Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8026N13.3
        

               Conread position:
               1-801
               

               Cow position:
               
               

               Alignm length:
               806
               

               Alignm identity:
               604
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               341, 89
               

               Conread position:
               1-803
               

               Cow position:
               
               

               Alignm length:
               807
               

               Alignm identity:
               584
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               347, 174
               

               Conread position:
               2-334
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               232
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               197, 35
               

               Conread position:
               2-385
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               2-400
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               2-471
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               426, 95
               

               Conread position:
               2-496
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               434, 59
               

               Conread position:
               2-536
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 15
               

               Conread position:
               2-546
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 34
               

               Conread position:
               2-759
               

               Cow position:
               
               

               Alignm length:
               760
               

               Alignm identity:
               556
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               211, 102
               

               Conread position:
               2-797
               

               Cow position:
               
               

               Alignm length:
               798
               

               Alignm identity:
               591
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 40
               

               Conread position:
               2-801
               

               Cow position:
               
               

               Alignm length:
               802
               

               Alignm identity:
               579
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               266, 28
               

               Conread position:
               2-801
               

               Cow position:
               
               

               Alignm length:
               830
               

               Alignm identity:
               578
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 37
               

               Conread position:
               2-803
               

               Cow position:
               
               

               Alignm length:
               811
               

               Alignm identity:
               593
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 9
               

               Conread position:
               5-613
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               334, 76
               

               Conread position:
               5-803
               

               Cow position:
               
               

               Alignm length:
               802
               

               Alignm identity:
               583
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               572, 467
               

               Conread position:
               8-798
               

               Cow position:
               
               

               Alignm length:
               794
               

               Alignm identity:
               574
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 9
               

               Conread position:
               19-758
               

               Cow position:
               
               

               Alignm length:
               743
               

               Alignm identity:
               524
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               371, 149
               

               Conread position:
               19-784
               

               Cow position:
               
               

               Alignm length:
               771
               

               Alignm identity:
               576
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 90
               

               Conread position:
               22-351
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               66, 226
               

               Conread position:
               22-370
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               319, 0
               

               Conread position:
               22-421
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 205
               

               Conread position:
               22-508
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 207
               

               Conread position:
               22-605
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               555, 69
               

               Conread position:
               22-634
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 84
               

               Conread position:
               22-794
               

               Cow position:
               
               

               Alignm length:
               775
               

               Alignm identity:
               573
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 190
               

               Conread position:
               22-797
               

               Cow position:
               
               

               Alignm length:
               780
               

               Alignm identity:
               559
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 56
               

               Conread position:
               22-797
               

               Cow position:
               
               

               Alignm length:
               783
               

               Alignm identity:
               563
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 189
               

               Conread position:
               22-798
               

               Cow position:
               
               

               Alignm length:
               779
               

               Alignm identity:
               577
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 112
               

               Conread position:
               22-798
               

               Cow position:
               
               

               Alignm length:
               777
               

               Alignm identity:
               560
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               22-798
               

               Cow position:
               
               

               Alignm length:
               779
               

               Alignm identity:
               562
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 110
               

               Conread position:
               22-798
               

               Cow position:
               
               

               Alignm length:
               780
               

               Alignm identity:
               579
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 189
               

               Conread position:
               22-798
               

               Cow position:
               
               

               Alignm length:
               780
               

               Alignm identity:
               573
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 159
               

               Conread position:
               22-798
               

               Cow position:
               
               

               Alignm length:
               779
               

               Alignm identity:
               572
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 110
               

               Conread position:
               22-798
               

               Cow position:
               
               

               Alignm length:
               785
               

               Alignm identity:
               581
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 86
               

               Conread position:
               22-798
               

               Cow position:
               
               

               Alignm length:
               784
               

               Alignm identity:
               566
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 83
               

               Conread position:
               22-798
               

               Cow position:
               
               

               Alignm length:
               778
               

               Alignm identity:
               560
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 140
               

