pig, cow): 532, 431

Conread position: 42-797
Cow position:
Alignm length: 758
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 537, 287

Conread position: 51-801
Cow position:
Alignm length: 754
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 386, 136

Conread position: 52-798
Cow position:
Alignm length: 770
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 45

Conread position: 52-799
Cow position:
Alignm length: 761
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 221

Conread position: 52-801
Cow position:
Alignm length: 765
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 21

Conread position: 58-504
Cow position:
Alignm length: 447
Alignm identity: 289
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 10, 0

Conread position: 58-800
Cow position:
Alignm length: 745
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 147

Conread position: 59-798
Cow position:
Alignm length: 742
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 413

Conread position: 63-645
Cow position:
Alignm length: 601
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 9

Conread position: 67-577
Cow position:
Alignm length: 513
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 41

Conread position: 67-798
Cow position:
Alignm length: 739
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 265

Conread position: 68-798
Cow position:
Alignm length: 742
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 76

Conread position: 68-798
Cow position:
Alignm length: 733
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 8

Conread position: 68-799
Cow position:
Alignm length: 765
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 37

Conread position: 69-799
Cow position:
Alignm length: 739
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 201

Conread position: 72-426
Cow position:
Alignm length: 357
Alignm identity: 236
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 189, 45

Conread position: 72-648
Cow position:
Alignm length: 581
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 45

Conread position: 76-726
Cow position:
Alignm length: 665
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 118

Conread position: 76-778
Cow position:
Alignm length: 708
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 51

Conread position: 79-648
Cow position:
Alignm length: 571
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 498, 11

Conread position: 80-798
Cow position:
Alignm length: 724
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 262

Conread position: 81-646
Cow position:
Alignm length: 573
Alignm identity: 354
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 47, 139

Conread position: 82-724
Cow position:
Alignm length: 645
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 97

Conread position: 83-798
Cow position:
Alignm length: 723
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 80

Conread position: 90-329
Cow position:
Alignm length: 248
Alignm identity: 175
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 13, 46

Conread position: 90-530
Cow position:
Alignm length: 447
Alignm identity: 289
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 126, 18

Conread position: 93-679
Cow position:
Alignm length: 588
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 484, 159

Conread position: 97-369
Cow position:
Alignm length: 273
Alignm identity: 197
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 202, 0

Conread position: 97-783
Cow position:
Alignm length: 707
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 11

Conread position: 97-801
Cow position:
Alignm length: 711
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 10

Conread position: 98-324
Cow position:
Alignm length: 229
Alignm identity: 156
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 63, 17

Conread position: 100-801
Cow position:
Alignm length: 709
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 20

Conread position: 101-650
Cow position:
Alignm length: 564
Alignm identity: 355
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 36, 40

Conread position: 101-789
Cow position:
Alignm length: 693
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 47

Conread position: 104-798
Cow position:
Alignm length: 696
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 475, 369

Conread position: 108-798
Cow position:
Alignm length: 704
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 308

Conread position: 110-400
Cow position:
Alignm length: 292
Alignm identity: 194
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 91, 37

Conread position: 110-797
Cow position:
Alignm length: 711
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 29

Conread position: 110-798
Cow position:
Alignm length: 691
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 87

Conread position: 112-800
Cow position:
Alignm length: 705
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 464, 65

Conread position: 118-800
Cow position:
Alignm length: 685
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 67

Conread position: 118-801
Cow position:
Alignm length: 686
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 249

Conread position: 119-801
Cow position:
Alignm length: 684
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 460, 206

Conread position: 122-798
Cow position:
Alignm length: 681
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 265

Conread position: 123-801
Cow position:
Alignm length: 683
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 52

Conread position: 125-801
Cow position:
Alignm length: 678
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 452, 303

Conread position: 136-801
Cow position:
Alignm length: 670
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 120

Conread position: 139-798
Cow position:
Alignm length: 662
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 46

Conread position: 140-378
Cow position:
Alignm length: 239
Alignm identity: 171
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 152-798
Cow position:
Alignm length: 648
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 427, 208

Conread position: 152-801
Cow position:
Alignm length: 653
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 66

Conread position: 170-726
Cow position:
Alignm length: 570
Alignm identity: 354
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 68, 82

