Cow genome map

Conread name: Ss1.1-Pig4-TMW8026N13.3

Conread position: 2-270
Cow position:
Alignm length: 269
Alignm identity: 187
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 2-728
Cow position:
Alignm length: 737
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 378, 262

Conread position: 2-798
Cow position:
Alignm length: 799
Alignm identity: 580
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 88

Conread position: 4-671
Cow position:
Alignm length: 670
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 395, 131

Conread position: 4-797
Cow position:
Alignm length: 798
Alignm identity: 578
Alignm E-value: 0
Alignm gaps (pig, cow): 442, 330

Conread position: 19-793
Cow position:
Alignm length: 778
Alignm identity: 579
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 24

Conread position: 22-330
Cow position:
Alignm length: 311
Alignm identity: 171
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 189, 214

Conread position: 22-511
Cow position:
Alignm length: 491
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 81

Conread position: 22-604
Cow position:
Alignm length: 587
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 61

Conread position: 22-798
Cow position:
Alignm length: 796
Alignm identity: 573
Alignm E-value: 0
Alignm gaps (pig, cow): 465, 115

Conread position: 22-798
Cow position:
Alignm length: 788
Alignm identity: 585
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 233

Conread position: 22-798
Cow position:
Alignm length: 783
Alignm identity: 570
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 199

Conread position: 22-798
Cow position:
Alignm length: 778
Alignm identity: 569
Alignm E-value: 0
Alignm gaps (pig, cow): 551, 450

Conread position: 22-803
Cow position:
Alignm length: 783
Alignm identity: 571
Alignm E-value: 0
Alignm gaps (pig, cow): 555, 46

Conread position: 23-339
Cow position:
Alignm length: 317
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 23-797
Cow position:
Alignm length: 782
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 181

Conread position: 23-797
Cow position:
Alignm length: 777
Alignm identity: 573
Alignm E-value: 0
Alignm gaps (pig, cow): 554, 449

Conread position: 23-797
Cow position:
Alignm length: 777
Alignm identity: 579
Alignm E-value: 0
Alignm gaps (pig, cow): 554, 449

Conread position: 23-798
Cow position:
Alignm length: 777
Alignm identity: 569
Alignm E-value: 0
Alignm gaps (pig, cow): 556, 338

Conread position: 23-803
Cow position:
Alignm length: 785
Alignm identity: 561
Alignm E-value: 0
Alignm gaps (pig, cow): 328, 83

Conread position: 28-798
Cow position:
Alignm length: 773
Alignm identity: 568
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 184

Conread position: 30-462
Cow position:
Alignm length: 435
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 206

Conread position: 38-466
Cow position:
Alignm length: 429
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 38-797
Cow position:
Alignm length: 763
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 539, 188

Conread position: 53-357
Cow position:
Alignm length: 305
Alignm identity: 203
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 136, 0

Conread position: 58-774
Cow position:
Alignm length: 733
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 10

Conread position: 67-798
Cow position:
Alignm length: 739
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 34

Conread position: 67-801
Cow position:
Alignm length: 742
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 14

Conread position: 67-801
Cow position:
Alignm length: 740
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 65

Conread position: 70-727
Cow position:
Alignm length: 674
Alignm identity: 407
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 80, 51

Conread position: 72-798
Cow position:
Alignm length: 732
Alignm identity: 565
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 360

Conread position: 78-520
Cow position:
Alignm length: 447
Alignm identity: 282
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 171, 5

Conread position: 78-794
Cow position:
Alignm length: 720
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 87

Conread position: 82-797
Cow position:
Alignm length: 718
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 497, 247

Conread position: 95-634
Cow position:
Alignm length: 540
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 97-797
Cow position:
Alignm length: 703
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 480, 330

Conread position: 97-798
Cow position:
Alignm length: 706
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 229

Conread position: 97-798
Cow position:
Alignm length: 707
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 34

Conread position: 97-801
Cow position:
Alignm length: 708
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 396, 18

Conread position: 99-798
Cow position:
Alignm length: 703
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 442, 63

Conread position: 101-513
Cow position:
Alignm length: 416
Alignm identity: 270
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 49, 45

Conread position: 101-575
Cow position:
Alignm length: 478
Alignm identity: 302
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 49, 41

Conread position: 101-642
Cow position:
Alignm length: 546
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 109

Conread position: 101-801
Cow position:
Alignm length: 710
Alignm identity: 445
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 42, 31

Conread position: 108-536
Cow position:
Alignm length: 436
Alignm identity: 273
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 44, 37

Conread position: 108-572
Cow position:
Alignm length: 480
Alignm identity: 300
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 108, 35

Conread position: 108-665
Cow position:
Alignm length: 561
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 110

Conread position: 108-794
Cow position:
Alignm length: 695
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 26

Conread position: 109-729
Cow position:
Alignm length: 627
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 39

Conread position: 110-798
Cow position:
Alignm length: 695
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 230

Conread position: 115-794
Cow position:
Alignm length: 691
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 100

Conread position: 115-803
Cow position:
Alignm length: 692
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 61

