• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8026P06.3
        

               
Conread position:
               
724-1125
               

               
Cow position:
               
chr12:20777160-20776765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
12, 51
               

               
Conread position:
               
729-1152
               

               
Cow position:
               
chr12:9767109-9766689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 52
               

               
Conread position:
               
773-1132
               

               
Cow position:
               
chr12:8943404-8943040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
5, 39
               

               
Conread position:
               
797-1124
               

               
Cow position:
               
chr12:43788875-43789189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
97, 9
               

               
Conread position:
               
797-1132
               

               
Cow position:
               
chr12:26217990-26217656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
20, 10
               

               
Conread position:
               
797-1146
               

               
Cow position:
               
chr12:22485653-22485999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
19, 55
               

               
Conread position:
               
799-1133
               

               
Cow position:
               
chr12:12637344-12637010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
83, 12
               

               
Conread position:
               
799-1143
               

               
Cow position:
               
chr12:43560315-43559954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
18, 220
               

               
Conread position:
               
800-1125
               

               
Cow position:
               
chr12:7110040-7110372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
135, 17
               

               
Conread position:
               
810-1125
               

               
Cow position:
               
chr12:18518516-18518836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 33
               

               
Conread position:
               
810-1152
               

               
Cow position:
               
chr12:11836081-11836419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
7, 33
               

               
Conread position:
               
811-1125
               

               
Cow position:
               
chr12:19258129-19258440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
70, 86
               

               
Conread position:
               
811-1141
               

               
Cow position:
               
chr12:6241162-6241507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
813-1106
               

               
Cow position:
               
chr12:15122172-15122470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
25, 106
               

               
Conread position:
               
814-1125
               

               
Cow position:
               
chr12:37008852-37008546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
19, 80
               

               
Conread position:
               
815-1132
               

               
Cow position:
               
chr12:42685093-42684769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
86, 301
               

               
Conread position:
               
816-988
               

               
Cow position:
               
chr12:28582649-28582476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
129, 82
               

               
Conread position:
               
816-991
               

               
Cow position:
               
chr12:28471493-28471682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
816-1004
               

               
Cow position:
               
chr12:8869022-8868834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
65, 128
               

               
Conread position:
               
816-1026
               

               
Cow position:
               
chr12:30170523-30170738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
125, 203
               

               
Conread position:
               
816-1031
               

               
Cow position:
               
chr12:19691379-19691159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
816-1031
               

               
Cow position:
               
chr12:39465437-39465654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
72, 36
               

               
Conread position:
               
816-1031
               

               
Cow position:
               
chr12:41216029-41215810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
816-1041
               

               
Cow position:
               
chr12:24116509-24116279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
12, 101
               

               
Conread position:
               
816-1041
               

               
Cow position:
               
chr12:25177728-25177515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
816-1051
               

               
Cow position:
               
chr12:7882148-7882390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
95, 67
               

               
Conread position:
               
816-1053
               

               
Cow position:
               
chr12:29770718-29770484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
816-1053
               

               
Cow position:
               
chr12:32714899-32715143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
85, 154
               

               
Conread position:
               
816-1054
               

               
Cow position:
               
chr12:15530913-15531153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
125, 82
               

               
Conread position:
               
816-1055
               

               
Cow position:
               
chr12:7000749-7000506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
103, 169
               

               
Conread position:
               
816-1055
               

               
Cow position:
               
chr12:34148494-34148263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
209, 52
               

               
Conread position:
               
816-1057
               

               
Cow position:
               
chr12:6485352-6485113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
77, 26
               

               
Conread position:
               
816-1076
               

               
Cow position:
               
chr12:25320777-25321037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
127, 83
               

               
Conread position:
               
816-1086
               

               
Cow position:
               
chr12:30662092-30661824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
100, 62
               

               
Conread position:
               
816-1086
               

               
Cow position:
               
chr12:33323640-33323369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
127, 73
               

               
Conread position:
               
816-1086
               

               
Cow position:
               
chr12:42254522-42254794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
104, 212
               

               
Conread position:
               
816-1092
               

               
Cow position:
               
chr12:20636301-20636019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
63, 200
               

               
Conread position:
               
816-1095
               

               
Cow position:
               
chr12:41091391-41091669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
60, 39
               

               
Conread position:
               
816-1099
               

               
Cow position:
               
chr12:9710353-9710067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
103, 6
               

