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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8026N13.3
        

               
Conread position:
               
1-630
               

               
Cow position:
               
chr9:832060-831444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 25
               

               
Conread position:
               
1-749
               

               
Cow position:
               
chr9:1252610-1251867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
758
               

               
Alignm identity:
               
542
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 56
               

               
Conread position:
               
2-591
               

               
Cow position:
               
chr9:20310344-20309788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 59
               

               
Conread position:
               
2-739
               

               
Cow position:
               
chr9:223181-222449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
528
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 23
               

               
Conread position:
               
2-797
               

               
Cow position:
               
chr9:16175139-16175924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
798
               

               
Alignm identity:
               
579
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
577, 34
               

               
Conread position:
               
2-799
               

               
Cow position:
               
chr9:39992309-39993072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
805
               

               
Alignm identity:
               
542
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 14
               

               
Conread position:
               
5-784
               

               
Cow position:
               
chr9:47001578-47002332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
782
               

               
Alignm identity:
               
559
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
340, 101
               

               
Conread position:
               
5-797
               

               
Cow position:
               
chr9:31806905-31807690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
795
               

               
Alignm identity:
               
577
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
572, 318
               

               
Conread position:
               
5-798
               

               
Cow position:
               
chr9:1996547-1995757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
802
               

               
Alignm identity:
               
578
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
340, 58
               

               
Conread position:
               
5-798
               

               
Cow position:
               
chr9:30671736-30672525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
796
               

               
Alignm identity:
               
576
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
352, 94
               

               
Conread position:
               
5-801
               

               
Cow position:
               
chr9:5003378-5004161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
804
               

               
Alignm identity:
               
573
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 27
               

               
Conread position:
               
5-801
               

               
Cow position:
               
chr9:6756942-6757725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
806
               

               
Alignm identity:
               
548
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 32
               

               
Conread position:
               
12-612
               

               
Cow position:
               
chr9:7001928-7002524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
565, 14
               

               
Conread position:
               
12-777
               

               
Cow position:
               
chr9:27034084-27034836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
767
               

               
Alignm identity:
               
561
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
567, 14
               

               
Conread position:
               
19-411
               

               
Cow position:
               
chr9:18510346-18509953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
19-709
               

               
Cow position:
               
chr9:29028849-29028158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
694
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
558, 14
               

               
Conread position:
               
20-554
               

               
Cow position:
               
chr9:54359999-54360514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 10
               

               
Conread position:
               
21-793
               

               
Cow position:
               
chr9:37971826-37971058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
774
               

               
Alignm identity:
               
564
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
556, 451
               

               
Conread position:
               
21-797
               

               
Cow position:
               
chr9:2170439-2171214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
781
               

               
Alignm identity:
               
561
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
474, 256
               

               
Conread position:
               
22-368
               

               
Cow position:
               
chr9:3006890-3006547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
77, 83
               

               
Conread position:
               
22-378
               

               
Cow position:
               
chr9:33834889-33834535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 69
               

               
Conread position:
               
22-379
               

               
Cow position:
               
chr9:50788952-50789305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 190
               

               
Conread position:
               
22-699
               

               
Cow position:
               
chr9:46626415-46625741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
679
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
555, 77
               

               
Conread position:
               
22-734
               

               
Cow position:
               
chr9:4671991-4672700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
519
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
555, 69
               

               
Conread position:
               
22-798
               

               
Cow position:
               
chr9:781417-780647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
779
               

               
Alignm identity:
               
564
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
493, 69
               

               
Conread position:
               
22-798
               

               
Cow position:
               
chr9:1076815-1076040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
779
               

               
Alignm identity:
               
572
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
555, 212
               

               
Conread position:
               
22-798
               

               
Cow position:
               
chr9:17065004-17064226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
792
               

               
Alignm identity:
               
558
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
557, 98
               

               
Conread position:
               
22-798
               

               
Cow position:
               
chr9:25483254-25484030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
779
               

               
Alignm identity:
               
571
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 451
               

               
Conread position:
               
22-798
               

               
Cow position:
               
chr9:25755824-25755066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
781
               

               
Alignm identity:
               
560
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 315
               

               
Conread position:
               
