Cow genome map

Conread name: Ss1.1-Pig4-TMW8026N13.3

Conread position: 2-258
Cow position:
Alignm length: 257
Alignm identity: 175
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 6, 0

Conread position: 2-270
Cow position:
Alignm length: 273
Alignm identity: 186
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 15, 25

Conread position: 2-279
Cow position:
Alignm length: 291
Alignm identity: 192
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 2-297
Cow position:
Alignm length: 298
Alignm identity: 208
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 19, 90

Conread position: 2-459
Cow position:
Alignm length: 461
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 97

Conread position: 2-514
Cow position:
Alignm length: 515
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 9

Conread position: 2-798
Cow position:
Alignm length: 798
Alignm identity: 592
Alignm E-value: 0
Alignm gaps (pig, cow): 575, 25

Conread position: 2-799
Cow position:
Alignm length: 804
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 97

Conread position: 2-801
Cow position:
Alignm length: 803
Alignm identity: 586
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 65

Conread position: 2-801
Cow position:
Alignm length: 804
Alignm identity: 599
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 82

Conread position: 2-804
Cow position:
Alignm length: 808
Alignm identity: 576
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 116

Conread position: 5-270
Cow position:
Alignm length: 267
Alignm identity: 183
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 230, 0

Conread position: 5-531
Cow position:
Alignm length: 527
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 5-655
Cow position:
Alignm length: 653
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 97

Conread position: 12-323
Cow position:
Alignm length: 313
Alignm identity: 219
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 189, 136

Conread position: 12-488
Cow position:
Alignm length: 477
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 18-803
Cow position:
Alignm length: 789
Alignm identity: 581
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 82

Conread position: 19-777
Cow position:
Alignm length: 762
Alignm identity: 561
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 23

Conread position: 19-798
Cow position:
Alignm length: 785
Alignm identity: 569
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 24

Conread position: 20-798
Cow position:
Alignm length: 784
Alignm identity: 582
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 56

Conread position: 22-291
Cow position:
Alignm length: 270
Alignm identity: 183
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 22-657
Cow position:
Alignm length: 638
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 198

Conread position: 22-798
Cow position:
Alignm length: 782
Alignm identity: 567
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 112

Conread position: 22-798
Cow position:
Alignm length: 782
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 211

Conread position: 22-798
Cow position:
Alignm length: 779
Alignm identity: 578
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 205

Conread position: 22-798
Cow position:
Alignm length: 779
Alignm identity: 572
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 451

Conread position: 23-265
Cow position:
Alignm length: 243
Alignm identity: 160
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 23-270
Cow position:
Alignm length: 248
Alignm identity: 162
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 23-270
Cow position:
Alignm length: 250
Alignm identity: 170
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 69, 34

Conread position: 23-774
Cow position:
Alignm length: 755
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 385, 449

Conread position: 23-797
Cow position:
Alignm length: 779
Alignm identity: 565
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 121

Conread position: 23-797
Cow position:
Alignm length: 782
Alignm identity: 569
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 307

Conread position: 23-797
Cow position:
Alignm length: 782
Alignm identity: 568
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 182

Conread position: 23-797
Cow position:
Alignm length: 778
Alignm identity: 571
Alignm E-value: 0
Alignm gaps (pig, cow): 421, 405

Conread position: 23-798
Cow position:
Alignm length: 778
Alignm identity: 570
Alignm E-value: 0
Alignm gaps (pig, cow): 512, 449

Conread position: 23-803
Cow position:
Alignm length: 783
Alignm identity: 568
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 338

Conread position: 26-420
Cow position:
Alignm length: 403
Alignm identity: 266
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 31, 26

Conread position: 26-798
Cow position:
Alignm length: 787
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 24

Conread position: 30-271
Cow position:
Alignm length: 242
Alignm identity: 172
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 11, 0

Conread position: 30-797
Cow position:
Alignm length: 770
Alignm identity: 559
Alignm E-value: 0
Alignm gaps (pig, cow): 549, 11

Conread position: 30-797
Cow position:
Alignm length: 772
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 11

Conread position: 38-488
Cow position:
Alignm length: 451
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 348, 0

Conread position: 38-803
Cow position:
Alignm length: 769
Alignm identity: 568
Alignm E-value: 0
Alignm gaps (pig, cow): 541, 178

Conread position: 39-616
Cow position:
Alignm length: 587
Alignm identity: 353
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 9, 105

Conread position: 41-420
Cow position:
Alignm length: 380
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 52-428
Cow position:
Alignm length: 379
Alignm identity: 240
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 14, 40

Conread position: 56-608
Cow position:
Alignm length: 560
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 84

Conread position: 56-760
Cow position:
Alignm length: 707
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 521, 155

Conread position: 58-797
Cow position:
Alignm length: 744
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 147

Conread position: 68-506
Cow position:
Alignm length: 446
Alignm identity: 260
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 82, 33

Conread position: 68-798
Cow position:
Alignm length: 735
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 5

Conread position: 75-803
Cow position:
Alignm length: 748
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 177

Conread position: 78-797
Cow position:
Alignm length: 725
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 25

Conread position: 79-368
Cow position:
Alignm length: 296
Alignm identity: 202
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 23, 56

Conread position: 85-798
Cow position:
Alignm length: 723
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 18

Conread position: 97-514
Cow position:
Alignm length: 418
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 0

Conread position: 99-798
Cow position:
Alignm length: 705
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 313

Conread position: 111-801
Cow position:
Alignm length: 695
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 42