               Conread position:
               22-798
               

               Cow position:
               
               

               Alignm length:
               781
               

               Alignm identity:
               575
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 177
               

               Conread position:
               22-798
               

               Cow position:
               
               

               Alignm length:
               785
               

               Alignm identity:
               565
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 309
               

               Conread position:
               22-798
               

               Cow position:
               
               

               Alignm length:
               783
               

               Alignm identity:
               570
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 209
               

               Conread position:
               22-801
               

               Cow position:
               
               

               Alignm length:
               782
               

               Alignm identity:
               578
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 110
               

               Conread position:
               23-421
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               266
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               156, 18
               

               Conread position:
               23-507
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 29
               

               Conread position:
               23-755
               

               Cow position:
               
               

               Alignm length:
               738
               

               Alignm identity:
               531
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 111
               

               Conread position:
               23-797
               

               Cow position:
               
               

               Alignm length:
               778
               

               Alignm identity:
               553
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 222
               

               Conread position:
               23-797
               

               Cow position:
               
               

               Alignm length:
               779
               

               Alignm identity:
               564
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 49
               

               Conread position:
               25-656
               

               Cow position:
               
               

               Alignm length:
               644
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 204
               

               Conread position:
               25-723
               

               Cow position:
               
               

               Alignm length:
               725
               

               Alignm identity:
               472
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 9
               

               Conread position:
               27-771
               

               Cow position:
               
               

               Alignm length:
               761
               

               Alignm identity:
               507
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 14
               

               Conread position:
               29-798
               

               Cow position:
               
               

               Alignm length:
               774
               

               Alignm identity:
               564
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 63
               

               Conread position:
               29-798
               

               Cow position:
               
               

               Alignm length:
               771
               

               Alignm identity:
               569
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               550, 70
               

               Conread position:
               30-268
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               164, 11
               

               Conread position:
               30-417
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 197
               

               Conread position:
               30-427
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               30-762
               

               Cow position:
               
               

               Alignm length:
               734
               

               Alignm identity:
               531
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               549, 11
               

               Conread position:
               30-800
               

               Cow position:
               
               

               Alignm length:
               775
               

               Alignm identity:
               589
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               549, 68
               

               Conread position:
               37-793
               

               Cow position:
               
               

               Alignm length:
               759
               

               Alignm identity:
               546
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               230, 46
               

               Conread position:
               37-797
               

               Cow position:
               
               

               Alignm length:
               767
               

               Alignm identity:
               557
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 438
               

               Conread position:
               37-803
               

               Cow position:
               
               

               Alignm length:
               770
               

               Alignm identity:
               545
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               353, 13
               

               Conread position:
               38-797
               

               Cow position:
               
               

               Alignm length:
               761
               

               Alignm identity:
               540
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               756, 291
               

               Conread position:
               38-797
               

               Cow position:
               
               

               Alignm length:
               770
               

               Alignm identity:
               536
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               412, 443
               

               Conread position:
               41-351
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               210
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               25, 11
               

               Conread position:
               41-797
               

               Cow position:
               
               

               Alignm length:
               759
               

               Alignm identity:
               548
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               532, 345
               

               Conread position:
               41-797
               

               Cow position:
               
               

               Alignm length:
               759
               

               Alignm identity:
               532
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 122
               

               Conread position:
               41-797
               

               Cow position:
               
               

               Alignm length:
               760
               

               Alignm identity:
               549
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               398, 288
               

               Conread position:
               41-798
               

               Cow position:
               
               

               Alignm length:
               760
               

               Alignm identity:
               541
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               492, 20
               

               Conread position:
               42-803
               

               Cow position:
               
               

               Alignm length:
               764
               

               Alignm identity:
               583
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 124
               

               Conread position:
               50-804
               

               Cow position:
               
               

               Alignm length:
               756
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               42, 59
               

               Conread position:
               52-679
               

               Cow position:
               
               

               Alignm length:
               633
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 84
               

               Conread position:
               52-698
               

               Cow position:
               