22-798
               

               
Cow position:
               
chr9:27933476-27934246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
779
               

               
Alignm identity:
               
568
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 183
               

               
Conread position:
               
22-798
               

               
Cow position:
               
chr9:31194785-31194009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
779
               

               
Alignm identity:
               
571
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
474, 450
               

               
Conread position:
               
22-798
               

               
Cow position:
               
chr9:34243216-34242440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
781
               

               
Alignm identity:
               
578
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 205
               

               
Conread position:
               
22-798
               

               
Cow position:
               
chr9:45872734-45873506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
781
               

               
Alignm identity:
               
567
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 130
               

               
Conread position:
               
22-799
               

               
Cow position:
               
chr9:2500916-2500136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
784
               

               
Alignm identity:
               
566
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 240
               

               
Conread position:
               
22-801
               

               
Cow position:
               
chr9:64118245-64118978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
786
               

               
Alignm identity:
               
550
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 33
               

               
Conread position:
               
23-292
               

               
Cow position:
               
chr9:10855582-10855852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
75, 95
               

               
Conread position:
               
23-355
               

               
Cow position:
               
chr9:12401630-12401959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
23-508
               

               
Cow position:
               
chr9:51183325-51182835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 188
               

               
Conread position:
               
23-618
               

               
Cow position:
               
chr9:6831160-6830580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 34
               

               
Conread position:
               
23-764
               

               
Cow position:
               
chr9:37163424-37162683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
744
               

               
Alignm identity:
               
538
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
535, 109
               

               
Conread position:
               
23-797
               

               
Cow position:
               
chr9:29629364-29628590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
777
               

               
Alignm identity:
               
561
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
556, 450
               

               
Conread position:
               
23-801
               

               
Cow position:
               
chr9:6051654-6050886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
784
               

               
Alignm identity:
               
560
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 152
               

               
Conread position:
               
23-801
               

               
Cow position:
               
chr9:9012491-9013268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
786
               

               
Alignm identity:
               
562
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 360
               

               
Conread position:
               
27-467
               

               
Cow position:
               
chr9:2488576-2488145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 0
               

               
Conread position:
               
29-797
               

               
Cow position:
               
chr9:16267750-16268528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
781
               

               
Alignm identity:
               
578
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 133
               

               
Conread position:
               
30-501
               

               
Cow position:
               
chr9:418136-417670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
426, 11
               

               
Conread position:
               
30-798
               

               
Cow position:
               
chr9:164100-163346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
772
               

               
Alignm identity:
               
563
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 206
               

               
Conread position:
               
33-798
               

               
Cow position:
               
chr9:2185350-2186123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
786
               

               
Alignm identity:
               
552
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 73
               

               
Conread position:
               
38-797
               

               
Cow position:
               
chr9:59174759-59174003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
765
               

               
Alignm identity:
               
565
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 112
               

               
Conread position:
               
38-798
               

               
Cow position:
               
chr9:42309080-42309840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
764
               

               
Alignm identity:
               
573
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 167
               

               
Conread position:
               
41-671
               

               
Cow position:
               
chr9:2199516-2200137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
536, 30
               

               
Conread position:
               
41-744
               

               
Cow position:
               
chr9:28020948-28021654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
507
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 240
               

               
Conread position:
               
41-783
               

               
Cow position:
               
chr9:3548769-3548030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
746
               

               
Alignm identity:
               
554
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 140
               

               
Conread position:
               
41-797
               

               
Cow position:
               
chr9:42568274-42569028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
759
               

               
Alignm identity:
               
559
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
533, 288
               

               
Conread position:
               
41-797
               

               
Cow position:
               
chr9:59535506-59536252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
760
               

               
Alignm identity:
               
547
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
538, 58
               

               
Conread position:
               
42-790
               

               
Cow position:
               
chr9:59456197-59455449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
751
               

               
Alignm identity:
               
548
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
535, 431
               

               
Conread position:
               
44-797
               

               
Cow position:
               
chr9:59483260-59482515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
757
               

               
Alignm identity:
               
550
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
535, 96
               

               
Conread position:
               
55-798
               

               
Cow position:
               
chr9:28626611-28625884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
746
               

               
Alignm identity:
               
