Cow genome map

Conread name: Ss1.1-Pig4-TMW8026N13.3

Conread position: 2-797
Cow position:
Alignm length: 798
Alignm identity: 586
Alignm E-value: 0
Alignm gaps (pig, cow): 577, 34

Conread position: 5-797
Cow position:
Alignm length: 797
Alignm identity: 579
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 11

Conread position: 12-797
Cow position:
Alignm length: 795
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 29

Conread position: 22-505
Cow position:
Alignm length: 484
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 22-538
Cow position:
Alignm length: 518
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 512, 19

Conread position: 22-679
Cow position:
Alignm length: 660
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 198

Conread position: 22-714
Cow position:
Alignm length: 694
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 555, 80

Conread position: 22-762
Cow position:
Alignm length: 768
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 450, 220

Conread position: 22-794
Cow position:
Alignm length: 775
Alignm identity: 576
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 205

Conread position: 22-797
Cow position:
Alignm length: 778
Alignm identity: 576
Alignm E-value: 0
Alignm gaps (pig, cow): 557, 308

Conread position: 22-797
Cow position:
Alignm length: 781
Alignm identity: 564
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 61

Conread position: 22-798
Cow position:
Alignm length: 780
Alignm identity: 575
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 69

Conread position: 22-798
Cow position:
Alignm length: 780
Alignm identity: 579
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 205

Conread position: 22-798
Cow position:
Alignm length: 780
Alignm identity: 562
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 451

Conread position: 22-798
Cow position:
Alignm length: 778
Alignm identity: 569
Alignm E-value: 0
Alignm gaps (pig, cow): 555, 69

Conread position: 22-798
Cow position:
Alignm length: 799
Alignm identity: 571
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 247

Conread position: 22-801
Cow position:
Alignm length: 790
Alignm identity: 565
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 145

Conread position: 22-801
Cow position:
Alignm length: 782
Alignm identity: 568
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 61

Conread position: 23-308
Cow position:
Alignm length: 288
Alignm identity: 192
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 102, 115

Conread position: 23-774
Cow position:
Alignm length: 766
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 34

Conread position: 24-798
Cow position:
Alignm length: 779
Alignm identity: 566
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 312

Conread position: 24-798
Cow position:
Alignm length: 775
Alignm identity: 148
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 29-798
Cow position:
Alignm length: 772
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 510, 182

Conread position: 30-508
Cow position:
Alignm length: 493
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 11

Conread position: 30-797
Cow position:
Alignm length: 771
Alignm identity: 562
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 11

Conread position: 30-798
Cow position:
Alignm length: 772
Alignm identity: 574
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 206

Conread position: 41-315
Cow position:
Alignm length: 280
Alignm identity: 185
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 11

Conread position: 41-334
Cow position:
Alignm length: 296
Alignm identity: 200
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 51, 42

Conread position: 45-801
Cow position:
Alignm length: 765
Alignm identity: 569
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 278

Conread position: 53-633
Cow position:
Alignm length: 582
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 517, 270

Conread position: 57-649
Cow position:
Alignm length: 601
Alignm identity: 363
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 30, 93

Conread position: 64-697
Cow position:
Alignm length: 642
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 19

Conread position: 67-801
Cow position:
Alignm length: 747
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 41

Conread position: 68-797
Cow position:
Alignm length: 734
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 6

Conread position: 68-799
Cow position:
Alignm length: 747
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 38

Conread position: 69-332
Cow position:
Alignm length: 265
Alignm identity: 171
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 173, 0

Conread position: 69-702
Cow position:
Alignm length: 639
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 23

Conread position: 69-797
Cow position:
Alignm length: 735
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 508, 23

Conread position: 69-801
Cow position:
Alignm length: 733
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 70-787
Cow position:
Alignm length: 737
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 284

Conread position: 70-801
Cow position:
Alignm length: 735
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 291

Conread position: 70-801
Cow position:
Alignm length: 745
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 33

Conread position: 72-334
Cow position:
Alignm length: 267
Alignm identity: 186
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 17, 0

Conread position: 72-533
Cow position:
Alignm length: 465
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 36

Conread position: 75-798
Cow position:
Alignm length: 725
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 504, 114

Conread position: 78-797
Cow position:
Alignm length: 722
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 501, 239

Conread position: 85-798
Cow position:
Alignm length: 735
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 23

Conread position: 97-327
Cow position:
Alignm length: 232
Alignm identity: 158
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 100

Conread position: 97-595
Cow position:
Alignm length: 500
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 481, 98

Conread position: 97-802
Cow position:
Alignm length: 710
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 10

Conread position: 100-794
Cow position:
Alignm length: 696
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 483, 134

