Cow genome map

Conread name: Ss1.1-Pig4-TMW8026N13.3

Conread position: 2-799
Cow position:
Alignm length: 806
Alignm identity: 576
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 15

Conread position: 2-804
Cow position:
Alignm length: 813
Alignm identity: 587
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 76

Conread position: 3-262
Cow position:
Alignm length: 261
Alignm identity: 173
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 11, 0

Conread position: 4-790
Cow position:
Alignm length: 788
Alignm identity: 568
Alignm E-value: 0
Alignm gaps (pig, cow): 575, 246

Conread position: 4-797
Cow position:
Alignm length: 800
Alignm identity: 577
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 86

Conread position: 5-371
Cow position:
Alignm length: 367
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 0

Conread position: 5-797
Cow position:
Alignm length: 796
Alignm identity: 580
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 11

Conread position: 5-797
Cow position:
Alignm length: 795
Alignm identity: 582
Alignm E-value: 0
Alignm gaps (pig, cow): 574, 73

Conread position: 5-803
Cow position:
Alignm length: 805
Alignm identity: 587
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 470

Conread position: 8-618
Cow position:
Alignm length: 616
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 59

Conread position: 12-320
Cow position:
Alignm length: 310
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 17

Conread position: 21-798
Cow position:
Alignm length: 779
Alignm identity: 570
Alignm E-value: 0
Alignm gaps (pig, cow): 558, 313

Conread position: 21-798
Cow position:
Alignm length: 779
Alignm identity: 572
Alignm E-value: 0
Alignm gaps (pig, cow): 557, 451

Conread position: 22-327
Cow position:
Alignm length: 308
Alignm identity: 210
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 78, 83

Conread position: 22-421
Cow position:
Alignm length: 401
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 70

Conread position: 22-507
Cow position:
Alignm length: 487
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 54

Conread position: 22-720
Cow position:
Alignm length: 702
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 61

Conread position: 22-794
Cow position:
Alignm length: 775
Alignm identity: 570
Alignm E-value: 0
Alignm gaps (pig, cow): 517, 450

Conread position: 22-798
Cow position:
Alignm length: 778
Alignm identity: 564
Alignm E-value: 0
Alignm gaps (pig, cow): 557, 123

Conread position: 22-798
Cow position:
Alignm length: 779
Alignm identity: 564
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 53

Conread position: 22-798
Cow position:
Alignm length: 779
Alignm identity: 569
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 189

Conread position: 22-798
Cow position:
Alignm length: 794
Alignm identity: 577
Alignm E-value: 0
Alignm gaps (pig, cow): 517, 450

Conread position: 22-798
Cow position:
Alignm length: 778
Alignm identity: 572
Alignm E-value: 0
Alignm gaps (pig, cow): 557, 140

Conread position: 22-798
Cow position:
Alignm length: 778
Alignm identity: 572
Alignm E-value: 0
Alignm gaps (pig, cow): 555, 189

Conread position: 22-798
Cow position:
Alignm length: 784
Alignm identity: 577
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 209

Conread position: 22-798
Cow position:
Alignm length: 780
Alignm identity: 559
Alignm E-value: 0
Alignm gaps (pig, cow): 360, 96

Conread position: 22-798
Cow position:
Alignm length: 780
Alignm identity: 582
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 214

Conread position: 23-320
Cow position:
Alignm length: 298
Alignm identity: 201
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 33, 0

Conread position: 23-336
Cow position:
Alignm length: 315
Alignm identity: 220
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 117, 18

Conread position: 23-750
Cow position:
Alignm length: 732
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 19

Conread position: 23-777
Cow position:
Alignm length: 757
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 182

Conread position: 23-783
Cow position:
Alignm length: 764
Alignm identity: 570
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 19

Conread position: 23-796
Cow position:
Alignm length: 776
Alignm identity: 564
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 45

Conread position: 23-797
Cow position:
Alignm length: 776
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 771, 405

Conread position: 23-797
Cow position:
Alignm length: 795
Alignm identity: 566
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 452

Conread position: 23-797
Cow position:
Alignm length: 777
Alignm identity: 567
Alignm E-value: 0
Alignm gaps (pig, cow): 554, 449

