Cow genome map

Conread name: Ss1.1-Pig4-TMW8026N13.3

Conread position: 2-416
Cow position:
Alignm length: 415
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 2-498
Cow position:
Alignm length: 498
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 15

Conread position: 2-500
Cow position:
Alignm length: 504
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 53

Conread position: 2-623
Cow position:
Alignm length: 632
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 345, 176

Conread position: 2-625
Cow position:
Alignm length: 625
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 575, 34

Conread position: 2-737
Cow position:
Alignm length: 741
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 50

Conread position: 2-762
Cow position:
Alignm length: 762
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 575, 74

Conread position: 2-800
Cow position:
Alignm length: 839
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 179

Conread position: 2-801
Cow position:
Alignm length: 803
Alignm identity: 592
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 88

Conread position: 3-798
Cow position:
Alignm length: 811
Alignm identity: 591
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 222

Conread position: 3-801
Cow position:
Alignm length: 801
Alignm identity: 582
Alignm E-value: 0
Alignm gaps (pig, cow): 387, 33

Conread position: 4-797
Cow position:
Alignm length: 799
Alignm identity: 577
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 378

Conread position: 5-784
Cow position:
Alignm length: 781
Alignm identity: 562
Alignm E-value: 0
Alignm gaps (pig, cow): 572, 94

Conread position: 12-797
Cow position:
Alignm length: 790
Alignm identity: 586
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 14

Conread position: 12-797
Cow position:
Alignm length: 788
Alignm identity: 575
Alignm E-value: 0
Alignm gaps (pig, cow): 567, 14

Conread position: 17-797
Cow position:
Alignm length: 810
Alignm identity: 582
Alignm E-value: 0
Alignm gaps (pig, cow): 419, 25

Conread position: 17-799
Cow position:
Alignm length: 787
Alignm identity: 581
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 92

Conread position: 20-801
Cow position:
Alignm length: 786
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 9

Conread position: 22-339
Cow position:
Alignm length: 319
Alignm identity: 217
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 193, 205

Conread position: 22-447
Cow position:
Alignm length: 426
Alignm identity: 251
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 143, 0

Conread position: 22-636
Cow position:
Alignm length: 620
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 56

Conread position: 22-678
Cow position:
Alignm length: 658
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 557, 39

Conread position: 22-786
Cow position:
Alignm length: 771
Alignm identity: 570
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 209

Conread position: 22-798
Cow position:
Alignm length: 778
Alignm identity: 559
Alignm E-value: 0
Alignm gaps (pig, cow): 557, 99

Conread position: 22-798
Cow position:
Alignm length: 781
Alignm identity: 573
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 128

Conread position: 22-801
Cow position:
Alignm length: 789
Alignm identity: 576
Alignm E-value: 0
Alignm gaps (pig, cow): 551, 450

Conread position: 23-299
Cow position:
Alignm length: 277
Alignm identity: 189
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 23-442
Cow position:
Alignm length: 420
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 23-797
Cow position:
Alignm length: 778
Alignm identity: 570
Alignm E-value: 0
Alignm gaps (pig, cow): 512, 337

Conread position: 23-797
Cow position:
Alignm length: 788
Alignm identity: 572
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 45

Conread position: 23-797
Cow position:
Alignm length: 788
Alignm identity: 572
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 55

Conread position: 23-797
Cow position:
Alignm length: 777
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 556, 33

Conread position: 32-738
Cow position:
Alignm length: 721
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 15

Conread position: 33-568
Cow position:
Alignm length: 544
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 32

Conread position: 36-797
Cow position:
Alignm length: 765
Alignm identity: 564
Alignm E-value: 0
Alignm gaps (pig, cow): 354, 56

Conread position: 38-797
Cow position:
Alignm length: 765
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 539, 296

Conread position: 38-797
Cow position:
Alignm length: 764
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 165

Conread position: 41-267
Cow position:
Alignm length: 228
Alignm identity: 153
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 7, 23

Conread position: 41-480
Cow position:
Alignm length: 442
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 164