               

               Alignm length:
               653
               

               Alignm identity:
               406
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               158, 49
               

               Conread position:
               52-741
               

               Cow position:
               
               

               Alignm length:
               703
               

               Alignm identity:
               429
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               165, 8
               

               Conread position:
               58-553
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 18
               

               Conread position:
               58-797
               

               Cow position:
               
               

               Alignm length:
               744
               

               Alignm identity:
               542
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 417
               

               Conread position:
               58-801
               

               Cow position:
               
               

               Alignm length:
               751
               

               Alignm identity:
               494
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 24
               

               Conread position:
               58-801
               

               Cow position:
               
               

               Alignm length:
               755
               

               Alignm identity:
               487
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 25
               

               Conread position:
               58-801
               

               Cow position:
               
               

               Alignm length:
               746
               

               Alignm identity:
               478
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 51
               

               Conread position:
               67-313
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               175, 0
               

               Conread position:
               67-623
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 135
               

               Conread position:
               67-643
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               364
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               60, 25
               

               Conread position:
               67-779
               

               Cow position:
               
               

               Alignm length:
               725
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 79
               

               Conread position:
               67-795
               

               Cow position:
               
               

               Alignm length:
               756
               

               Alignm identity:
               464
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               346, 24
               

               Conread position:
               68-648
               

               Cow position:
               
               

               Alignm length:
               598
               

               Alignm identity:
               386
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               45, 35
               

               Conread position:
               68-756
               

               Cow position:
               
               

               Alignm length:
               702
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 104
               

               Conread position:
               72-797
               

               Cow position:
               
               

               Alignm length:
               729
               

               Alignm identity:
               541
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 62
               

               Conread position:
               72-798
               

               Cow position:
               
               

               Alignm length:
               731
               

               Alignm identity:
               531
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 185
               

               Conread position:
               72-798
               

               Cow position:
               
               

               Alignm length:
               731
               

               Alignm identity:
               542
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 15
               

               Conread position:
               75-323
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               140, 120
               

               Conread position:
               75-483
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               397, 0
               

               Conread position:
               75-801
               

               Cow position:
               
               

               Alignm length:
               728
               

               Alignm identity:
               514
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               504, 119
               

               Conread position:
               79-459
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               242
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               21, 124
               

               Conread position:
               82-775
               

               Cow position:
               
               

               Alignm length:
               695
               

               Alignm identity:
               507
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               495, 390
               

               Conread position:
               87-797
               

               Cow position:
               
               

               Alignm length:
               719
               

               Alignm identity:
               487
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               237, 14
               

               Conread position:
               92-603
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 176
               

               Conread position:
               95-506
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               278
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               53, 147
               

               Conread position:
               97-798
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               516
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 171
               

               Conread position:
               97-798
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 51
               

               Conread position:
               97-798
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               311, 147
               

               Conread position:
               98-418
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               242, 296
               

               Conread position:
               99-779
               

               Cow position:
               
               

               Alignm length:
               688
               

               Alignm identity:
               502
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 235
               

               Conread position:
               99-798
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 113
               

               Conread position:
               100-801
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               489
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 43
               

               Conread position:
               100-804
               

               Cow position:
               
               

               Alignm length:
               727
               

               Alignm identity:
               452
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               155, 273
               

               Conread position:
               101-389
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               27, 50
               

               Conread position:
               101-428
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               135, 106
               

               Conread position:
               102-798
               

               Cow position:
               
               

               Alignm length:
               702
               

               Alignm identity:
               533
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 23
               

               Conread position:
               102-798
               

               Cow position:
               
               

               Alignm length:
               702
               

               Alignm identity:
               530
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 233
               

               Conread position:
               104-702
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 123
               

               Conread position:
               105-764
               

               Cow position:
               
               

               Alignm length:
               663
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 45
               

               Conread position:
               105-801
               

               Cow position:
               
               

               Alignm length:
               722
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 126
               