               
Conread position:
               
816-1099
               

               
Cow position:
               
chr12:28748795-28749082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
66, 135
               

               
Conread position:
               
816-1104
               

               
Cow position:
               
chr12:24662971-24663263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
123, 61
               

               
Conread position:
               
816-1107
               

               
Cow position:
               
chr12:42966853-42967141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
34, 80
               

               
Conread position:
               
816-1108
               

               
Cow position:
               
chr12:5459121-5459399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
116, 36
               

               
Conread position:
               
816-1118
               

               
Cow position:
               
chr12:32169396-32169703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
83, 46
               

               
Conread position:
               
816-1118
               

               
Cow position:
               
chr12:46120975-46120661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
120, 71
               

               
Conread position:
               
816-1119
               

               
Cow position:
               
chr12:33851214-33851514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
73, 30
               

               
Conread position:
               
816-1119
               

               
Cow position:
               
chr12:35669618-35669314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
76, 232
               

               
Conread position:
               
816-1119
               

               
Cow position:
               
chr12:42879550-42879857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
79, 42
               

               
Conread position:
               
816-1120
               

               
Cow position:
               
chr12:26575740-26576051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
12, 229
               

               
Conread position:
               
816-1122
               

               
Cow position:
               
chr12:6410877-6410575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
110, 36
               

               
Conread position:
               
816-1123
               

               
Cow position:
               
chr12:17080115-17080428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
88, 46
               

               
Conread position:
               
816-1123
               

               
Cow position:
               
chr12:17881717-17882017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
16, 58
               

               
Conread position:
               
816-1123
               

               
Cow position:
               
chr12:41658868-41658559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
63, 112
               

               
Conread position:
               
816-1124
               

               
Cow position:
               
chr12:4596320-4596636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
71, 114
               

               
Conread position:
               
816-1124
               

               
Cow position:
               
chr12:5714483-5714781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
65, 170
               

               
Conread position:
               
816-1124
               

               
Cow position:
               
chr12:35771164-35770861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
105, 71
               

               
Conread position:
               
816-1125
               

               
Cow position:
               
chr12:12300776-12301091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
72, 92
               

               
Conread position:
               
816-1125
               

               
Cow position:
               
chr12:30745571-30745880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 27
               

               
Conread position:
               
816-1126
               

               
Cow position:
               
chr12:13988226-13988538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
105, 78
               

               
Conread position:
               
816-1126
               

               
Cow position:
               
chr12:15429740-15429432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
109, 36
               

               
Conread position:
               
816-1130
               

               
Cow position:
               
chr12:4866677-4866984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
111, 80
               

               
Conread position:
               
816-1133
               

               
Cow position:
               
chr12:17879448-17879134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
43, 26
               

               
Conread position:
               
816-1133
               

               
Cow position:
               
chr12:18020712-18021052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
82, 56
               

               
Conread position:
               
816-1133
               

               
Cow position:
               
chr12:20479468-20479172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
129, 40
               

               
Conread position:
               
816-1133
               

               
Cow position:
               
chr12:23446577-23446889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
71, 57
               

               
Conread position:
               
816-1133
               

               
Cow position:
               
chr12:44622209-44622532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
74, 84
               

               
Conread position:
               
816-1134
               

               
Cow position:
               
chr12:10895693-10895381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
85, 15
               

               
Conread position:
               
816-1138
               

               
Cow position:
               
chr12:42282978-42282663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
109, 73
               

               
Conread position:
               
816-1139
               

               
Cow position:
               
chr12:23916698-23917019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
65, 129
               

               
Conread position:
               
816-1139
               

               
Cow position:
               
chr12:25561227-25561544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 10
               

               
Conread position:
               
816-1140
               

               
Cow position:
               
chr12:15089369-15089694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 35
               

               
Conread position:
               
816-1141
               

               
Cow position:
               
chr12:4719801-4720126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
71, 51
               

               
Conread position:
               
816-1142
               

               
Cow position:
               
chr12:31947973-31948289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
108, 65
               

               
Conread position:
               
816-1143
               

               
Cow position:
               
chr12:35310819-35310495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
130, 40
               

               
Conread position:
               
816-1143
               

               
Cow position:
               
chr12:37701378-37701714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
68, 197
               

               
Conread position:
               
816-1145
               

               
Cow position:
               
chr12:15783778-15784106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
75, 127
               