Conread position: 41-554
Cow position:
Alignm length: 515
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 109

Conread position: 41-790
Cow position:
Alignm length: 752
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 538, 57

Conread position: 41-797
Cow position:
Alignm length: 759
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 542, 133

Conread position: 41-797
Cow position:
Alignm length: 759
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 538, 42

Conread position: 41-797
Cow position:
Alignm length: 759
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 538, 153

Conread position: 41-798
Cow position:
Alignm length: 760
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 536, 282

Conread position: 53-797
Cow position:
Alignm length: 753
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 589, 419

Conread position: 53-798
Cow position:
Alignm length: 750
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 29

Conread position: 55-296
Cow position:
Alignm length: 245
Alignm identity: 161
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 62-804
Cow position:
Alignm length: 752
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 183

Conread position: 67-403
Cow position:
Alignm length: 339
Alignm identity: 231
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 16, 35

Conread position: 67-509
Cow position:
Alignm length: 454
Alignm identity: 301
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 56, 137

Conread position: 67-514
Cow position:
Alignm length: 466
Alignm identity: 296
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 68, 157

Conread position: 68-801
Cow position:
Alignm length: 737
Alignm identity: 466
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 59, 22

Conread position: 68-801
Cow position:
Alignm length: 744
Alignm identity: 555
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 33

Conread position: 70-663
Cow position:
Alignm length: 598
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 106

Conread position: 72-448
Cow position:
Alignm length: 380
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 268

Conread position: 78-701
Cow position:
Alignm length: 642
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 12

Conread position: 78-793
Cow position:
Alignm length: 720
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 469, 14

Conread position: 79-383
Cow position:
Alignm length: 305
Alignm identity: 193
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 79-398
Cow position:
Alignm length: 323
Alignm identity: 214
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 137, 17

Conread position: 82-339
Cow position:
Alignm length: 259
Alignm identity: 188
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 48, 9

Conread position: 83-797
Cow position:
Alignm length: 719
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 17

Conread position: 92-596
Cow position:
Alignm length: 514
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 86

Conread position: 92-608
Cow position:
Alignm length: 519
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 110

Conread position: 92-634
Cow position:
Alignm length: 543
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 99-798
Cow position:
Alignm length: 701
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 480, 161

Conread position: 100-731
Cow position:
Alignm length: 642
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 79

Conread position: 100-796
Cow position:
Alignm length: 701
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 47

Conread position: 105-797
Cow position:
Alignm length: 711
Alignm identity: 450
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 23, 34

Conread position: 108-526
Cow position:
Alignm length: 421
Alignm identity: 261
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 138, 110

Conread position: 108-604
Cow position:
Alignm length: 505
Alignm identity: 319
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 106, 194

Conread position: 108-659
Cow position:
Alignm length: 562
Alignm identity: 341
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 112

Conread position: 110-390
Cow position:
Alignm length: 282
Alignm identity: 184
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 40

Conread position: 110-777
Cow position:
Alignm length: 669
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 467, 207

Conread position: 113-801
Cow position:
Alignm length: 693
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 19

Conread position: 118-798
Cow position:
Alignm length: 682
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 461, 157

Conread position: 118-798
Cow position:
Alignm length: 682
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 461, 190

Conread position: 121-800
Cow position:
Alignm length: 692
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 52

Conread position: 125-798
Cow position:
Alignm length: 683
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 296

Conread position: 131-790
Cow position:
Alignm length: 661
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 446, 336

Conread position: 133-780
Cow position:
Alignm length: 651
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 444, 339

Conread position: 138-801
Cow position:
Alignm length: 669
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 441, 73

Conread position: 170-776
Cow position:
Alignm length: 614
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 127

Conread position: 221-798
Cow position:
Alignm length: 580
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 207

Conread position: 225-796
Cow position:
Alignm length: 581
Alignm identity: 366
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 93, 133

Conread position: 233-801
Cow position:
Alignm length: 573
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 112

Conread position: 235-665
Cow position:
Alignm length: 435
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 195