542
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
484, 10
               

               
Conread position:
               
56-797
               

               
Cow position:
               
chr9:10321237-10321965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
746
               

               
Alignm identity:
               
543
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 286
               

               
Conread position:
               
58-605
               

               
Cow position:
               
chr9:52290055-52290599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
39, 24
               

               
Conread position:
               
61-509
               

               
Cow position:
               
chr9:59510021-59510479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 155
               

               
Conread position:
               
67-549
               

               
Cow position:
               
chr9:9577033-9577510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
28, 64
               

               
Conread position:
               
67-694
               

               
Cow position:
               
chr9:3868072-3867462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 65
               

               
Conread position:
               
67-751
               

               
Cow position:
               
chr9:2051887-2052558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
698
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 151
               

               
Conread position:
               
67-771
               

               
Cow position:
               
chr9:52570106-52570780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
707
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 14
               

               
Conread position:
               
67-780
               

               
Cow position:
               
chr9:4984209-4984911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
522
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 24
               

               
Conread position:
               
68-801
               

               
Cow position:
               
chr9:3938359-3937665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
737
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 55
               

               
Conread position:
               
69-248
               

               
Cow position:
               
chr9:14961999-14961820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
142, 23
               

               
Conread position:
               
69-649
               

               
Cow position:
               
chr9:21009984-21009407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
15, 117
               

               
Conread position:
               
72-264
               

               
Cow position:
               
chr9:8969614-8969419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
72-337
               

               
Cow position:
               
chr9:651662-651390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
32, 66
               

               
Conread position:
               
72-513
               

               
Cow position:
               
chr9:1294385-1293944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 33
               

               
Conread position:
               
75-393
               

               
Cow position:
               
chr9:60652026-60651711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
61, 29
               

               
Conread position:
               
78-797
               

               
Cow position:
               
chr9:4531932-4532648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
524
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 96
               

               
Conread position:
               
78-803
               

               
Cow position:
               
chr9:60278585-60277858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
548
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 133
               

               
Conread position:
               
85-400
               

               
Cow position:
               
chr9:31776391-31776707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
10, 152
               

               
Conread position:
               
93-798
               

               
Cow position:
               
chr9:31020259-31020979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
725
               

               
Alignm identity:
               
529
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 315
               

               
Conread position:
               
94-496
               

               
Cow position:
               
chr9:830098-829705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 82
               

               
Conread position:
               
97-357
               

               
Cow position:
               
chr9:3585760-3586019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
99-803
               

               
Cow position:
               
chr9:3155502-3156185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
707
               

               
Alignm identity:
               
518
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 152
               

               
Conread position:
               
100-508
               

               
Cow position:
               
chr9:22702393-22701985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
114, 123
               

               
Conread position:
               
100-783
               

               
Cow position:
               
chr9:3567400-3566709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
694
               

               
Alignm identity:
               
506
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 378
               

               
Conread position:
               
102-798
               

               
Cow position:
               
chr9:37130080-37129388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
539
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 148
               

               
Conread position:
               
105-798
               

               
Cow position:
               
chr9:36723968-36724659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
697
               

               
Alignm identity:
               
531
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 106
               

               
Conread position:
               
110-777
               

               
Cow position:
               
chr9:793034-792377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
670
               

               
Alignm identity:
               
488
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
467, 62
               

               
Conread position:
               
110-789
               

               
Cow position:
               
chr9:9331247-9330580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
688
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
101, 55
               

               
Conread position:
               
110-798
               

               
Cow position:
               
chr9:28677445-28678130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
691
               

               
Alignm identity:
               
514
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 135
               

               
Conread position:
               
110-798
               

               
Cow position:
               
chr9:59443325-59444007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
694
               

               
Alignm identity:
               
512
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 148
               

               
Conread position:
               
110-800
               

               
Cow position:
               
chr9:12846053-12845392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
483
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 49
               

               
Conread position:
               
113-461
               

               
Cow position:
               
chr9:18836260-18836599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
15, 7
               

               
Conread position:
               
114-646
               

               
Cow position:
               
chr9:23409699-23410210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
100, 61
               

               
Conread position:
               