Conread position: 174-798
Cow position:
Alignm length: 626
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 141

Conread position: 198-798
Cow position:
Alignm length: 602
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 387, 6

Conread position: 221-801
Cow position:
Alignm length: 587
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 357, 29

Conread position: 228-801
Cow position:
Alignm length: 579
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 55

Conread position: 235-801
Cow position:
Alignm length: 572
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 30

Conread position: 260-800
Cow position:
Alignm length: 548
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 73

Conread position: 264-575
Cow position:
Alignm length: 313
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 17

Conread position: 275-798
Cow position:
Alignm length: 525
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 53

Conread position: 279-424
Cow position:
Alignm length: 146
Alignm identity: 106
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 291-793
Cow position:
Alignm length: 503
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 0

Conread position: 303-801
Cow position:
Alignm length: 500
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 28

Conread position: 305-798
Cow position:
Alignm length: 495
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 168

Conread position: 310-798
Cow position:
Alignm length: 490
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 163

Conread position: 318-502
Cow position:
Alignm length: 186
Alignm identity: 136
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 11, 146

Conread position: 318-791
Cow position:
Alignm length: 477
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 155

Conread position: 318-798
Cow position:
Alignm length: 490
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 92

Conread position: 319-797
Cow position:
Alignm length: 481
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 109

Conread position: 321-801
Cow position:
Alignm length: 482
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 162

Conread position: 322-523
Cow position:
Alignm length: 203
Alignm identity: 144
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 63, 105

Conread position: 342-777
Cow position:
Alignm length: 437
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 86

Conread position: 347-648
Cow position:
Alignm length: 303
Alignm identity: 205
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 230, 32

Conread position: 374-798
Cow position:
Alignm length: 430
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 99

Conread position: 375-797
Cow position:
Alignm length: 425
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 56

Conread position: 395-801
Cow position:
Alignm length: 408
Alignm identity: 284
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 135, 13

Conread position: 406-794
Cow position:
Alignm length: 391
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 67

Conread position: 416-801
Cow position:
Alignm length: 387
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 57

Conread position: 417-779
Cow position:
Alignm length: 367
Alignm identity: 257
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 162, 56

Conread position: 438-783
Cow position:
Alignm length: 348
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 35

Conread position: 443-801
Cow position:
Alignm length: 362
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 30

Conread position: 467-794
Cow position:
Alignm length: 332
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 6

Conread position: 470-798
Cow position:
Alignm length: 333
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 85

Conread position: 472-798
Cow position:
Alignm length: 328
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 32

Conread position: 482-803
Cow position:
Alignm length: 328
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 139

Conread position: 495-798
Cow position:
Alignm length: 305
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 0

Conread position: 498-801
Cow position:
Alignm length: 306
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 30

Conread position: 540-697
Cow position:
Alignm length: 159
Alignm identity: 125
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 39, 64

Conread position: 541-801
Cow position:
Alignm length: 262
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 118

Conread position: 543-801
Cow position:
Alignm length: 260
Alignm identity: 183
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 35, 49

Conread position: 556-801
Cow position:
Alignm length: 247
Alignm identity: 178
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 22, 34

Conread position: 556-801
Cow position:
Alignm length: 246
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 561-758
Cow position:
Alignm length: 199
Alignm identity: 156
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 18, 0

Conread position: 578-797
Cow position:
Alignm length: 221
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 50

Conread position: 578-798
Cow position:
Alignm length: 221
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 578-804
Cow position:
Alignm length: 228
Alignm identity: 168
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 179, 8

Conread position: 591-801
Cow position:
Alignm length: 212
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 5

Conread position: 593-798
Cow position:
Alignm length: 208
Alignm identity: 161
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 12, 0

Conread position: 607-798
Cow position:
Alignm length: 195
Alignm identity: 153
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 5, 0

Conread position: 617-797
Cow position:
Alignm length: 182
Alignm identity: 143
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 177, 0

Conread position: 642-798
Cow position:
Alignm length: 157
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 151, 0

Conread position: 673-798
Cow position:
Alignm length: 126
Alignm identity: 104
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 673-798
Cow position:
Alignm length: 126
Alignm identity: 103
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 53, 0

Show alignments to all cow chromosomes.