Cow genome map
Conread name: | Ss1.1-Pig4-TMW8026N13.3 |
Conread position: | 2-289 |
Cow position: | chr26:34012554-34012834 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 195 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 198, 47 |
Conread position: | 2-331 |
Cow position: | chr26:9846601-9846278 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 227 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 240, 78 |
Conread position: | 13-312 |
Cow position: | chr26:8918524-8918817 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 168 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 10, 199 |
Conread position: | 19-801 |
Cow position: | chr26:9563814-9563032 (view UCSC Genome Browser custom track) |
Alignm length: | 787 |
Alignm identity: | 576 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 179, 185 |
Conread position: | 20-798 |
Cow position: | chr26:3031265-3030507 (view UCSC Genome Browser custom track) |
Alignm length: | 782 |
Alignm identity: | 559 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 208 |
Conread position: | 22-338 |
Cow position: | chr26:24201169-24201486 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 307, 0 |
Conread position: | 22-339 |
Cow position: | chr26:19998034-19998351 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 189, 214 |
Conread position: | 22-466 |
Cow position: | chr26:9112013-9112457 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 22-781 |
Cow position: | chr26:20262419-20263155 (view UCSC Genome Browser custom track) |
Alignm length: | 779 |
Alignm identity: | 510 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 302, 19 |
Conread position: | 22-798 |
Cow position: | chr26:2198193-2198948 (view UCSC Genome Browser custom track) |
Alignm length: | 778 |
Alignm identity: | 565 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 555, 143 |
Conread position: | 22-798 |
Cow position: | chr26:2352801-2352038 (view UCSC Genome Browser custom track) |
Alignm length: | 778 |
Alignm identity: | 568 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 555, 133 |
Conread position: | 22-798 |
Cow position: | chr26:11254514-11253734 (view UCSC Genome Browser custom track) |
Alignm length: | 785 |
Alignm identity: | 573 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 138, 70 |
Conread position: | 22-798 |
Cow position: | chr26:12589013-12588243 (view UCSC Genome Browser custom track) |
Alignm length: | 781 |
Alignm identity: | 583 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 217, 70 |
Conread position: | 22-798 |
Cow position: | chr26:30782316-30783065 (view UCSC Genome Browser custom track) |
Alignm length: | 778 |
Alignm identity: | 540 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 551, 223 |
Conread position: | 23-270 |
Cow position: | chr26:30590692-30590445 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 160 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 23-790 |
Cow position: | chr26:17397388-17396617 (view UCSC Genome Browser custom track) |
Alignm length: | 776 |
Alignm identity: | 557 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 187 |
Conread position: | 23-797 |
Cow position: | chr26:19351965-19351192 (view UCSC Genome Browser custom track) |
Alignm length: | 777 |
Alignm identity: | 577 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 554, 405 |
Conread position: | 26-403 |
Cow position: | chr26:6516416-6516783 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 249 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 22, 37 |
Conread position: | 32-798 |
Cow position: | chr26:8869436-8870204 (view UCSC Genome Browser custom track) |
Alignm length: | 775 |
Alignm identity: | 557 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 67 |
Conread position: | 49-548 |
Cow position: | chr26:3074108-3074594 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 298 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 290, 156 |
Conread position: | 55-499 |
Cow position: | chr26:23605328-23604878 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 160, 17 |
Conread position: | 55-538 |
Cow position: | chr26:19535758-19536246 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 315 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 46, 97 |
Conread position: | 60-471 |
Cow position: | chr26:6489444-6489042 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 263 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 6, 176 |
Conread position: | 68-630 |
Cow position: | chr26:11301386-11301941 (view UCSC Genome Browser custom track) |
Alignm length: | 574 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 85 |
Conread position: | 78-803 |
Cow position: | chr26:5674773-5675488 (view UCSC Genome Browser custom track) |
Alignm length: | 732 |
Alignm identity: | 529 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 228, 69 |
Conread position: | 79-327 |
Cow position: | chr26:12655561-12655798 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 178 |
Alignm E-value: | 9e-33 |
Alignm gaps (pig, cow): | 49, 137 |
Conread position: | 81-448 |
Cow position: | chr26:9851038-9850649 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 272 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 31, 23 |
Conread position: | 81-448 |
Cow position: | chr26:9854502-9854115 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 272 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 31, 23 |
Conread position: | 93-669 |
Cow position: | chr26:20254696-20255247 (view UCSC Genome Browser custom track) |
Alignm length: | 582 |
Alignm identity: | 433 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 484, 14 |
Conread position: | 94-521 |
Cow position: | chr26:12665606-12666015 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 281 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 97-797 |
Cow position: | chr26:12574774-12574087 (view UCSC Genome Browser custom track) |