116-749
               

               
Cow position:
               
chr9:55616829-55617438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 103
               

               
Conread position:
               
116-801
               

               
Cow position:
               
chr9:26002640-26001993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
692
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
13, 84
               

               
Conread position:
               
118-798
               

               
Cow position:
               
chr9:131724-131032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
701
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 14
               

               
Conread position:
               
118-798
               

               
Cow position:
               
chr9:10314859-10315524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
687
               

               
Alignm identity:
               
515
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 50
               

               
Conread position:
               
118-801
               

               
Cow position:
               
chr9:35657450-35658105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
686
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 9
               

               
Conread position:
               
119-554
               

               
Cow position:
               
chr9:22650633-22651057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 205
               

               
Conread position:
               
119-797
               

               
Cow position:
               
chr9:7062627-7061935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
694
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 367
               

               
Conread position:
               
119-801
               

               
Cow position:
               
chr9:15071994-15072674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
685
               

               
Alignm identity:
               
525
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 354
               

               
Conread position:
               
123-555
               

               
Cow position:
               
chr9:26712834-26712414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
118, 128
               

               
Conread position:
               
124-455
               

               
Cow position:
               
chr9:34107235-34106905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
91, 99
               

               
Conread position:
               
133-801
               

               
Cow position:
               
chr9:2801023-2800396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
673
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
136, 11
               

               
Conread position:
               
139-524
               

               
Cow position:
               
chr9:1979446-1979821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
149-496
               

               
Cow position:
               
chr9:32968249-32968596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 200
               

               
Conread position:
               
164-485
               

               
Cow position:
               
chr9:2065685-2065368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
78, 92
               

               
Conread position:
               
168-801
               

               
Cow position:
               
chr9:3024641-3025264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 74
               

               
Conread position:
               
171-801
               

               
Cow position:
               
chr9:64158660-64159278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 40
               

               
Conread position:
               
191-571
               

               
Cow position:
               
chr9:13219872-13220247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 5
               

               
Conread position:
               
191-801
               

               
Cow position:
               
chr9:3725830-3726441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 29
               

               
Conread position:
               
209-705
               

               
Cow position:
               
chr9:2202781-2203270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 41
               

               
Conread position:
               
220-531
               

               
Cow position:
               
chr9:2697355-2697042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
41, 256
               

               
Conread position:
               
222-623
               

               
Cow position:
               
chr9:870449-870064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
78, 31
               

               
Conread position:
               
231-728
               

               
Cow position:
               
chr9:43215410-43214914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
309, 154
               

               
Conread position:
               
234-797
               

               
Cow position:
               
chr9:5424585-5424028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 59
               

               
Conread position:
               
266-595
               

               
Cow position:
               
chr9:8969297-8968968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 61
               

               
Conread position:
               
266-798
               

               
Cow position:
               
chr9:25023675-25023144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
313, 51
               

               
Conread position:
               
267-801
               

               
Cow position:
               
chr9:3356345-3355832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 39
               

               
Conread position:
               
277-798
               

               
Cow position:
               
chr9:9055429-9054908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
302, 196
               

               
Conread position:
               
295-797
               

               
Cow position:
               
chr9:6111319-6110842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 42
               

               
Conread position:
               
310-783
               

               
Cow position:
               
chr9:3542480-3542950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 163
               

               
Conread position:
               
318-803
               

               
Cow position:
               
chr9:20024996-20025475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
95, 13
               

               
Conread position:
               
332-801
               

               
Cow position:
               
chr9:29328004-29328443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
96, 23
               

               
Conread position:
               
336-677
               

               
Cow position:
               
chr9:59425381-59425712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
168, 92
               

               
Conread position:
               
336-798
               

               
Cow position:
               
chr9:37064100-37063646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 138
               

               
Conread position:
               
347-798
               

               
Cow position:
               
chr9:30826388-30826839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 126
               

               
Conread position:
               
348-801
               

               
Cow position:
               
chr9:3006537-3006085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 19
               

               
Conread position:
               
360-798
               

               
Cow position:
               
chr9:3586075-3586525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 362
               

               
Conread position:
               
367-801
               

               
Cow position:
               
chr9:34992110-34992553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 61
               

               
Conread position:
               
