Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8026N13.3
        

               Conread position:
               1-654
               

               Cow position:
               
               

               Alignm length:
               660
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 49
               

               Conread position:
               2-625
               

               Cow position:
               
               

               Alignm length:
               636
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               557, 94
               

               Conread position:
               2-801
               

               Cow position:
               
               

               Alignm length:
               801
               

               Alignm identity:
               586
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               577, 52
               

               Conread position:
               5-779
               

               Cow position:
               
               

               Alignm length:
               777
               

               Alignm identity:
               568
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               334, 344
               

               Conread position:
               6-798
               

               Cow position:
               
               

               Alignm length:
               810
               

               Alignm identity:
               578
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 144
               

               Conread position:
               12-784
               

               Cow position:
               
               

               Alignm length:
               774
               

               Alignm identity:
               565
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               567, 14
               

               Conread position:
               13-692
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               415
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               139, 28
               

               Conread position:
               15-488
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               306
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               110, 14
               

               Conread position:
               19-803
               

               Cow position:
               
               

               Alignm length:
               788
               

               Alignm identity:
               538
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               560, 49
               

               Conread position:
               20-798
               

               Cow position:
               
               

               Alignm length:
               784
               

               Alignm identity:
               579
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 192
               

               Conread position:
               22-798
               

               Cow position:
               
               

               Alignm length:
               778
               

               Alignm identity:
               550
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               557, 189
               

               Conread position:
               22-798
               

               Cow position:
               
               

               Alignm length:
               783
               

               Alignm identity:
               556
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 183
               

               Conread position:
               22-798
               

               Cow position:
               
               

               Alignm length:
               781
               

               Alignm identity:
               550
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 225
               

               Conread position:
               22-798
               

               Cow position:
               
               

               Alignm length:
               778
               

               Alignm identity:
               569
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               557, 69
               

               Conread position:
               22-798
               

               Cow position:
               
               

               Alignm length:
               779
               

               Alignm identity:
               573
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 214
               

               Conread position:
               30-403
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               30-462
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               30-797
               

               Cow position:
               
               

               Alignm length:
               772
               

               Alignm identity:
               564
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               549, 11
               

               Conread position:
               34-801
               

               Cow position:
               
               

               Alignm length:
               792
               

               Alignm identity:
               527
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 27
               

               Conread position:
               37-520
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 167
               

               Conread position:
               38-797
               

               Cow position:
               
               

               Alignm length:
               762
               

               Alignm identity:
               566
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               674, 145
               

               Conread position:
               41-798
               

               Cow position:
               
               

               Alignm length:
               759
               

               Alignm identity:
               556
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               538, 72
               

               Conread position:
               41-803
               

               Cow position:
               
               

               Alignm length:
               769
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 12
               

               Conread position:
               44-798
               

               Cow position:
               
               

               Alignm length:
               756
               

               Alignm identity:
               550
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               535, 39
               

               Conread position:
               56-617
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 484
               

               Conread position:
               58-617
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 79
               

               Conread position:
               58-798
               

               Cow position:
               
               

               Alignm length:
               744
               

               Alignm identity:
               549
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               479, 60
               

               Conread position:
               67-270
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               29, 161
               

               Conread position:
               67-801
               

               Cow position:
               
               

               Alignm length:
               740
               

               Alignm identity:
               516
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 166
               

               Conread position:
               67-801
               

               Cow position:
               
               

               Alignm length:
               750
               

               Alignm identity:
               502
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 31
               

               Conread position:
               69-397
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               153, 21
               

               Conread position:
               92-461
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               28, 144
               

               Conread position:
               92-503
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               240, 151
               

               Conread position:
               97-798
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               534
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 108
               

               Conread position:
               99-798
               

               Cow position:
               
               

               Alignm length:
               710
               

               Alignm identity:
               511
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 82
               

               Conread position:
               101-610
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               319
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               22, 43
               

               Conread position:
               101-645
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               351
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               319, 43
               

               Conread position:
               108-661
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               360
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               77, 14
               

               Conread position:
               108-796
               

               Cow position:
               
               

               Alignm length:
               710
               

               Alignm identity:
               436
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               45, 28
               

               Conread position:
               114-765
               

               Cow position:
               
               

               Alignm length:
               653
               

               Alignm identity:
               472
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               463, 358
               

               Conread position:
               115-757
               

               Cow position:
               
               

               Alignm length:
               647
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 17
               

               Conread position:
               116-777
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 5
               

               Conread position:
               118-750
               

               Cow position:
               
               

               Alignm length:
               637
               

               Alignm identity:
               472
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 126
               

               Conread position:
               118-797
               

               Cow position:
               
               

               Alignm length:
               683
               

               Alignm identity:
               528
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               417, 222
               

               Conread position:
               123-801
               

               Cow position:
               
               

               Alignm length:
               687
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 12
               

               Conread position:
               137-356
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               209, 191
               

               Conread position:
               140-798
               

               Cow position:
               
               

               Alignm length:
               660
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               437, 332
               

               Conread position:
               221-777
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 29
               

               Conread position:
               221-799
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               322, 29
               

               Conread position:
               235-610
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               240
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               114, 67
               

               Conread position:
               268-801
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               334
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               40, 172
               

               Conread position:
               311-702
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               264
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               267, 16
               

               Conread position:
               349-797
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 11
               

               Conread position:
               390-766
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 22
               

               Conread position:
               391-800
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 86
               

               Conread position:
               413-705
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               199
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               167, 40
               

               Conread position:
               429-798
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 44
               

               Conread position:
               465-798
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 8
               

               Conread position:
               480-796
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               93, 132
               

               Conread position:
               492-656
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               500-744
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               79, 28
               

               Conread position:
               517-798
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 207
               

               Conread position:
               528-793
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 12
               

               Conread position:
               544-797
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               192
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               34, 141
               

               Conread position:
               653-798
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               653-801
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               687-798
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.