Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8026N13.3 |
| Conread position: | 1-252 |
| Cow position: | chr29:21431869-21431617 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 88, 204 |
| Conread position: | 2-238 |
| Cow position: | chr29:8663760-8663987 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 2-797 |
| Cow position: | chr29:16022019-16022799 (view UCSC Genome Browser custom track) |
| Alignm length: | 800 |
| Alignm identity: | 554 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 135 |
| Conread position: | 2-797 |
| Cow position: | chr29:43322034-43322823 (view UCSC Genome Browser custom track) |
| Alignm length: | 799 |
| Alignm identity: | 586 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 18 |
| Conread position: | 2-798 |
| Cow position: | chr29:35296351-35297143 (view UCSC Genome Browser custom track) |
| Alignm length: | 807 |
| Alignm identity: | 579 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 51 |
| Conread position: | 2-801 |
| Cow position: | chr29:2750897-2750149 (view UCSC Genome Browser custom track) |
| Alignm length: | 802 |
| Alignm identity: | 559 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 466, 88 |
| Conread position: | 5-798 |
| Cow position: | chr29:40503502-40502712 (view UCSC Genome Browser custom track) |
| Alignm length: | 796 |
| Alignm identity: | 573 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 572, 467 |
| Conread position: | 12-797 |
| Cow position: | chr29:2099332-2100114 (view UCSC Genome Browser custom track) |
| Alignm length: | 790 |
| Alignm identity: | 580 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 14 |
| Conread position: | 12-803 |
| Cow position: | chr29:10648759-10647978 (view UCSC Genome Browser custom track) |
| Alignm length: | 793 |
| Alignm identity: | 563 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 567, 14 |
| Conread position: | 22-209 |
| Cow position: | chr29:18857292-18857105 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 22-466 |
| Cow position: | chr29:13577921-13578356 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 345, 189 |
| Conread position: | 22-684 |
| Cow position: | chr29:15969646-15968996 (view UCSC Genome Browser custom track) |
| Alignm length: | 665 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 19 |
| Conread position: | 22-689 |
| Cow position: | chr29:16109222-16109887 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 225 |
| Conread position: | 22-729 |
| Cow position: | chr29:32315536-32316241 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 160 |
| Conread position: | 22-794 |
| Cow position: | chr29:15895352-15894585 (view UCSC Genome Browser custom track) |
| Alignm length: | 776 |
| Alignm identity: | 568 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 112 |
| Conread position: | 22-798 |
| Cow position: | chr29:611119-610343 (view UCSC Genome Browser custom track) |
| Alignm length: | 782 |
| Alignm identity: | 566 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 189 |
| Conread position: | 22-798 |
| Cow position: | chr29:27250838-27250073 (view UCSC Genome Browser custom track) |
| Alignm length: | 778 |
| Alignm identity: | 569 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 555, 19 |
| Conread position: | 22-801 |
| Cow position: | chr29:30811040-30811794 (view UCSC Genome Browser custom track) |
| Alignm length: | 788 |
| Alignm identity: | 576 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 20 |
| Conread position: | 22-804 |
| Cow position: | chr29:104078-104839 (view UCSC Genome Browser custom track) |
| Alignm length: | 788 |
| Alignm identity: | 571 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 15 |
| Conread position: | 23-354 |
| Cow position: | chr29:45587803-45587472 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 23-633 |
| Cow position: | chr29:21246067-21246674 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 325, 40 |
| Conread position: | 23-797 |
| Cow position: | chr29:7431721-7430950 (view UCSC Genome Browser custom track) |
| Alignm length: | 777 |
| Alignm identity: | 564 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 554, 449 |
| Conread position: | 23-797 |
| Cow position: | chr29:26165323-26164553 (view UCSC Genome Browser custom track) |
| Alignm length: | 777 |
| Alignm identity: | 571 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 556, 69 |
| Conread position: | 23-797 |
| Cow position: | chr29:32539306-32540079 (view UCSC Genome Browser custom track) |
| Alignm length: | 779 |
| Alignm identity: | 576 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 46 |
| Conread position: | 23-797 |
| Cow position: | chr29:38226490-38227249 (view UCSC Genome Browser custom track) |
| Alignm length: | 785 |
| Alignm identity: | 559 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 316, 180 |
| Conread position: | 23-797 |
| Cow position: | chr29:45459219-45459985 (view UCSC Genome Browser custom track) |
| Alignm length: | 780 |
| Alignm identity: | 568 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 554, 84 |
| Conread position: | 23-798 |
| Cow position: | chr29:48981-48211 (view UCSC Genome Browser custom track) |
| Alignm length: | 778 |
| Alignm identity: | 556 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 440, 405 |
| Conread position: | 23-803 |
| Cow position: | chr29:20250654-20251435 (view UCSC Genome Browser custom track) |
| Alignm length: | 784 |
| Alignm identity: | 557 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 545, 449 |
| Conread position: | 27-801 |
| Cow position: | chr29:30108608-30109397 (view UCSC Genome Browser custom track) |
| Alignm length: | 818 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 76 |
| Conread position: | 29-645 |
| Cow position: | chr29:28061165-28060548 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 198 |
| Conread position: | 30-797 |
| Cow position: | chr29:23975336-23976109 (view UCSC Genome Browser custom track) |
| Alignm length: | 777 |
| Alignm identity: | 561 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 314, 11 |
| Conread position: | 37-798 |
| Cow position: | chr29:6266982-6266232 (view UCSC Genome Browser custom track) |
| Alignm length: | 763 |
| Alignm identity: | 561 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 540, 16 |
| Conread position: | 38-797 |
| Cow position: | chr29:19623734-19622978 (view UCSC Genome Browser custom track) |
| Alignm length: | 762 |
| Alignm identity: | 563 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 523, 291 |
| Conread position: | 38-797 |
| Cow position: | chr29:19652618-19653377 (view UCSC Genome Browser custom track) |