Conread position: 116-798
Cow position:
Alignm length: 686
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 120

Conread position: 118-798
Cow position:
Alignm length: 685
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 126

Conread position: 122-798
Cow position:
Alignm length: 699
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 124

Conread position: 123-800
Cow position:
Alignm length: 688
Alignm identity: 422
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 11, 72

Conread position: 127-797
Cow position:
Alignm length: 677
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 74

Conread position: 131-488
Cow position:
Alignm length: 359
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 211

Conread position: 136-610
Cow position:
Alignm length: 476
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 442, 175

Conread position: 139-566
Cow position:
Alignm length: 428
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 149-801
Cow position:
Alignm length: 657
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 76

Conread position: 152-466
Cow position:
Alignm length: 317
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 61

Conread position: 170-779
Cow position:
Alignm length: 614
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 55

Conread position: 170-801
Cow position:
Alignm length: 643
Alignm identity: 391
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 133, 90

Conread position: 188-780
Cow position:
Alignm length: 598
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 342, 62

Conread position: 204-797
Cow position:
Alignm length: 597
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 14

Conread position: 220-751
Cow position:
Alignm length: 549
Alignm identity: 337
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 38, 85

Conread position: 221-797
Cow position:
Alignm length: 591
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 127

Conread position: 222-804
Cow position:
Alignm length: 585
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 32

Conread position: 226-466
Cow position:
Alignm length: 241
Alignm identity: 171
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 99, 0

Conread position: 228-798
Cow position:
Alignm length: 573
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 87

Conread position: 234-798
Cow position:
Alignm length: 567
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 87

Conread position: 235-697
Cow position:
Alignm length: 466
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 95

Conread position: 249-457
Cow position:
Alignm length: 209
Alignm identity: 140
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 255-798
Cow position:
Alignm length: 549
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 74

Conread position: 268-514
Cow position:
Alignm length: 247
Alignm identity: 135
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 159, 0

Conread position: 274-786
Cow position:
Alignm length: 527
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 74

Conread position: 275-798
Cow position:
Alignm length: 525
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 106

Conread position: 277-798
Cow position:
Alignm length: 523
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 59

Conread position: 288-801
Cow position:
Alignm length: 518
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 187

Conread position: 297-455
Cow position:
Alignm length: 159
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 137, 0

Conread position: 307-636
Cow position:
Alignm length: 330
Alignm identity: 146
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 165, 0

Conread position: 311-798
Cow position:
Alignm length: 489
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 116

Conread position: 318-622
Cow position:
Alignm length: 315
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 70

Conread position: 319-741
Cow position:
Alignm length: 427
Alignm identity: 281
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 41, 22

Conread position: 321-798
Cow position:
Alignm length: 479
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 153

Conread position: 324-624
Cow position:
Alignm length: 304
Alignm identity: 207
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 30, 97

Conread position: 328-801
Cow position:
Alignm length: 494
Alignm identity: 319
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 43, 18

Conread position: 348-801
Cow position:
Alignm length: 468
Alignm identity: 310
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 133, 19

Conread position: 349-741
Cow position:
Alignm length: 402
Alignm identity: 261
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 18, 32

Conread position: 375-801
Cow position:
Alignm length: 429
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 85

Conread position: 384-783
Cow position:
Alignm length: 403
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 90

Conread position: 405-797
Cow position:
Alignm length: 394
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 389, 68

Conread position: 443-777
Cow position:
Alignm length: 338
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 31

Conread position: 455-714
Cow position:
Alignm length: 262
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 18

Conread position: 458-798
Cow position:
Alignm length: 343
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 15

Conread position: 460-642
Cow position:
Alignm length: 184
Alignm identity: 134
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 117, 18

Conread position: 462-798
Cow position:
Alignm length: 337
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 472-798
Cow position:
Alignm length: 329
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 56

Conread position: 473-801
Cow position:
Alignm length: 339
Alignm identity: 239
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 60, 30

Conread position: 477-726
Cow position:
Alignm length: 251
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 51

Conread position: 490-801
Cow position:
Alignm length: 313
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 20

Conread position: 516-801
Cow position:
Alignm length: 286
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 530-751
Cow position:
Alignm length: 223
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 205

Conread position: 545-801
Cow position:
Alignm length: 262
Alignm identity: 174
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 33, 57

Conread position: 546-797
Cow position:
Alignm length: 263
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 25

Conread position: 549-797
Cow position:
Alignm length: 251
Alignm identity: 170
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 30, 144

Conread position: 579-798
Cow position:
Alignm length: 224
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 199

Conread position: 594-798
Cow position:
Alignm length: 205
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 598-774
Cow position:
Alignm length: 177
Alignm identity: 140
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 615-786
Cow position:
Alignm length: 172
Alignm identity: 131
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 92, 0

Conread position: 638-804
Cow position:
Alignm length: 167
Alignm identity: 137
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 656-798
Cow position:
Alignm length: 145
Alignm identity: 115
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 668-798
Cow position:
Alignm length: 131
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 0

Show alignments to all cow chromosomes.