Conread position: 102-378
Cow position:
Alignm length: 277
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 0

Conread position: 104-471
Cow position:
Alignm length: 368
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 0

Conread position: 107-571
Cow position:
Alignm length: 470
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 100

Conread position: 108-557
Cow position:
Alignm length: 450
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 108-730
Cow position:
Alignm length: 627
Alignm identity: 384
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 66, 44

Conread position: 108-740
Cow position:
Alignm length: 640
Alignm identity: 403
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 42, 37

Conread position: 108-798
Cow position:
Alignm length: 699
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 71

Conread position: 118-797
Cow position:
Alignm length: 683
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 384, 165

Conread position: 118-801
Cow position:
Alignm length: 697
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 338

Conread position: 123-803
Cow position:
Alignm length: 687
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 356

Conread position: 132-801
Cow position:
Alignm length: 672
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 445, 33

Conread position: 143-657
Cow position:
Alignm length: 523
Alignm identity: 337
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 79, 61

Conread position: 152-798
Cow position:
Alignm length: 651
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 10

Conread position: 156-798
Cow position:
Alignm length: 669
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 315

Conread position: 171-798
Cow position:
Alignm length: 631
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 65

Conread position: 177-797
Cow position:
Alignm length: 629
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 27

Conread position: 180-485
Cow position:
Alignm length: 306
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 185-798
Cow position:
Alignm length: 621
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 72

Conread position: 218-802
Cow position:
Alignm length: 599
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 39

Conread position: 219-801
Cow position:
Alignm length: 585
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 25

Conread position: 224-797
Cow position:
Alignm length: 602
Alignm identity: 382
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 25, 106

Conread position: 232-763
Cow position:
Alignm length: 535
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 12

Conread position: 237-790
Cow position:
Alignm length: 563
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 20

Conread position: 241-798
Cow position:
Alignm length: 562
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 155

Conread position: 243-793
Cow position:
Alignm length: 554
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 111

Conread position: 266-798
Cow position:
Alignm length: 536
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 208

Conread position: 266-798
Cow position:
Alignm length: 535
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 193

Conread position: 318-798
Cow position:
Alignm length: 482
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 107

Conread position: 319-797
Cow position:
Alignm length: 481
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 154

Conread position: 322-801
Cow position:
Alignm length: 504
Alignm identity: 314
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 79, 10

Conread position: 384-801
Cow position:
Alignm length: 419
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 89

Conread position: 392-772
Cow position:
Alignm length: 382
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 81

Conread position: 429-685
Cow position:
Alignm length: 258
Alignm identity: 178
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 141, 54

Conread position: 445-774
Cow position:
Alignm length: 331
Alignm identity: 225
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 226, 28

Conread position: 478-801
Cow position:
Alignm length: 328
Alignm identity: 213
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 79, 19

Conread position: 480-803
Cow position:
Alignm length: 327
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 42

Conread position: 482-801
Cow position:
Alignm length: 326
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 167

Conread position: 483-798
Cow position:
Alignm length: 317
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 501-739
Cow position:
Alignm length: 244
Alignm identity: 180
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 78, 169

Conread position: 506-801
Cow position:
Alignm length: 298
Alignm identity: 223
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 17, 106

Conread position: 511-801
Cow position:
Alignm length: 294
Alignm identity: 210
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 67, 37

Conread position: 512-803
Cow position:
Alignm length: 296
Alignm identity: 190
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 57, 128

Conread position: 524-800
Cow position:
Alignm length: 283
Alignm identity: 207
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 16, 28

Conread position: 530-803
Cow position:
Alignm length: 278
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 556-804
Cow position:
Alignm length: 250
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 88

Conread position: 578-750
Cow position:
Alignm length: 173
Alignm identity: 142
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 578-804
Cow position:
Alignm length: 227
Alignm identity: 162
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 31, 0

Conread position: 588-739
Cow position:
Alignm length: 152
Alignm identity: 116
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 596-798
Cow position:
Alignm length: 203
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 620-798
Cow position:
Alignm length: 179
Alignm identity: 147
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 23, 0

Conread position: 623-797
Cow position:
Alignm length: 176
Alignm identity: 136
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 171, 84

Conread position: 628-798
Cow position:
Alignm length: 171
Alignm identity: 143
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 632-801
Cow position:
Alignm length: 172
Alignm identity: 136
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 50, 68

Conread position: 638-768
Cow position:
Alignm length: 131
Alignm identity: 112
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 655-798
Cow position:
Alignm length: 144
Alignm identity: 106
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 665-771
Cow position:
Alignm length: 107
Alignm identity: 89
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 675-798
Cow position:
Alignm length: 124
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 0

Show alignments to all cow chromosomes.