Conread position: 23-797
Cow position:
Alignm length: 780
Alignm identity: 570
Alignm E-value: 0
Alignm gaps (pig, cow): 322, 363

Conread position: 23-797
Cow position:
Alignm length: 778
Alignm identity: 571
Alignm E-value: 0
Alignm gaps (pig, cow): 512, 449

Conread position: 23-797
Cow position:
Alignm length: 778
Alignm identity: 576
Alignm E-value: 0
Alignm gaps (pig, cow): 367, 60

Conread position: 24-354
Cow position:
Alignm length: 335
Alignm identity: 218
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 32, 40

Conread position: 29-798
Cow position:
Alignm length: 784
Alignm identity: 567
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 318

Conread position: 30-579
Cow position:
Alignm length: 555
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 11

Conread position: 30-797
Cow position:
Alignm length: 770
Alignm identity: 568
Alignm E-value: 0
Alignm gaps (pig, cow): 547, 11

Conread position: 38-797
Cow position:
Alignm length: 763
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 298

Conread position: 41-327
Cow position:
Alignm length: 289
Alignm identity: 201
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 216, 0

Conread position: 41-508
Cow position:
Alignm length: 489
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 103

Conread position: 51-798
Cow position:
Alignm length: 755
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 81

Conread position: 52-777
Cow position:
Alignm length: 736
Alignm identity: 451
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 26, 11

Conread position: 56-801
Cow position:
Alignm length: 749
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 117

Conread position: 56-801
Cow position:
Alignm length: 755
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 154

Conread position: 65-801
Cow position:
Alignm length: 741
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 402, 7

Conread position: 67-436
Cow position:
Alignm length: 380
Alignm identity: 255
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 95, 31

Conread position: 67-575
Cow position:
Alignm length: 517
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 25

Conread position: 69-568
Cow position:
Alignm length: 502
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 383, 120

Conread position: 69-757
Cow position:
Alignm length: 694
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 374, 30

Conread position: 75-486
Cow position:
Alignm length: 412
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 79-801
Cow position:
Alignm length: 728
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 180

Conread position: 82-470
Cow position:
Alignm length: 392
Alignm identity: 260
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 133, 22

Conread position: 82-754
Cow position:
Alignm length: 680
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 157

Conread position: 82-797
Cow position:
Alignm length: 718
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 497, 20

Conread position: 82-801
Cow position:
Alignm length: 723
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 497, 19

Conread position: 85-648
Cow position:
Alignm length: 569
Alignm identity: 361
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 36, 18

Conread position: 85-797
Cow position:
Alignm length: 718
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 390

Conread position: 86-801
Cow position:
Alignm length: 719
Alignm identity: 435
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 126, 13

Conread position: 95-801
Cow position:
Alignm length: 712
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 120

Conread position: 97-797
Cow position:
Alignm length: 708
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 107

Conread position: 97-801
Cow position:
Alignm length: 708
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 74

Conread position: 100-723
Cow position:
Alignm length: 647
Alignm identity: 401
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 143, 8

Conread position: 100-801
Cow position:
Alignm length: 716
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 48

Conread position: 100-803
Cow position:
Alignm length: 709
Alignm identity: 434
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 114, 65

Conread position: 102-784
Cow position:
Alignm length: 695
Alignm identity: 429
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 48, 33

Conread position: 105-800
Cow position:
Alignm length: 701
Alignm identity: 437
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 86, 95

Conread position: 108-719
Cow position:
Alignm length: 624
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 66

Conread position: 113-797
Cow position:
Alignm length: 689
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 92

Conread position: 115-332
Cow position:
Alignm length: 225
Alignm identity: 162
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 126, 0

Conread position: 115-780
Cow position:
Alignm length: 674
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 29

Conread position: 140-801
Cow position:
Alignm length: 665
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 80

Conread position: 149-401
Cow position:
Alignm length: 258
Alignm identity: 175
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 159, 78

Conread position: 149-797
Cow position:
Alignm length: 649
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 149-800
Cow position:
Alignm length: 661
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 142

Conread position: 170-467
Cow position:
Alignm length: 299
Alignm identity: 202
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 158, 41

Conread position: 177-631
Cow position:
Alignm length: 469
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 76

Conread position: 185-797
Cow position:
Alignm length: 616
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 289

Conread position: 215-758
Cow position:
Alignm length: 549
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 362, 49

