Cow genome map

Conread name: Ss1.1-Pig4-TMW8026N13.3

Conread position: 2-289
Cow position: chr26:34012554-34012834 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 195
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 198, 47

Conread position: 2-331
Cow position: chr26:9846601-9846278 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 227
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 240, 78

Conread position: 13-312
Cow position: chr26:8918524-8918817 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 168
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 10, 199

Conread position: 19-801
Cow position: chr26:9563814-9563032 (view UCSC Genome Browser custom track)
Alignm length: 787
Alignm identity: 576
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 185

Conread position: 20-798
Cow position: chr26:3031265-3030507 (view UCSC Genome Browser custom track)
Alignm length: 782
Alignm identity: 559
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 208

Conread position: 22-338
Cow position: chr26:24201169-24201486 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 0

Conread position: 22-339
Cow position: chr26:19998034-19998351 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 214

Conread position: 22-466
Cow position: chr26:9112013-9112457 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 22-781
Cow position: chr26:20262419-20263155 (view UCSC Genome Browser custom track)
Alignm length: 779
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 19

Conread position: 22-798
Cow position: chr26:2198193-2198948 (view UCSC Genome Browser custom track)
Alignm length: 778
Alignm identity: 565
Alignm E-value: 0
Alignm gaps (pig, cow): 555, 143

Conread position: 22-798
Cow position: chr26:2352801-2352038 (view UCSC Genome Browser custom track)
Alignm length: 778
Alignm identity: 568
Alignm E-value: 0
Alignm gaps (pig, cow): 555, 133

Conread position: 22-798
Cow position: chr26:11254514-11253734 (view UCSC Genome Browser custom track)
Alignm length: 785
Alignm identity: 573
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 70

Conread position: 22-798
Cow position: chr26:12589013-12588243 (view UCSC Genome Browser custom track)
Alignm length: 781
Alignm identity: 583
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 70

Conread position: 22-798
Cow position: chr26:30782316-30783065 (view UCSC Genome Browser custom track)
Alignm length: 778
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 551, 223

Conread position: 23-270
Cow position: chr26:30590692-30590445 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 160
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 23-790
Cow position: chr26:17397388-17396617 (view UCSC Genome Browser custom track)
Alignm length: 776
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 187

Conread position: 23-797
Cow position: chr26:19351965-19351192 (view UCSC Genome Browser custom track)
Alignm length: 777
Alignm identity: 577
Alignm E-value: 0
Alignm gaps (pig, cow): 554, 405

Conread position: 26-403
Cow position: chr26:6516416-6516783 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 249
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 22, 37

Conread position: 32-798
Cow position: chr26:8869436-8870204 (view UCSC Genome Browser custom track)
Alignm length: 775
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 67

Conread position: 49-548
Cow position: chr26:3074108-3074594 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 298
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 290, 156

Conread position: 55-499
Cow position: chr26:23605328-23604878 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 17

Conread position: 55-538
Cow position: chr26:19535758-19536246 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 315
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 46, 97

Conread position: 60-471
Cow position: chr26:6489444-6489042 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 263
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 6, 176

Conread position: 68-630
Cow position: chr26:11301386-11301941 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 85

Conread position: 78-803
Cow position: chr26:5674773-5675488 (view UCSC Genome Browser custom track)
Alignm length: 732
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 69

Conread position: 79-327
Cow position: chr26:12655561-12655798 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 178
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 49, 137

Conread position: 81-448
Cow position: chr26:9851038-9850649 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 272
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 31, 23

Conread position: 81-448
Cow position: chr26:9854502-9854115 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 272
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 31, 23

Conread position: 93-669
Cow position: chr26:20254696-20255247 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 484, 14

Conread position: 94-521
Cow position: chr26:12665606-12666015 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 281
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 8, 0

Conread position: 97-797
Cow position: chr26:12574774-12574087 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 108

Conread position: 101-801
Cow position: chr26:8283415-8282738 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 44

Conread position: 105-800
Cow position: chr26:25033597-25034287 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 435
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 45, 19

Conread position: 108-798
Cow position: chr26:3691434-3692113 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 213

Conread position: 109-801
Cow position: chr26:1409894-1410568 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 449
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 27, 104

Conread position: 112-532
Cow position: chr26:6850537-6850119 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 33

Conread position: 114-798
Cow position: chr26:18854734-18855410 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 97

Conread position: 117-798
Cow position: chr26:15145115-15144438 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 49

Conread position: 118-793
Cow position: chr26:4605537-4604871 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 459, 137

Conread position: 121-801
Cow position: chr26:12025907-12025238 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 421
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 17, 49

Conread position: 123-705
Cow position: chr26:16904435-16905001 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 57

Conread position: 185-593
Cow position: chr26:11537122-11536719 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 10

Conread position: 224-641
Cow position: chr26:5551522-5551939 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 284
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 24, 181

Conread position: 251-793
Cow position: chr26:30589592-30589055 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 15

Conread position: 278-456
Cow position: chr26:6602009-6602188 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 163, 0

Conread position: 318-799
Cow position: chr26:12656138-12656595 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 27

Conread position: 328-505
Cow position: chr26:12659837-12659661 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 144, 0

Conread position: 332-543
Cow position: chr26:9845755-9845547 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 104, 0

Conread position: 362-566
Cow position: chr26:21350263-21350465 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 58, 0

Conread position: 443-798
Cow position: chr26:8918818-8919172 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 30

Conread position: 464-751
Cow position: chr26:17997010-17996725 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 203
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 66, 9

Conread position: 464-801
Cow position: chr26:12666095-12666427 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 44

Conread position: 467-798
Cow position: chr26:18852211-18852541 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 6

Conread position: 472-797
Cow position: chr26:11635941-11635624 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 211
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 37, 15

Conread position: 492-762
Cow position: chr26:23603751-23603481 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 492-798
Cow position: chr26:9112753-9113060 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 0

Conread position: 498-779
Cow position: chr26:9845555-9845275 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 30

Conread position: 503-729
Cow position: chr26:4334169-4334398 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 508-799
Cow position: chr26:9849894-9849603 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 169

Conread position: 508-799
Cow position: chr26:9853404-9853114 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 0

Conread position: 511-798
Cow position: chr26:4806507-4806239 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 214
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 68, 129

Conread position: 523-797
Cow position: chr26:6849390-6849115 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 0

Conread position: 553-797
Cow position: chr26:23043214-23043459 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 168
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 32, 191

Conread position: 658-798
Cow position: chr26:20255382-20255516 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 76, 0

Show alignments to all cow chromosomes.