               
Conread position:
               
816-1145
               

               
Cow position:
               
chr12:16605797-16605485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
187, 32
               

               
Conread position:
               
816-1147
               

               
Cow position:
               
chr12:15938411-15938085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 168
               

               
Conread position:
               
816-1148
               

               
Cow position:
               
chr12:30919272-30919628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
53, 278
               

               
Conread position:
               
816-1148
               

               
Cow position:
               
chr12:42784162-42784494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
68, 219
               

               
Conread position:
               
816-1149
               

               
Cow position:
               
chr12:6242320-6241990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
111, 126
               

               
Conread position:
               
816-1149
               

               
Cow position:
               
chr12:42181283-42180940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
67, 225
               

               
Conread position:
               
816-1150
               

               
Cow position:
               
chr12:22285264-22284935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
126, 81
               

               
Conread position:
               
816-1150
               

               
Cow position:
               
chr12:38774384-38774058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
75, 113
               

               
Conread position:
               
816-1151
               

               
Cow position:
               
chr12:30804118-30803786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
91, 36
               

               
Conread position:
               
816-1152
               

               
Cow position:
               
chr12:12165517-12165844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
86, 101
               

               
Conread position:
               
816-1152
               

               
Cow position:
               
chr12:40910434-40910094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
123, 57
               

               
Conread position:
               
817-988
               

               
Cow position:
               
chr12:24211266-24211439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
817-1023
               

               
Cow position:
               
chr12:31429714-31429504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
817-1031
               

               
Cow position:
               
chr12:47804010-47804231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
73, 170
               

               
Conread position:
               
817-1037
               

               
Cow position:
               
chr12:30210338-30210564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
69, 55
               

               
Conread position:
               
817-1050
               

               
Cow position:
               
chr12:18766122-18765879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
817-1084
               

               
Cow position:
               
chr12:4008421-4008157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
122, 53
               

               
Conread position:
               
817-1096
               

               
Cow position:
               
chr12:37770732-37771001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
79, 53
               

               
Conread position:
               
817-1107
               

               
Cow position:
               
chr12:37993866-37993576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
124, 11
               

               
Conread position:
               
817-1123
               

               
Cow position:
               
chr12:9482445-9482140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
72, 30
               

               
Conread position:
               
817-1124
               

               
Cow position:
               
chr12:30805710-30806016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
124, 79
               

               
Conread position:
               
817-1129
               

               
Cow position:
               
chr12:15050761-15050460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
65, 82
               

               
Conread position:
               
817-1133
               

               
Cow position:
               
chr12:18421067-18420748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
68, 40
               

               
Conread position:
               
817-1133
               

               
Cow position:
               
chr12:41159451-41159755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
103, 20
               

               
Conread position:
               
817-1139
               

               
Cow position:
               
chr12:7902944-7902626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
126, 13
               

               
Conread position:
               
817-1144
               

               
Cow position:
               
chr12:24032357-24032668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
128, 39
               

               
Conread position:
               
817-1146
               

               
Cow position:
               
chr12:42160690-42160373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
817-1152
               

               
Cow position:
               
chr12:7299605-7299279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
98, 77
               

               
Conread position:
               
818-940
               

               
Cow position:
               
chr12:26317319-26317443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
818-1004
               

               
Cow position:
               
chr12:34673484-34673292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
74, 56
               

               
Conread position:
               
818-1030
               

               
Cow position:
               
chr12:5905911-5906130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
818-1055
               

               
Cow position:
               
chr12:19507488-19507736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
74, 240
               

               
Conread position:
               
818-1123
               

               
Cow position:
               
chr12:11587630-11587931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
38, 45
               

               
Conread position:
               
818-1124
               

               
Cow position:
               
chr12:33976057-33976366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
108, 84
               

               
Conread position:
               
818-1125
               

               
Cow position:
               
chr12:37170086-37169785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 53
               

               
Conread position:
               
818-1127
               

               
Cow position:
               
chr12:4768784-4769085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
33, 65
               

               
Conread position:
               
818-1127
               

               
Cow position:
               
chr12:36544793-36544478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
64, 202
               

               
Conread position:
               
819-1055
               

               
Cow position:
               
chr12:6720181-6720424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
62, 210
               

               
Conread position:
               
819-1133
               

               
Cow position:
               
chr12:15103123-15103449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
73, 200
               