               Conread position:
               108-782
               

               Cow position:
               
               

               Alignm length:
               688
               

               Alignm identity:
               429
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               18, 124
               

               Conread position:
               109-796
               

               Cow position:
               
               

               Alignm length:
               696
               

               Alignm identity:
               426
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               66, 52
               

               Conread position:
               110-506
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               261
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               110-799
               

               Cow position:
               
               

               Alignm length:
               699
               

               Alignm identity:
               426
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               89, 95
               

               Conread position:
               113-506
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               253
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               37, 33
               

               Conread position:
               122-495
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               123-671
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 84
               

               Conread position:
               136-584
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 5
               

               Conread position:
               136-798
               

               Cow position:
               
               

               Alignm length:
               665
               

               Alignm identity:
               486
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               441, 98
               

               Conread position:
               137-504
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               253
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               49, 184
               

               Conread position:
               142-798
               

               Cow position:
               
               

               Alignm length:
               674
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 12
               

               Conread position:
               149-413
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               190
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               152-769
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 53
               

               Conread position:
               185-798
               

               Cow position:
               
               

               Alignm length:
               615
               

               Alignm identity:
               463
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               394, 288
               

               Conread position:
               191-558
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               232
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               210, 148
               

               Conread position:
               191-779
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 66
               

               Conread position:
               191-799
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 5
               

               Conread position:
               205-625
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 270
               

               Conread position:
               215-729
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               314
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               178, 7
               

               Conread position:
               226-794
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               351, 246
               

               Conread position:
               226-797
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               351, 156
               

               Conread position:
               226-798
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               353, 247
               

               Conread position:
               227-800
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               348
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               117, 46
               

               Conread position:
               232-801
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 79
               

               Conread position:
               233-610
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               247
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               176, 40
               

               Conread position:
               245-801
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               335, 25
               

               Conread position:
               246-393
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               255-797
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 81
               

               Conread position:
               263-690
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 66
               

               Conread position:
               275-797
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               304, 54
               

               Conread position:
               295-498
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               164, 91
               

               Conread position:
               306-801
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 17
               

               Conread position:
               318-551
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               322-723
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               268
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               174, 152
               

               Conread position:
               325-798
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 148
               

               Conread position:
               334-801
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               245, 75
               

               Conread position:
               336-799
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               307
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               65, 71
               

               Conread position:
               349-696
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               230, 124
               

               Conread position:
               354-801
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               291
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               225, 125
               

               Conread position:
               360-804
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 15
               

               Conread position:
               365-789
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 33
               

               Conread position:
               367-801
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 105
               

               Conread position:
               374-788
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               273
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               205, 31
               

               Conread position:
               388-720
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 86
               

               Conread position:
               397-801
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 32
               

               Conread position:
               405-710
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 68
               

               Conread position:
               410-749
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 9
               

               Conread position:
               436-714
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               437-737
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               46, 34
               

               Conread position:
               458-801
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               236
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               23, 32
               

               Conread position:
               460-766
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 13
               

               Conread position:
               462-798
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 11
               

               Conread position:
               472-668
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               160
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 95
               

               Conread position:
               481-790
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               20, 85
               

               Conread position:
               483-671
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               96, 21
               

               Conread position:
               483-799
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               95, 9
               

               Conread position:
               492-666
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               88, 15
               

               Conread position:
               492-746
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               62, 38
               

               Conread position:
               494-800
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 33
               

               Conread position:
               504-801
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 24
               

               Conread position:
               505-803
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               512-771
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               66, 256
               

               Conread position:
               512-777
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 10
               

               Conread position:
               528-798
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               170
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               103, 20
               

               Conread position:
               530-801
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               549-801
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               29, 175
               

               Conread position:
               550-801
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               28, 60
               

               Conread position:
               560-768
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 79
               

               Conread position:
               564-758
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               159
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               578-797
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               584-801
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               202, 86
               

               Conread position:
               587-798
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               588-799
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               62, 185
               