| Alignm length: | 767 |
| Alignm identity: | 570 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 166 |
| Conread position: | 41-790 |
| Cow position: | chr29:39080193-39079451 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 547 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 536, 431 |
| Conread position: | 41-797 |
| Cow position: | chr29:10824443-10823700 (view UCSC Genome Browser custom track) |
| Alignm length: | 762 |
| Alignm identity: | 541 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 291, 139 |
| Conread position: | 41-797 |
| Cow position: | chr29:25933031-25932275 (view UCSC Genome Browser custom track) |
| Alignm length: | 759 |
| Alignm identity: | 561 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 538, 370 |
| Conread position: | 41-798 |
| Cow position: | chr29:2841852-2841104 (view UCSC Genome Browser custom track) |
| Alignm length: | 760 |
| Alignm identity: | 565 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 476, 295 |
| Conread position: | 44-340 |
| Cow position: | chr29:14368462-14368759 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 92, 190 |
| Conread position: | 53-796 |
| Cow position: | chr29:35196211-35196931 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 19 |
| Conread position: | 59-798 |
| Cow position: | chr29:5957138-5957873 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 519, 31 |
| Conread position: | 67-434 |
| Cow position: | chr29:803790-803420 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 248 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 148, 32 |
| Conread position: | 67-531 |
| Cow position: | chr29:32640329-32640779 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 309 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 157, 25 |
| Conread position: | 67-552 |
| Cow position: | chr29:32731420-32731906 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 316 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 25, 111 |
| Conread position: | 67-690 |
| Cow position: | chr29:4635421-4634815 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 38 |
| Conread position: | 69-393 |
| Cow position: | chr29:32890749-32891076 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 159, 246 |
| Conread position: | 69-480 |
| Cow position: | chr29:9644180-9643769 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 351, 254 |
| Conread position: | 74-383 |
| Cow position: | chr29:10843838-10844137 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 54, 70 |
| Conread position: | 75-801 |
| Cow position: | chr29:16017580-16016882 (view UCSC Genome Browser custom track) |
| Alignm length: | 732 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 269, 183 |
| Conread position: | 76-801 |
| Cow position: | chr29:19893315-19894044 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 20 |
| Conread position: | 82-798 |
| Cow position: | chr29:15950623-15949921 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 142 |
| Conread position: | 83-584 |
| Cow position: | chr29:32576668-32576176 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 321 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 12, 25 |
| Conread position: | 85-311 |
| Cow position: | chr29:34752128-34751910 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 9, 25 |
| Conread position: | 85-505 |
| Cow position: | chr29:12796905-12796498 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 34 |
| Conread position: | 97-792 |
| Cow position: | chr29:10848535-10847825 (view UCSC Genome Browser custom track) |
| Alignm length: | 730 |
| Alignm identity: | 533 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 11 |
| Conread position: | 97-798 |
| Cow position: | chr29:11048851-11049547 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 243 |
| Conread position: | 100-727 |
| Cow position: | chr29:32948721-32949343 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 396 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 36, 22 |
| Conread position: | 101-797 |
| Cow position: | chr29:36599735-36599058 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 442 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 137, 51 |
| Conread position: | 104-508 |
| Cow position: | chr29:31121384-31121784 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 123 |
| Conread position: | 105-640 |
| Cow position: | chr29:16176172-16175659 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 337 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 45, 35 |
| Conread position: | 108-798 |
| Cow position: | chr29:16769718-16770392 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 10 |
| Conread position: | 109-676 |
| Cow position: | chr29:32220306-32220869 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 39 |
| Conread position: | 109-798 |
| Cow position: | chr29:410945-410256 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 470, 12 |
| Conread position: | 109-801 |
| Cow position: | chr29:8063326-8062622 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 444 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 131, 48 |
| Conread position: | 110-797 |
| Cow position: | chr29:34800220-34799538 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 469, 76 |
| Conread position: | 115-783 |
| Cow position: | chr29:14013059-14013718 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 30 |
| Conread position: | 115-783 |
| Cow position: | chr29:14073354-14072693 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 31 |
| Conread position: | 118-797 |
| Cow position: | chr29:43366401-43365734 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 412, 41 |
| Conread position: | 118-798 |
| Cow position: | chr29:21543782-21543100 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 127 |
| Conread position: | 118-798 |
| Cow position: | chr29:27041170-27040503 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 87 |
| Conread position: | 123-400 |
| Cow position: | chr29:2468344-2468058 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 200, 9 |
| Conread position: | 123-794 |
| Cow position: | chr29:7840396-7841061 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 8 |
| Conread position: | 123-797 |
| Cow position: | chr29:2689499-2690169 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 90 |
| Conread position: | 128-801 |
| Cow position: | chr29:1714860-1715513 (view UCSC Genome Browser custom track) |
| Alignm length: | 678 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 95 |
| Conread position: | 132-552 |
| Cow position: | chr29:34871941-34872350 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 20, 9 |