Conread position: 220-798
Cow position:
Alignm length: 580
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 359, 25

Conread position: 222-708
Cow position:
Alignm length: 489
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 43

Conread position: 222-801
Cow position:
Alignm length: 609
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 20

Conread position: 222-801
Cow position:
Alignm length: 588
Alignm identity: 354
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 191, 68

Conread position: 237-801
Cow position:
Alignm length: 566
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 342, 13

Conread position: 273-801
Cow position:
Alignm length: 535
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 117

Conread position: 278-798
Cow position:
Alignm length: 523
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 47

Conread position: 281-471
Cow position:
Alignm length: 192
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 148

Conread position: 282-504
Cow position:
Alignm length: 224
Alignm identity: 173
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 139, 57

Conread position: 293-801
Cow position:
Alignm length: 512
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 52

Conread position: 294-801
Cow position:
Alignm length: 509
Alignm identity: 336
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 103, 143

Conread position: 305-728
Cow position:
Alignm length: 433
Alignm identity: 289
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 81, 16

Conread position: 307-691
Cow position:
Alignm length: 388
Alignm identity: 252
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 39, 115

Conread position: 318-797
Cow position:
Alignm length: 482
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 155

Conread position: 318-798
Cow position:
Alignm length: 483
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 14

Conread position: 319-797
Cow position:
Alignm length: 482
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 153

Conread position: 321-734
Cow position:
Alignm length: 418
Alignm identity: 263
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 102, 13

Conread position: 327-801
Cow position:
Alignm length: 476
Alignm identity: 310
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 449, 42

Conread position: 333-802
Cow position:
Alignm length: 477
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 15

Conread position: 334-647
Cow position:
Alignm length: 315
Alignm identity: 221
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 17, 120

Conread position: 334-796
Cow position:
Alignm length: 464
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 139

Conread position: 395-780
Cow position:
Alignm length: 388
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 79

Conread position: 395-801
Cow position:
Alignm length: 409
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 80

Conread position: 429-801
Cow position:
Alignm length: 374
Alignm identity: 262
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 150, 44

Conread position: 439-801
Cow position:
Alignm length: 369
Alignm identity: 240
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 31, 51

Conread position: 459-702
Cow position:
Alignm length: 247
Alignm identity: 183
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 120, 24

Conread position: 472-803
Cow position:
Alignm length: 335
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 0

Conread position: 478-797
Cow position:
Alignm length: 320
Alignm identity: 211
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 479-798
Cow position:
Alignm length: 321
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 185

Conread position: 483-777
Cow position:
Alignm length: 296
Alignm identity: 197
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 282, 38

Conread position: 492-797
Cow position:
Alignm length: 306
Alignm identity: 204
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 492-801
Cow position:
Alignm length: 313
Alignm identity: 204
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 53, 76

Conread position: 505-798
Cow position:
Alignm length: 295
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 535-789
Cow position:
Alignm length: 256
Alignm identity: 186
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 40, 57

Conread position: 537-801
Cow position:
Alignm length: 267
Alignm identity: 196
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 38, 15

Conread position: 553-771
Cow position:
Alignm length: 225
Alignm identity: 156
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 67

Conread position: 556-719
Cow position:
Alignm length: 168
Alignm identity: 132
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 23, 0

Conread position: 564-798
Cow position:
Alignm length: 236
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 578-777
Cow position:
Alignm length: 200
Alignm identity: 149
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 578-801
Cow position:
Alignm length: 224
Alignm identity: 159
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 609-797
Cow position:
Alignm length: 190
Alignm identity: 154
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 185, 0

Conread position: 614-797
Cow position:
Alignm length: 186
Alignm identity: 147
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 95, 47

Conread position: 623-797
Cow position:
Alignm length: 177
Alignm identity: 132
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 71, 0

Conread position: 640-798
Cow position:
Alignm length: 160
Alignm identity: 132
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 20, 0

Conread position: 640-798
Cow position:
Alignm length: 160
Alignm identity: 131
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 20, 0

Conread position: 655-798
Cow position:
Alignm length: 144
Alignm identity: 120
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 50, 0

Conread position: 659-804
Cow position:
Alignm length: 148
Alignm identity: 116
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 65, 0

Show alignments to all cow chromosomes.