Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8026N13.3
        

               Conread position:
               1-425
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               2-423
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               285
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               214, 34
               

               Conread position:
               2-455
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 401
               

               Conread position:
               2-740
               

               Cow position:
               
               

               Alignm length:
               744
               

               Alignm identity:
               543
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 22
               

               Conread position:
               2-797
               

               Cow position:
               
               

               Alignm length:
               803
               

               Alignm identity:
               551
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 53
               

               Conread position:
               2-797
               

               Cow position:
               
               

               Alignm length:
               803
               

               Alignm identity:
               587
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 18
               

               Conread position:
               2-798
               

               Cow position:
               
               

               Alignm length:
               811
               

               Alignm identity:
               575
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 34
               

               Conread position:
               2-798
               

               Cow position:
               
               

               Alignm length:
               813
               

               Alignm identity:
               586
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 17
               

               Conread position:
               5-798
               

               Cow position:
               
               

               Alignm length:
               806
               

               Alignm identity:
               570
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 199
               

               Conread position:
               12-798
               

               Cow position:
               
               

               Alignm length:
               800
               

               Alignm identity:
               582
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               13-797
               

               Cow position:
               
               

               Alignm length:
               789
               

               Alignm identity:
               559
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 30
               

               Conread position:
               17-276
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               46, 9
               

               Conread position:
               22-329
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               189, 0
               

               Conread position:
               22-714
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               507
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               536, 19
               

               Conread position:
               22-798
               

               Cow position:
               
               

               Alignm length:
               779
               

               Alignm identity:
               583
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 110
               

               Conread position:
               22-798
               

               Cow position:
               
               

               Alignm length:
               782
               

               Alignm identity:
               564
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 79
               

               Conread position:
               22-798
               

               Cow position:
               
               

               Alignm length:
               784
               

               Alignm identity:
               571
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 84
               

               Conread position:
               23-793
               

               Cow position:
               
               

               Alignm length:
               774
               

               Alignm identity:
               567
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 83
               

               Conread position:
               23-797
               

               Cow position:
               
               

               Alignm length:
               797
               

               Alignm identity:
               529
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 220
               

               Conread position:
               23-797
               

               Cow position:
               
               

               Alignm length:
               777
               

               Alignm identity:
               557
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 90
               

               Conread position:
               23-798
               

               Cow position:
               
               

               Alignm length:
               779
               

               Alignm identity:
               570
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 210
               

               Conread position:
               23-800
               

               Cow position:
               
               

               Alignm length:
               782
               

               Alignm identity:
               577
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 183
               

               Conread position:
               26-764
               

               Cow position:
               
               

               Alignm length:
               744
               

               Alignm identity:
               484
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 26
               

               Conread position:
               27-676
               

               Cow position:
               
               

               Alignm length:
               657
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 25
               

               Conread position:
               38-797
               

               Cow position:
               
               

               Alignm length:
               763
               

               Alignm identity:
               562
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 45
               

               Conread position:
               41-797
               

               Cow position:
               
               

               Alignm length:
               769
               

               Alignm identity:
               563
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 65
               

               Conread position:
               41-797
               

               Cow position:
               
               

               Alignm length:
               759
               

               Alignm identity:
               554
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 12
               

               Conread position:
               56-471
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               262
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               46, 35
               

               Conread position:
               67-542
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 90
               

               Conread position:
               68-797
               

               Cow position:
               
               

               Alignm length:
               733
               

               Alignm identity:
               535
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               509, 334
               

               Conread position:
               68-801
               

               Cow position:
               
               

               Alignm length:
               740
               

               Alignm identity:
               505
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 14
               

               Conread position:
               72-797
               

               Cow position:
               
               

               Alignm length:
               731
               

               Alignm identity:
               541
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 47
               

               Conread position:
               82-784
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               524
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 20
               

               Conread position:
               87-797
               

               Cow position:
               
               

               Alignm length:
               715
               

               Alignm identity:
               511
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               274, 12
               

               Conread position:
               92-801
               

               Cow position:
               
               

               Alignm length:
               712
               

               Alignm identity:
               529
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               487, 223
               

               Conread position:
               93-798
               

               Cow position:
               
               

               Alignm length:
               709
               

               Alignm identity:
               504
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 143
               

               Conread position:
               97-327
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               23, 17
               

               Conread position:
               97-747
               

               Cow position:
               
               

               Alignm length:
               669
               

               Alignm identity:
               482
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 198
               

               Conread position:
               97-758
               

               Cow position:
               
               

               Alignm length:
               664
               

               Alignm identity:
               494
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               273, 231
               

               Conread position:
               97-797
               

               Cow position:
               
               

               Alignm length:
               703
               

               Alignm identity:
               529
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 332
               

               Conread position:
               100-508
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 115
               

               Conread position:
               102-756
               

               Cow position:
               
               

               Alignm length:
               663
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 53
               

               Conread position:
               105-756
               

               Cow position:
               
               

               Alignm length:
               652
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               113-462
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 0
               

               Conread position:
               118-472
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               123-798
               

               Cow position:
               
               

               Alignm length:
               680
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               315, 89
               

               Conread position:
               128-460
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               244, 0
               

               Conread position:
               128-616
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 95
               

               Conread position:
               133-655
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               339
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               264, 52
               

               Conread position:
               134-797
               

               Cow position:
               
               

               Alignm length:
               667
               

               Alignm identity:
               498
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               445, 339
               

               Conread position:
               161-318
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               171-507
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 0
               

               Conread position:
               181-426
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               221-798
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               356, 251
               

               Conread position:
               227-801
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               235-432
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               251-797
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               326, 221
               

               Conread position:
               258-797
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               366
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               15, 10
               

               Conread position:
               266-592
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               267-534
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               235, 161
               

               Conread position:
               268-797
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 35
               

               Conread position:
               292-762
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 48
               

               Conread position:
               310-782
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 14
               

               Conread position:
               315-801
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 12
               

               Conread position:
               318-797
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               261, 155
               

               Conread position:
               318-798
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 29
               

               Conread position:
               360-801
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 111
               

               Conread position:
               363-798
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 17
               

               Conread position:
               366-798
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 29
               

               Conread position:
               408-732
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               60, 18
               

               Conread position:
               416-791
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 57
               

               Conread position:
               429-801
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 44
               

               Conread position:
               432-801
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 12
               

               Conread position:
               458-797
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 15
               

               Conread position:
               460-797
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               239
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               87, 18
               

               Conread position:
               472-801
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               64, 78
               

               Conread position:
               487-779
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               489-798
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 39
               

               Conread position:
               492-666
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               31, 77
               

               Conread position:
               496-763
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               22, 33
               

               Conread position:
               506-801
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               73, 22
               

               Conread position:
               532-801
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 43
               

               Conread position:
               546-771
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               34, 55
               

               Conread position:
               551-705
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               31, 94
               

               Conread position:
               566-799
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               181
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               13, 115
               

               Conread position:
               588-762
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               588-798
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 9
               

               Conread position:
               589-797
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               589-799
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               589-801
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               169
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               605-801
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               659-801
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               52, 0
               
Show alignments to all cow chromosomes.