Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8026N13.3
        

               Conread position:
               1-490
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 40
               

               Conread position:
               1-800
               

               Cow position:
               
               

               Alignm length:
               806
               

               Alignm identity:
               579
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               317, 13
               

               Conread position:
               2-287
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               129, 106
               

               Conread position:
               2-371
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               326, 88
               

               Conread position:
               2-553
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               2-671
               

               Cow position:
               
               

               Alignm length:
               672
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               381, 9
               

               Conread position:
               2-700
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 16
               

               Conread position:
               2-771
               

               Cow position:
               
               

               Alignm length:
               773
               

               Alignm identity:
               552
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 29
               

               Conread position:
               2-798
               

               Cow position:
               
               

               Alignm length:
               810
               

               Alignm identity:
               580
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 19
               

               Conread position:
               2-798
               

               Cow position:
               
               

               Alignm length:
               805
               

               Alignm identity:
               578
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 17
               

               Conread position:
               2-800
               

               Cow position:
               
               

               Alignm length:
               800
               

               Alignm identity:
               559
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               577, 102
               

               Conread position:
               2-801
               

               Cow position:
               
               

               Alignm length:
               802
               

               Alignm identity:
               577
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 67
               

               Conread position:
               12-673
               

               Cow position:
               
               

               Alignm length:
               670
               

               Alignm identity:
               478
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 27
               

               Conread position:
               12-798
               

               Cow position:
               
               

               Alignm length:
               793
               

               Alignm identity:
               552
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 41
               

               Conread position:
               15-670
               

               Cow position:
               
               

               Alignm length:
               676
               

               Alignm identity:
               463
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 94
               

               Conread position:
               20-798
               

               Cow position:
               
               

               Alignm length:
               789
               

               Alignm identity:
               556
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 262
               

               Conread position:
               22-306
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               172, 0
               

               Conread position:
               22-371
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 214
               

               Conread position:
               22-610
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               555, 301
               

               Conread position:
               22-617
               

               Cow position:
               
               

               Alignm length:
               597
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               555, 106
               

               Conread position:
               22-798
               

               Cow position:
               
               

               Alignm length:
               780
               

               Alignm identity:
               561
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 197
               

               Conread position:
               22-798
               

               Cow position:
               
               

               Alignm length:
               782
               

               Alignm identity:
               581
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 175
               

               Conread position:
               22-798
               

               Cow position:
               
               

               Alignm length:
               779
               

               Alignm identity:
               565
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 213
               

               Conread position:
               22-798
               

               Cow position:
               
               

               Alignm length:
               798
               

               Alignm identity:
               576
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 19
               

               Conread position:
               22-798
               

               Cow position:
               
               

               Alignm length:
               781
               

               Alignm identity:
               574
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 84
               

               Conread position:
               23-313
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               203
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               26-404
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               251
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               40, 87
               

               Conread position:
               27-777
               

               Cow position:
               
               

               Alignm length:
               755
               

               Alignm identity:
               502
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 42
               

               Conread position:
               30-765
               

               Cow position:
               
               

               Alignm length:
               740
               

               Alignm identity:
               553
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 76
               

               Conread position:
               30-797
               

               Cow position:
               
               

               Alignm length:
               774
               

               Alignm identity:
               571
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               549, 20
               

               Conread position:
               32-798
               

               Cow position:
               
               

               Alignm length:
               769
               

               Alignm identity:
               572
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 187
               

               Conread position:
               36-355
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               226
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               144, 178
               

               Conread position:
               38-282
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               165, 0
               

               Conread position:
               38-797
               

               Cow position:
               
               

               Alignm length:
               771
               

               Alignm identity:
               566
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               215, 68
               

               Conread position:
               38-798
               

               Cow position:
               
               

               Alignm length:
               763
               

               Alignm identity:
               548
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               542, 37
               

               Conread position:
               41-798
               

               Cow position:
               
               

               Alignm length:
               770
               

               Alignm identity:
               555
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 98
               

               Conread position:
               56-797
               

               Cow position:
               
               

               Alignm length:
               745
               

               Alignm identity:
               530
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 42
               

               Conread position:
               61-789
               

               Cow position:
               
               

               Alignm length:
               736
               

               Alignm identity:
               492
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 67
               