Conread position: 262-798
Cow position:
Alignm length: 538
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 211

Conread position: 264-797
Cow position:
Alignm length: 536
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 17

Conread position: 266-798
Cow position:
Alignm length: 537
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 70

Conread position: 275-794
Cow position:
Alignm length: 521
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 161

Conread position: 281-462
Cow position:
Alignm length: 183
Alignm identity: 135
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 79, 74

Conread position: 281-739
Cow position:
Alignm length: 461
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 163

Conread position: 281-801
Cow position:
Alignm length: 522
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 55

Conread position: 292-430
Cow position:
Alignm length: 141
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 294-801
Cow position:
Alignm length: 528
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 40

Conread position: 296-727
Cow position:
Alignm length: 434
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 42

Conread position: 298-598
Cow position:
Alignm length: 304
Alignm identity: 194
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 232, 160

Conread position: 305-773
Cow position:
Alignm length: 489
Alignm identity: 323
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 85, 75

Conread position: 318-798
Cow position:
Alignm length: 482
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 155

Conread position: 324-699
Cow position:
Alignm length: 377
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 45

Conread position: 325-797
Cow position:
Alignm length: 476
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 24

Conread position: 325-804
Cow position:
Alignm length: 482
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 332, 18

Conread position: 332-648
Cow position:
Alignm length: 320
Alignm identity: 218
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 245, 140

Conread position: 335-801
Cow position:
Alignm length: 470
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 11

Conread position: 346-506
Cow position:
Alignm length: 162
Alignm identity: 117
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 103, 128

Conread position: 347-797
Cow position:
Alignm length: 453
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 126

Conread position: 360-801
Cow position:
Alignm length: 453
Alignm identity: 286
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 92, 78

Conread position: 409-798
Cow position:
Alignm length: 391
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 69

Conread position: 414-610
Cow position:
Alignm length: 198
Alignm identity: 155
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 163, 59

Conread position: 429-669
Cow position:
Alignm length: 243
Alignm identity: 169
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 148, 25

Conread position: 438-801
Cow position:
Alignm length: 365
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 17

Conread position: 449-718
Cow position:
Alignm length: 275
Alignm identity: 181
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 24, 84

Conread position: 464-801
Cow position:
Alignm length: 341
Alignm identity: 237
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 67, 9

Conread position: 465-799
Cow position:
Alignm length: 340
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 8

Conread position: 470-798
Cow position:
Alignm length: 331
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 0

Conread position: 471-801
Cow position:
Alignm length: 336
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 115

Conread position: 478-798
Cow position:
Alignm length: 322
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 121

Conread position: 482-800
Cow position:
Alignm length: 322
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 130

Conread position: 496-771
Cow position:
Alignm length: 278
Alignm identity: 188
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 82, 236

Conread position: 497-801
Cow position:
Alignm length: 308
Alignm identity: 214
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 38, 30

Conread position: 513-704
Cow position:
Alignm length: 193
Alignm identity: 133
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 72, 24

Conread position: 531-801
Cow position:
Alignm length: 274
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 34

Conread position: 566-798
Cow position:
Alignm length: 234
Alignm identity: 153
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 0

Conread position: 566-801
Cow position:
Alignm length: 237
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 32

Conread position: 589-801
Cow position:
Alignm length: 219
Alignm identity: 166
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 152, 43

Conread position: 595-801
Cow position:
Alignm length: 207
Alignm identity: 160
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 101, 0

Conread position: 609-801
Cow position:
Alignm length: 194
Alignm identity: 155
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 125, 40

Conread position: 625-799
Cow position:
Alignm length: 175
Alignm identity: 130
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 629-801
Cow position:
Alignm length: 174
Alignm identity: 128
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 139, 86

Conread position: 663-804
Cow position:
Alignm length: 142
Alignm identity: 114
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 76, 0

Conread position: 670-780
Cow position:
Alignm length: 111
Alignm identity: 91
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 671-801
Cow position:
Alignm length: 131
Alignm identity: 106
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 9, 0

Conread position: 683-801
Cow position:
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.