| Conread position: | 167-801 |
| Cow position: | chr29:37046508-37045871 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 405 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 191, 118 |
| Conread position: | 170-801 |
| Cow position: | chr29:30261784-30261154 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 388 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 185, 74 |
| Conread position: | 218-617 |
| Cow position: | chr29:31180815-31181212 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 359, 16 |
| Conread position: | 226-485 |
| Cow position: | chr29:9855220-9854965 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 227-625 |
| Cow position: | chr29:21427355-21426962 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 350, 17 |
| Conread position: | 227-693 |
| Cow position: | chr29:13853321-13852861 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 350, 65 |
| Conread position: | 232-639 |
| Cow position: | chr29:39313886-39313481 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 270 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 163, 122 |
| Conread position: | 235-689 |
| Cow position: | chr29:28630283-28630733 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 280 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 199, 92 |
| Conread position: | 254-400 |
| Cow position: | chr29:42801913-42802055 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 254-475 |
| Cow position: | chr29:42650053-42650271 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 146, 7 |
| Conread position: | 265-780 |
| Cow position: | chr29:17662658-17663155 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 207 |
| Conread position: | 273-691 |
| Cow position: | chr29:7855719-7856138 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 281 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 138, 44 |
| Conread position: | 279-583 |
| Cow position: | chr29:2368148-2367855 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 299, 145 |
| Conread position: | 283-779 |
| Cow position: | chr29:11855354-11855852 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 77 |
| Conread position: | 293-687 |
| Cow position: | chr29:24198855-24198461 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 260 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 62, 29 |
| Conread position: | 319-648 |
| Cow position: | chr29:11229297-11228973 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 21, 57 |
| Conread position: | 320-798 |
| Cow position: | chr29:34925263-34925748 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 325-801 |
| Cow position: | chr29:22966455-22965988 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 300 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 5, 22 |
| Conread position: | 347-797 |
| Cow position: | chr29:19884888-19885339 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 126 |
| Conread position: | 360-800 |
| Cow position: | chr29:13669470-13669024 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 292 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 155, 20 |
| Conread position: | 361-797 |
| Cow position: | chr29:27981085-27980650 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 112 |
| Conread position: | 367-552 |
| Cow position: | chr29:43791021-43791202 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 374-615 |
| Cow position: | chr29:5983334-5983094 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 54 |
| Conread position: | 376-775 |
| Cow position: | chr29:11841514-11841904 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 11 |
| Conread position: | 381-797 |
| Cow position: | chr29:14585780-14586191 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 93 |
| Conread position: | 388-708 |
| Cow position: | chr29:13648277-13648577 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 189, 86 |
| Conread position: | 396-798 |
| Cow position: | chr29:670189-669788 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 77 |
| Conread position: | 405-801 |
| Cow position: | chr29:45587469-45587086 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 68 |
| Conread position: | 443-777 |
| Cow position: | chr29:42650199-42650534 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 30 |
| Conread position: | 443-777 |
| Cow position: | chr29:42802059-42802394 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 30 |
| Conread position: | 443-798 |
| Cow position: | chr29:18857030-18856675 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 30 |
| Conread position: | 447-798 |
| Cow position: | chr29:2466418-2466065 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 26 |
| Conread position: | 455-798 |
| Cow position: | chr29:13581998-13582337 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 18 |
| Conread position: | 456-801 |
| Cow position: | chr29:803424-803084 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 22 |
| Conread position: | 464-801 |
| Cow position: | chr29:27845278-27845610 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 38, 9 |
| Conread position: | 465-801 |
| Cow position: | chr29:9643824-9643484 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 146 |
| Conread position: | 473-780 |
| Cow position: | chr29:4056093-4056402 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 29 |
| Conread position: | 492-786 |
| Cow position: | chr29:35034049-35033755 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 28, 155 |
| Conread position: | 492-797 |
| Cow position: | chr29:12796400-12796114 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 25 |
| Conread position: | 497-797 |
| Cow position: | chr29:10844212-10844508 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 12, 20 |
| Conread position: | 584-803 |
| Cow position: | chr29:18395627-18395848 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 605-798 |
| Cow position: | chr29:31181492-31181684 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 155 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 614-799 |
| Cow position: | chr29:24709163-24708979 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 102, 38 |
| Conread position: | 621-798 |
| Cow position: | chr29:21426932-21426761 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 146 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 664-801 |
| Cow position: | chr29:14086313-14086179 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 668-801 |
| Cow position: | chr29:5983070-5982935 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 672-794 |
| Cow position: | chr29:15968718-15968596 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.