               
Conread position:
               
819-1133
               

               
Cow position:
               
chr12:29899571-29899248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
92, 59
               

               
Conread position:
               
819-1135
               

               
Cow position:
               
chr12:17031473-17031782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
120, 165
               

               
Conread position:
               
819-1146
               

               
Cow position:
               
chr12:29675279-29674952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
117, 27
               

               
Conread position:
               
819-1148
               

               
Cow position:
               
chr12:31530147-31530486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
96, 149
               

               
Conread position:
               
819-1151
               

               
Cow position:
               
chr12:8075830-8075488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
79, 48
               

               
Conread position:
               
820-1119
               

               
Cow position:
               
chr12:5635588-5635294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
86, 52
               

               
Conread position:
               
820-1138
               

               
Cow position:
               
chr12:28131444-28131765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
64, 32
               

               
Conread position:
               
820-1139
               

               
Cow position:
               
chr12:16670124-16670444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 193
               

               
Conread position:
               
821-1147
               

               
Cow position:
               
chr12:17269659-17269988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 220
               

               
Conread position:
               
822-1108
               

               
Cow position:
               
chr12:25809287-25809581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
72, 47
               

               
Conread position:
               
822-1150
               

               
Cow position:
               
chr12:30590628-30590958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
84, 216
               

               
Conread position:
               
826-1151
               

               
Cow position:
               
chr12:38852165-38851831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
86, 41
               

               
Conread position:
               
826-1151
               

               
Cow position:
               
chr12:44602369-44602697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
58, 186
               

               
Conread position:
               
827-1054
               

               
Cow position:
               
chr12:2813093-2813324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
74, 29
               

               
Conread position:
               
829-1123
               

               
Cow position:
               
chr12:4341871-4341573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
106, 14
               

               
Conread position:
               
830-999
               

               
Cow position:
               
chr12:18023564-18023382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
60, 13
               

               
Conread position:
               
830-1141
               

               
Cow position:
               
chr12:10942154-10942475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
56, 70
               

               
Conread position:
               
834-1009
               

               
Cow position:
               
chr12:3092700-3092527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
51, 73
               

               
Conread position:
               
834-1055
               

               
Cow position:
               
chr12:45820495-45820267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
71, 201
               

               
Conread position:
               
834-1144
               

               
Cow position:
               
chr12:7884809-7884496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 74
               

               
Conread position:
               
835-1041
               

               
Cow position:
               
chr12:30605291-30605081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
60, 78
               

               
Conread position:
               
837-1124
               

               
Cow position:
               
chr12:11056750-11057029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
105, 189
               

               
Conread position:
               
837-1124
               

               
Cow position:
               
chr12:14222852-14223146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
48, 100
               

               
Conread position:
               
837-1134
               

               
Cow position:
               
chr12:19261074-19261365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
58, 28
               

               
Conread position:
               
838-1146
               

               
Cow position:
               
chr12:21780041-21780352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
97, 55
               

               
Conread position:
               
839-1104
               

               
Cow position:
               
chr12:25917391-25917134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
106, 40
               

               
Conread position:
               
839-1113
               

               
Cow position:
               
chr12:5632004-5631731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
55, 182
               

               
Conread position:
               
839-1125
               

               
Cow position:
               
chr12:39486305-39486593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
102, 19
               

               
Conread position:
               
839-1147
               

               
Cow position:
               
chr12:42602364-42602051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
76, 53
               

               
Conread position:
               
839-1149
               

               
Cow position:
               
chr12:38126649-38126336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
43, 196
               

               
Conread position:
               
840-1025
               

               
Cow position:
               
chr12:6489111-6488924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
840-1026
               

               
Cow position:
               
chr12:18577719-18577910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
93, 9
               

               
Conread position:
               
840-1055
               

               
Cow position:
               
chr12:31959766-31959976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
840-1086
               

               
Cow position:
               
chr12:43942350-43942597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
53, 85
               

               
Conread position:
               
840-1125
               

               
Cow position:
               
chr12:15703624-15703330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
51, 129
               

               
Conread position:
               
840-1125
               

               
Cow position:
               
chr12:44203110-44202829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
27, 143
               

               
Conread position:
               
840-1142
               

               
Cow position:
               
chr12:33129141-33129436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
43, 74
               

               
Conread position:
               