               Conread position:
               595-784
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               157
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               599-798
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               163
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               600-797
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               164
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               609-798
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               153
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               623-798
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               144
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               628-796
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               99, 84
               

               Conread position:
               628-801
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               106, 90
               

               Conread position:
               644-801
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               645-793
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               658-804
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               671-798
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               673-798
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               673-804
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               116, 61
               

               Conread position:
               678-797
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               678-798
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               691-798
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               694-798
               

               Cow position:
               
               

               Alignm length:
               105
               

               Alignm identity:
               91
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               695-798
               

               Cow position:
               
               

               Alignm length:
               104
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.
Conread position:	1-801
Cow position:
Alignm length:	806
Alignm identity:	604
Alignm E-value:	0
Alignm gaps (pig, cow):	341, 89
Conread position:	1-803
Cow position:
Alignm length:	807
Alignm identity:	584
Alignm E-value:	0
Alignm gaps (pig, cow):	347, 174
Conread position:	2-334
Cow position:
Alignm length:	336
Alignm identity:	232
Alignm E-value:	4e-38
Alignm gaps (pig, cow):	197, 35
Conread position:	2-385
Cow position:
Alignm length:	384
Alignm identity:	274
Alignm E-value:	0
Alignm gaps (pig, cow):	40, 0
Conread position:	2-400
Cow position:
Alignm length:	399
Alignm identity:	281
Alignm E-value:	0
Alignm gaps (pig, cow):	59, 0
Conread position:	2-471
Cow position:
Alignm length:	472
Alignm identity:	332
Alignm E-value:	0
Alignm gaps (pig, cow):	426, 95
Conread position:	2-496
Cow position:
Alignm length:	503
Alignm identity:	353
Alignm E-value:	0
Alignm gaps (pig, cow):	434, 59
Conread position:	2-536
Cow position:
Alignm length:	537
Alignm identity:	360
Alignm E-value:	0
Alignm gaps (pig, cow):	27, 15
Conread position:	2-546
Cow position:
Alignm length:	547
Alignm identity:	380
Alignm E-value:	0
Alignm gaps (pig, cow):	130, 34
Conread position:	2-759
Cow position:
Alignm length:	760
Alignm identity:	556
Alignm E-value:	0
Alignm gaps (pig, cow):	211, 102
Conread position:	2-797
Cow position:
Alignm length:	798
Alignm identity:	591
Alignm E-value:	0
Alignm gaps (pig, cow):	30, 40
Conread position:	2-801
Cow position:
Alignm length:	802
Alignm identity:	579
Alignm E-value:	0
Alignm gaps (pig, cow):	266, 28
Conread position:	2-803
Cow position:
Alignm length:	811
Alignm identity:	593
Alignm E-value:	0
Alignm gaps (pig, cow):	34, 9
Conread position:	5-613
Cow position:
Alignm length:	612
Alignm identity:	434
Alignm E-value:	0
Alignm gaps (pig, cow):	334, 76
Conread position:	5-803
Cow position:
Alignm length:	802
Alignm identity:	583
Alignm E-value:	0
Alignm gaps (pig, cow):	572, 467
Conread position:	8-798
Cow position:
Alignm length:	794
Alignm identity:	574
Alignm E-value:	0
Alignm gaps (pig, cow):	15, 9
Conread position:	19-758
Cow position:
Alignm length:	743
Alignm identity:	524
Alignm E-value:	0
Alignm gaps (pig, cow):	371, 149
Conread position:	19-784
Cow position:
Alignm length:	771
Alignm identity:	576
Alignm E-value:	0
Alignm gaps (pig, cow):	11, 90
Conread position:	22-351
Cow position:
Alignm length:	333
Alignm identity:	214
Alignm E-value:	4e-28
Alignm gaps (pig, cow):	66, 226
Conread position:	22-370
Cow position:
Alignm length:	349
Alignm identity:	241
Alignm E-value:	0
Alignm gaps (pig, cow):	319, 0