Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8026N13.3
        

               Conread position:
               2-289
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               198, 47
               

               Conread position:
               2-331
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               227
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               240, 78
               

               Conread position:
               13-312
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               10, 199
               

               Conread position:
               19-801
               

               Cow position:
               
               

               Alignm length:
               787
               

               Alignm identity:
               576
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 185
               

               Conread position:
               20-798
               

               Cow position:
               
               

               Alignm length:
               782
               

               Alignm identity:
               559
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 208
               

               Conread position:
               22-338
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 0
               

               Conread position:
               22-339
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 214
               

               Conread position:
               22-466
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               22-781
               

               Cow position:
               
               

               Alignm length:
               779
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               302, 19
               

               Conread position:
               22-798
               

               Cow position:
               
               

               Alignm length:
               778
               

               Alignm identity:
               565
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               555, 143
               

               Conread position:
               22-798
               

               Cow position:
               
               

               Alignm length:
               778
               

               Alignm identity:
               568
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               555, 133
               

               Conread position:
               22-798
               

               Cow position:
               
               

               Alignm length:
               785
               

               Alignm identity:
               573
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 70
               

               Conread position:
               22-798
               

               Cow position:
               
               

               Alignm length:
               781
               

               Alignm identity:
               583
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 70
               

               Conread position:
               22-798
               

               Cow position:
               
               

               Alignm length:
               778
               

               Alignm identity:
               540
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               551, 223
               

               Conread position:
               23-270
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               23-790
               

               Cow position:
               
               

               Alignm length:
               776
               

               Alignm identity:
               557
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 187
               

               Conread position:
               23-797
               

               Cow position:
               
               

               Alignm length:
               777
               

               Alignm identity:
               577
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               554, 405
               

               Conread position:
               26-403
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               249
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               22, 37
               

               Conread position:
               32-798
               

               Cow position:
               
               

               Alignm length:
               775
               

               Alignm identity:
               557
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 67
               

               Conread position:
               49-548
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               298
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               290, 156
               

               Conread position:
               55-499
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 17
               

               Conread position:
               55-538
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               315
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               46, 97
               

               Conread position:
               60-471
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               263
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               6, 176
               

               Conread position:
               68-630
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 85
               

               Conread position:
               78-803
               

               Cow position:
               
               

               Alignm length:
               732
               

               Alignm identity:
               529
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               228, 69
               

               Conread position:
               79-327
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               49, 137
               

               Conread position:
               81-448
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               272
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               31, 23
               

               Conread position:
               81-448
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               272
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               31, 23
               

               Conread position:
               93-669
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               484, 14
               

               Conread position:
               94-521
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               281
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               97-797
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               545
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 108
               

               Conread position:
               101-801
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               472
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 44
               

               Conread position:
               105-800
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               435
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               45, 19
               

               Conread position:
               108-798
               

               Cow position:
               
               

               Alignm length:
               698
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 213
               

               Conread position:
               109-801
               

               Cow position:
               
               

               Alignm length:
               708
               

               Alignm identity:
               449
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               27, 104
               

               Conread position:
               112-532
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 33
               

               Conread position:
               114-798
               

               Cow position:
               
               

               Alignm length:
               687
               

               Alignm identity:
               527
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               237, 97
               

               Conread position:
               117-798
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 49
               

               Conread position:
               118-793
               

               Cow position:
               
               

               Alignm length:
               677
               

               Alignm identity:
               488
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               459, 137
               

               Conread position:
               121-801
               

               Cow position:
               
               

               Alignm length:
               698
               

               Alignm identity:
               421
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               17, 49
               

               Conread position:
               123-705
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 57
               

               Conread position:
               185-593
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 10
               

               Conread position:
               224-641
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               284
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               24, 181
               

               Conread position:
               251-793
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               326, 15
               

               Conread position:
               278-456
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               163, 0
               

               Conread position:
               318-799
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 27
               

               Conread position:
               328-505
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               332-543
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               362-566
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               443-798
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 30
               

               Conread position:
               464-751
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               66, 9
               

               Conread position:
               464-801
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 44
               

               Conread position:
               467-798
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 6
               

               Conread position:
               472-797
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               37, 15
               

               Conread position:
               492-762
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               492-798
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               498-779
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 30
               

               Conread position:
               503-729
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               508-799
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 169
               

               Conread position:
               508-799
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               167, 0
               

               Conread position:
               511-798
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               214
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               68, 129
               

               Conread position:
               523-797
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 0
               

               Conread position:
               553-797
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               32, 191
               

               Conread position:
               658-798
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               76, 0
               
Show alignments to all cow chromosomes.