Conread position: 127-597
Cow position:
Alignm length: 472
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 448, 48

Conread position: 128-549
Cow position:
Alignm length: 435
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 185

Conread position: 138-797
Cow position:
Alignm length: 662
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 441, 173

Conread position: 140-793
Cow position:
Alignm length: 666
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 333, 100

Conread position: 149-798
Cow position:
Alignm length: 654
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 62

Conread position: 156-798
Cow position:
Alignm length: 649
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 59

Conread position: 170-618
Cow position:
Alignm length: 454
Alignm identity: 292
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 16, 148

Conread position: 171-708
Cow position:
Alignm length: 546
Alignm identity: 347
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 43, 63

Conread position: 173-436
Cow position:
Alignm length: 270
Alignm identity: 176
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 67, 58

Conread position: 195-798
Cow position:
Alignm length: 605
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 382, 55

Conread position: 245-606
Cow position:
Alignm length: 365
Alignm identity: 235
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 189, 66

Conread position: 247-435
Cow position:
Alignm length: 189
Alignm identity: 141
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 75, 0

Conread position: 249-756
Cow position:
Alignm length: 510
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 98

Conread position: 255-778
Cow position:
Alignm length: 526
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 148

Conread position: 262-485
Cow position:
Alignm length: 225
Alignm identity: 171
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 146, 211

Conread position: 265-803
Cow position:
Alignm length: 542
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 207

Conread position: 266-638
Cow position:
Alignm length: 378
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 206

Conread position: 267-512
Cow position:
Alignm length: 246
Alignm identity: 183
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 74, 0

Conread position: 292-790
Cow position:
Alignm length: 502
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 62

Conread position: 296-448
Cow position:
Alignm length: 153
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 305-797
Cow position:
Alignm length: 496
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 16

Conread position: 314-711
Cow position:
Alignm length: 404
Alignm identity: 254
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 17, 73

Conread position: 318-793
Cow position:
Alignm length: 476
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 0

Conread position: 318-797
Cow position:
Alignm length: 482
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 84

Conread position: 321-735
Cow position:
Alignm length: 418
Alignm identity: 260
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 80, 91

Conread position: 325-757
Cow position:
Alignm length: 436
Alignm identity: 284
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 226, 19

Conread position: 331-734
Cow position:
Alignm length: 408
Alignm identity: 271
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 94, 5

Conread position: 332-625
Cow position:
Alignm length: 303
Alignm identity: 209
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 26, 92

Conread position: 332-790
Cow position:
Alignm length: 461
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 94

Conread position: 338-803
Cow position:
Alignm length: 470
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 9

Conread position: 364-789
Cow position:
Alignm length: 443
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 65

Conread position: 374-797
Cow position:
Alignm length: 426
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 54

Conread position: 387-589
Cow position:
Alignm length: 204
Alignm identity: 152
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 190, 85

Conread position: 392-798
Cow position:
Alignm length: 408
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 81

Conread position: 443-777
Cow position:
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 62

Conread position: 472-801
Cow position:
Alignm length: 335
Alignm identity: 226
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 63, 94

Conread position: 473-698
Cow position:
Alignm length: 227
Alignm identity: 153
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 100, 123

Conread position: 476-790
Cow position:
Alignm length: 317
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 94

Conread position: 476-797
Cow position:
Alignm length: 325
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 476-797
Cow position:
Alignm length: 324
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 497-797
Cow position:
Alignm length: 303
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 499-801
Cow position:
Alignm length: 305
Alignm identity: 204
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 66, 15

Conread position: 527-798
Cow position:
Alignm length: 273
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 13

Conread position: 528-777
Cow position:
Alignm length: 254
Alignm identity: 179
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 16, 42

Conread position: 528-800
Cow position:
Alignm length: 275
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 101

Conread position: 532-801
Cow position:
Alignm length: 283
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 12

Conread position: 533-794
Cow position:
Alignm length: 263
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 73

Conread position: 544-771
Cow position:
Alignm length: 229
Alignm identity: 162
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 35, 5

Conread position: 545-798
Cow position:
Alignm length: 262
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 177

Conread position: 545-801
Cow position:
Alignm length: 259
Alignm identity: 185
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 40, 81

Conread position: 563-799
Cow position:
Alignm length: 240
Alignm identity: 174
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 19, 0

Conread position: 572-798
Cow position:
Alignm length: 227
Alignm identity: 146
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 59, 0

Conread position: 576-762
Cow position:
Alignm length: 189
Alignm identity: 144
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 158, 19

Conread position: 578-798
Cow position:
Alignm length: 221
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 585-798
Cow position:
Alignm length: 214
Alignm identity: 159
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 13, 0

Conread position: 586-771
Cow position:
Alignm length: 200
Alignm identity: 142
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 599-797
Cow position:
Alignm length: 200
Alignm identity: 159
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 195, 81

Conread position: 599-801
Cow position:
Alignm length: 203
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 604-801
Cow position:
Alignm length: 199
Alignm identity: 140
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 137, 103

Conread position: 621-797
Cow position:
Alignm length: 178
Alignm identity: 147
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 91, 97

Conread position: 623-797
Cow position:
Alignm length: 176
Alignm identity: 134
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 171, 84

Conread position: 633-798
Cow position:
Alignm length: 166
Alignm identity: 140
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 655-803
Cow position:
Alignm length: 151
Alignm identity: 121
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 139, 0

Conread position: 669-798
Cow position:
Alignm length: 130
Alignm identity: 111
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.