373-758
               

               
Cow position:
               
chr9:4280195-4280573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 85
               

               
Conread position:
               
381-797
               

               
Cow position:
               
chr9:50789418-50789834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 92
               

               
Conread position:
               
394-801
               

               
Cow position:
               
chr9:37094930-37095355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
88, 80
               

               
Conread position:
               
395-801
               

               
Cow position:
               
chr9:13477456-13477062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 81
               

               
Conread position:
               
413-801
               

               
Cow position:
               
chr9:3578698-3578341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
161, 60
               

               
Conread position:
               
438-737
               

               
Cow position:
               
chr9:2001605-2001312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 35
               

               
Conread position:
               
454-801
               

               
Cow position:
               
chr9:18836823-18837171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 19
               

               
Conread position:
               
464-754
               

               
Cow position:
               
chr9:7013864-7014164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
114, 10
               

               
Conread position:
               
464-786
               

               
Cow position:
               
chr9:35317754-35317432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
113, 9
               

               
Conread position:
               
465-804
               

               
Cow position:
               
chr9:6973951-6974292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 14
               

               
Conread position:
               
469-801
               

               
Cow position:
               
chr9:51182368-51182034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
472-801
               

               
Cow position:
               
chr9:59510622-59510951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
5, 16
               

               
Conread position:
               
483-648
               

               
Cow position:
               
chr9:2064834-2064669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
97, 40
               

               
Conread position:
               
483-777
               

               
Cow position:
               
chr9:7012176-7012456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
489-797
               

               
Cow position:
               
chr9:32968815-32969124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 229
               

               
Conread position:
               
492-630
               

               
Cow position:
               
chr9:829372-829233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
497-804
               

               
Cow position:
               
chr9:1979832-1980142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
504-733
               

               
Cow position:
               
chr9:22410250-22410023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
76, 32
               

               
Conread position:
               
512-783
               

               
Cow position:
               
chr9:43662830-43663087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
67, 148
               

               
Conread position:
               
512-801
               

               
Cow position:
               
chr9:1635422-1635701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
27, 103
               

               
Conread position:
               
519-798
               

               
Cow position:
               
chr9:3394107-3393832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
60, 175
               

               
Conread position:
               
530-720
               

               
Cow position:
               
chr9:34719858-34720052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
532-798
               

               
Cow position:
               
chr9:40191785-40191519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 8
               

               
Conread position:
               
542-803
               

               
Cow position:
               
chr9:26710581-26710330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 62
               

               
Conread position:
               
546-791
               

               
Cow position:
               
chr9:2475193-2475434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
33, 94
               

               
Conread position:
               
550-759
               

               
Cow position:
               
chr9:18067311-18067101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
550-798
               

               
Cow position:
               
chr9:54361344-54361588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 130
               

               
Conread position:
               
555-801
               

               
Cow position:
               
chr9:64018545-64018299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 10
               

               
Conread position:
               
560-804
               

               
Cow position:
               
chr9:15683855-15684092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
19, 10
               

               
Conread position:
               
580-801
               

               
Cow position:
               
chr9:39040514-39040726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
37, 17
               

               
Conread position:
               
596-790
               

               
Cow position:
               
chr9:22653521-22653715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
596-801
               

               
Cow position:
               
chr9:44817814-44818019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
599-798
               

               
Cow position:
               
chr9:49177869-49177670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
604-801
               

               
Cow position:
               
chr9:20309568-20309371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
614-797
               

               
Cow position:
               
chr9:6830527-6830352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
180, 118
               

               
Conread position:
               
616-798
               

               
Cow position:
               
chr9:31064408-31064590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
622-798
               

               
Cow position:
               
chr9:8968968-8968800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
625-798
               

               
Cow position:
               
chr9:2488147-2487973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
629-801
               

               
Cow position:
               
chr9:21381919-21381751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
24, 78
               

               
Conread position:
               
638-801
               

               
Cow position:
               
chr9:18509806-18509643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
639-783
               

               
Cow position:
               
chr9:7002519-7002664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
641-798
               

               
Cow position:
               
chr9:60651712-60651555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
666-800
               

               
Cow position:
               
chr9:3803067-3803201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.