Alignm length: | 706 |
Alignm identity: | 545 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 108 |
Conread position: | 101-801 |
Cow position: | chr26:8283415-8282738 (view UCSC Genome Browser custom track) |
Alignm length: | 705 |
Alignm identity: | 472 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 44 |
Conread position: | 105-800 |
Cow position: | chr26:25033597-25034287 (view UCSC Genome Browser custom track) |
Alignm length: | 707 |
Alignm identity: | 435 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 45, 19 |
Conread position: | 108-798 |
Cow position: | chr26:3691434-3692113 (view UCSC Genome Browser custom track) |
Alignm length: | 698 |
Alignm identity: | 510 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 213 |
Conread position: | 109-801 |
Cow position: | chr26:1409894-1410568 (view UCSC Genome Browser custom track) |
Alignm length: | 708 |
Alignm identity: | 449 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 27, 104 |
Conread position: | 112-532 |
Cow position: | chr26:6850537-6850119 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 33 |
Conread position: | 114-798 |
Cow position: | chr26:18854734-18855410 (view UCSC Genome Browser custom track) |
Alignm length: | 687 |
Alignm identity: | 527 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 237, 97 |
Conread position: | 117-798 |
Cow position: | chr26:15145115-15144438 (view UCSC Genome Browser custom track) |
Alignm length: | 685 |
Alignm identity: | 510 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 49 |
Conread position: | 118-793 |
Cow position: | chr26:4605537-4604871 (view UCSC Genome Browser custom track) |
Alignm length: | 677 |
Alignm identity: | 488 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 459, 137 |
Conread position: | 121-801 |
Cow position: | chr26:12025907-12025238 (view UCSC Genome Browser custom track) |
Alignm length: | 698 |
Alignm identity: | 421 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 17, 49 |
Conread position: | 123-705 |
Cow position: | chr26:16904435-16905001 (view UCSC Genome Browser custom track) |
Alignm length: | 591 |
Alignm identity: | 405 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 138, 57 |
Conread position: | 185-593 |
Cow position: | chr26:11537122-11536719 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 10 |
Conread position: | 224-641 |
Cow position: | chr26:5551522-5551939 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 284 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 24, 181 |
Conread position: | 251-793 |
Cow position: | chr26:30589592-30589055 (view UCSC Genome Browser custom track) |
Alignm length: | 551 |
Alignm identity: | 408 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 326, 15 |
Conread position: | 278-456 |
Cow position: | chr26:6602009-6602188 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 128 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 163, 0 |
Conread position: | 318-799 |
Cow position: | chr26:12656138-12656595 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 142, 27 |
Conread position: | 328-505 |
Cow position: | chr26:12659837-12659661 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 132 |
Alignm E-value: | 8e-31 |
Alignm gaps (pig, cow): | 144, 0 |
Conread position: | 332-543 |
Cow position: | chr26:9845755-9845547 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 148 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 104, 0 |
Conread position: | 362-566 |
Cow position: | chr26:21350263-21350465 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 151 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 443-798 |
Cow position: | chr26:8918818-8919172 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 136, 30 |
Conread position: | 464-751 |
Cow position: | chr26:17997010-17996725 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 203 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 66, 9 |
Conread position: | 464-801 |
Cow position: | chr26:12666095-12666427 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 44 |
Conread position: | 467-798 |
Cow position: | chr26:18852211-18852541 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 112, 6 |
Conread position: | 472-797 |
Cow position: | chr26:11635941-11635624 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 211 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 37, 15 |
Conread position: | 492-762 |
Cow position: | chr26:23603751-23603481 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 492-798 |
Cow position: | chr26:9112753-9113060 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 0 |
Conread position: | 498-779 |
Cow position: | chr26:9845555-9845275 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 30 |
Conread position: | 503-729 |
Cow position: | chr26:4334169-4334398 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 184 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 508-799 |
Cow position: | chr26:9849894-9849603 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 169 |
Conread position: | 508-799 |
Cow position: | chr26:9853404-9853114 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 167, 0 |
Conread position: | 511-798 |
Cow position: | chr26:4806507-4806239 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 214 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 68, 129 |
Conread position: | 523-797 |
Cow position: | chr26:6849390-6849115 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 271, 0 |
Conread position: | 553-797 |
Cow position: | chr26:23043214-23043459 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 168 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 32, 191 |
Conread position: | 658-798 |
Cow position: | chr26:20255382-20255516 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 108 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 76, 0 |
Show alignments to all cow chromosomes.