               Conread position:
               61-801
               

               Cow position:
               
               

               Alignm length:
               748
               

               Alignm identity:
               506
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 132
               

               Conread position:
               67-449
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               249
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               62, 17
               

               Conread position:
               67-784
               

               Cow position:
               
               

               Alignm length:
               731
               

               Alignm identity:
               485
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 374
               

               Conread position:
               68-506
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               281
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               46, 82
               

               Conread position:
               68-514
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               277
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               12, 184
               

               Conread position:
               68-668
               

               Cow position:
               
               

               Alignm length:
               617
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 236
               

               Conread position:
               74-623
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 342
               

               Conread position:
               74-798
               

               Cow position:
               
               

               Alignm length:
               728
               

               Alignm identity:
               539
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 32
               

               Conread position:
               76-801
               

               Cow position:
               
               

               Alignm length:
               731
               

               Alignm identity:
               506
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 21
               

               Conread position:
               78-625
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               372
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               54, 147
               

               Conread position:
               78-801
               

               Cow position:
               
               

               Alignm length:
               742
               

               Alignm identity:
               553
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 25
               

               Conread position:
               81-801
               

               Cow position:
               
               

               Alignm length:
               731
               

               Alignm identity:
               482
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 22
               

               Conread position:
               81-801
               

               Cow position:
               
               

               Alignm length:
               724
               

               Alignm identity:
               501
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               275, 102
               

               Conread position:
               82-407
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               225
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               148, 19
               

               Conread position:
               92-385
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               123, 82
               

               Conread position:
               92-525
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               266
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               192, 16
               

               Conread position:
               93-403
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               209
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               227, 107
               

               Conread position:
               96-513
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               100-567
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               305
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               114, 8
               

               Conread position:
               100-765
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 182
               

               Conread position:
               101-743
               

               Cow position:
               
               

               Alignm length:
               661
               

               Alignm identity:
               404
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               27, 111
               

               Conread position:
               101-789
               

               Cow position:
               
               

               Alignm length:
               704
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               264, 112
               

               Conread position:
               108-800
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 36
               

               Conread position:
               110-798
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               489
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               467, 101
               

               Conread position:
               115-783
               

               Cow position:
               
               

               Alignm length:
               676
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 36
               

               Conread position:
               120-794
               

               Cow position:
               
               

               Alignm length:
               677
               

               Alignm identity:
               508
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 103
               

               Conread position:
               125-801
               

               Cow position:
               
               

               Alignm length:
               678
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               454, 7
               

               Conread position:
               131-612
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 5
               

               Conread position:
               132-380
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               156, 79
               

               Conread position:
               138-559
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 187
               

               Conread position:
               169-573
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               264
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               125, 75
               

               Conread position:
               191-798
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 42
               

               Conread position:
               199-705
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               315
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               214, 51
               

               Conread position:
               225-743
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               329
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               17, 51
               

               Conread position:
               240-777
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               348
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               29, 143
               

               Conread position:
               267-549
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               197, 52
               

               Conread position:
               282-801
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               267, 99
               

               Conread position:
               285-801
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               296-557
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               95, 161
               

               Conread position:
               296-797
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 57
               

               Conread position:
               299-744
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               280, 174
               

               Conread position:
               305-797
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 95
               

               Conread position:
               307-790
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               270, 164
               

               Conread position:
               318-797
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 457
               

               Conread position:
               347-798
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 127
               

               Conread position:
               347-801
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 62
               

               Conread position:
               368-798
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 105
               

               Conread position:
               369-575
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               393-798
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 80
               

               Conread position:
               441-796
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               74, 25
               

               Conread position:
               444-790
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 13
               

               Conread position:
               459-744
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 14
               

               Conread position:
               491-800
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 73
               

               Conread position:
               502-797
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               510-754
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               69, 33
               

               Conread position:
               519-782
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               190
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               59, 28
               

               Conread position:
               519-804
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               60, 26
               

               Conread position:
               578-798
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 205
               

               Conread position:
               590-773
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               52, 119
               

               Conread position:
               603-790
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               159
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               611-798
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               150
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               636-801
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               81, 39
               

               Conread position:
               647-801
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               672-798
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               688-798
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               693-798
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               87
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               95, 0
               
Show alignments to all cow chromosomes.