840-1147
               

               
Cow position:
               
chr12:18123559-18123853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
101, 49
               

               
Conread position:
               
842-1063
               

               
Cow position:
               
chr12:27037570-27037343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
842-1114
               

               
Cow position:
               
chr12:48415634-48415367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
846-1130
               

               
Cow position:
               
chr12:19502539-19502245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
99, 40
               

               
Conread position:
               
850-1125
               

               
Cow position:
               
chr12:29358168-29357904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
38, 69
               

               
Conread position:
               
850-1133
               

               
Cow position:
               
chr12:18583104-18582827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
42, 59
               

               
Conread position:
               
854-1125
               

               
Cow position:
               
chr12:9143280-9143555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
48, 14
               

               
Conread position:
               
855-1055
               

               
Cow position:
               
chr12:33319774-33319569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
46, 54
               

               
Conread position:
               
857-1152
               

               
Cow position:
               
chr12:25343678-25343971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
54, 37
               

               
Conread position:
               
861-1151
               

               
Cow position:
               
chr12:42749340-42749635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
84, 39
               

               
Conread position:
               
862-1142
               

               
Cow position:
               
chr12:37514382-37514103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
21, 38
               

               
Conread position:
               
865-1055
               

               
Cow position:
               
chr12:30819145-30819342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
28, 170
               

               
Conread position:
               
871-1124
               

               
Cow position:
               
chr12:5554426-5554174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
21, 46
               

               
Conread position:
               
877-1141
               

               
Cow position:
               
chr12:36261604-36261876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
882-1148
               

               
Cow position:
               
chr12:5839738-5839476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
20, 160
               

               
Conread position:
               
887-1141
               

               
Cow position:
               
chr12:17252273-17252026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
52, 145
               

               
Conread position:
               
889-1146
               

               
Cow position:
               
chr12:12232810-12233066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
53, 73
               

               
Conread position:
               
890-1118
               

               
Cow position:
               
chr12:33948842-33949057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
912-1133
               

               
Cow position:
               
chr12:24437685-24437458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
31, 151
               

               
Conread position:
               
914-1120
               

               
Cow position:
               
chr12:44861302-44861098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
203, 113
               

               
Conread position:
               
914-1143
               

               
Cow position:
               
chr12:23714627-23714855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
28, 126
               

               
Conread position:
               
940-1122
               

               
Cow position:
               
chr12:6480624-6480803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
112, 86
               

               
Conread position:
               
940-1133
               

               
Cow position:
               
chr12:4512466-4512277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
183, 79
               

               
Conread position:
               
940-1133
               

               
Cow position:
               
chr12:14986733-14986922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
179, 79
               

               
Conread position:
               
940-1133
               

               
Cow position:
               
chr12:25528576-25528390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
940-1144
               

               
Cow position:
               
chr12:27430490-27430702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
76, 129
               

               
Conread position:
               
940-1147
               

               
Cow position:
               
chr12:29731298-29731494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
940-1147
               

               
Cow position:
               
chr12:43551238-43551033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
61, 91
               

               
Conread position:
               
940-1152
               

               
Cow position:
               
chr12:15060474-15060262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
78, 65
               

               
Conread position:
               
941-1148
               

               
Cow position:
               
chr12:45039095-45039293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
943-1126
               

               
Cow position:
               
chr12:20355202-20355388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
944-1145
               

               
Cow position:
               
chr12:583522-583320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
946-1145
               

               
Cow position:
               
chr12:4014443-4014238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
956-1126
               

               
Cow position:
               
chr12:1952802-1952640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
958-1125
               

               
Cow position:
               
chr12:29762248-29762079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
958-1133
               

               
Cow position:
               
chr12:2964049-2964219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
166, 75
               

               
Conread position:
               
958-1149
               

               
Cow position:
               
chr12:46106792-46106979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
159, 15
               

               
Conread position:
               
960-1148
               

               
Cow position:
               
chr12:2835407-2835591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
99, 53
               

               
Conread position:
               
967-1146
               

               
Cow position:
               
chr12:8710994-8711168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
138, 67
               

               
Conread position:
               
968-1151
               

               
Cow position:
               
chr12:40435031-40434855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
969-1141
               

               
Cow position:
               
chr12:44892220-44892388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
975-1152
               

               
Cow position:
               
chr12:38165522-38165351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
60, 0
               
Show alignments to all cow chromosomes.