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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8026P06.3
        

               
Conread position:
               
739-1125
               

               
Cow position:
               
chr17:14026049-14025664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
29, 40
               

               
Conread position:
               
764-1139
               

               
Cow position:
               
chr17:6423647-6424012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
120, 45
               

               
Conread position:
               
768-1143
               

               
Cow position:
               
chr17:36814241-36814624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
38, 278
               

               
Conread position:
               
773-1125
               

               
Cow position:
               
chr17:32989377-32989716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 16
               

               
Conread position:
               
773-1140
               

               
Cow position:
               
chr17:32993723-32993369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 16
               

               
Conread position:
               
790-1148
               

               
Cow position:
               
chr17:5011756-5012111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
15, 39
               

               
Conread position:
               
796-1125
               

               
Cow position:
               
chr17:40331683-40332022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
65, 17
               

               
Conread position:
               
797-1099
               

               
Cow position:
               
chr17:18473098-18473380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
124, 16
               

               
Conread position:
               
797-1123
               

               
Cow position:
               
chr17:1562852-1562550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
797-1142
               

               
Cow position:
               
chr17:20932248-20932588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
84, 14
               

               
Conread position:
               
797-1146
               

               
Cow position:
               
chr17:21738960-21738605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
84, 103
               

               
Conread position:
               
800-1133
               

               
Cow position:
               
chr17:34791148-34790814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 234
               

               
Conread position:
               
800-1141
               

               
Cow position:
               
chr17:36864546-36864886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
16, 69
               

               
Conread position:
               
800-1146
               

               
Cow position:
               
chr17:7692984-7693331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
114, 9
               

               
Conread position:
               
801-1152
               

               
Cow position:
               
chr17:15684431-15684775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
13, 83
               

               
Conread position:
               
814-1121
               

               
Cow position:
               
chr17:1025888-1025595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
131, 74
               

               
Conread position:
               
815-1108
               

               
Cow position:
               
chr17:5514693-5514983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
90, 81
               

               
Conread position:
               
815-1144
               

               
Cow position:
               
chr17:32419181-32418855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
16, 47
               

               
Conread position:
               
815-1145
               

               
Cow position:
               
chr17:3577475-3577794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
75, 43
               

               
Conread position:
               
815-1149
               

               
Cow position:
               
chr17:12108738-12109074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
5, 73
               

               
Conread position:
               
815-1150
               

               
Cow position:
               
chr17:27058622-27058281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
66, 115
               

               
Conread position:
               
816-941
               

               
Cow position:
               
chr17:10510724-10510599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
816-988
               

               
Cow position:
               
chr17:1275459-1275634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
79, 114
               

               
Conread position:
               
816-1004
               

               
Cow position:
               
chr17:4968048-4968239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
125, 27
               

               
Conread position:
               
816-1007
               

               
Cow position:
               
chr17:38646994-38647191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
82, 36
               

               
Conread position:
               
816-1010
               

               
Cow position:
               
chr17:3503515-3503714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
816-1017
               

               
Cow position:
               
chr17:11368916-11368710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
65, 15
               

               
Conread position:
               
816-1017
               

               
Cow position:
               
chr17:32017945-32017752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
816-1026
               

               
Cow position:
               
chr17:1040680-1040893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
126, 78
               

               
Conread position:
               
816-1026
               

               
Cow position:
               
chr17:23563856-23563644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
129, 56
               

               
Conread position:
               
816-1026
               

               
Cow position:
               
chr17:40421604-40421820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
87, 50
               

               
Conread position:
               
816-1027
               

               
Cow position:
               
chr17:979221-979017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
816-1029
               

               
Cow position:
               
chr17:33658136-33657917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
65, 188
               

               
Conread position:
               
816-1031
               

               
Cow position:
               
chr17:30718484-30718264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
78, 57
               

               
Conread position:
               
816-1032
               

               
Cow position:
               
chr17:8690507-8690297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
816-1032
               

               
Cow position:
               
chr17:21495311-21495526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
60, 82
               

               
Conread position:
               
816-1032
               

               
Cow position:
               
chr17:25502044-25502265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
816-1032
               

               
Cow position:
               
chr17:41029889-41030092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
816-1039
               

               
Cow position:
               
chr17:40406378-40406606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
816-1040
               

               
Cow position:
               
chr17:20990260-20990029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
77, 48
               

               
Conread position:
               
816-1041
               

               
Cow position:
               
chr17:5423136-5422905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
76, 47
               

               
Conread position:
               
816-1046
               

               
Cow position:
               
chr17:2275409-2275639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
53, 73
               

               
Conread position:
               
816-1046
               

               
Cow position:
               
chr17:5767849-5768073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
127, 43
               

               
Conread position:
               
816-1047
               

               
Cow position:
               
chr17:24821800-24822031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
103, 31
               

               
Conread position:
               
816-1050
               

               
Cow position:
               
chr17:23517008-23516772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
126, 71
               

               
Conread position:
               
816-1052
               

               
Cow position:
               
chr17:1410305-1410064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
77, 84
               

               
Conread position:
               
816-1054
               

               
Cow position:
               
chr17:24553943-24554174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
221, 30
               

               
Conread position:
               
816-1054
               

               
Cow position:
               
chr17:34751471-34751230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
120, 90
               

               
Conread position:
               
816-1055
               

               
Cow position:
               
chr17:9117581-9117822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
65, 113
               

               
Conread position:
               
816-1055
               

               
Cow position:
               
chr17:15340818-15340574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
127, 32
               

               
Conread position:
               
816-1055
               

               
Cow position:
               
chr17:27203109-27202866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
119, 81
               

               
Conread position:
               
816-1056
               

               
Cow position:
               
chr17:32273752-32273510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
95, 64
               

               
Conread position:
               
816-1059
               

               
Cow position:
               
chr17:6848740-6848975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
66, 51
               

               
Conread position:
               
816-1063
               

               
Cow position:
               
chr17:29157351-29157600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
67, 42
               

               
Conread position:
               
816-1082
               

               
Cow position:
               
chr17:18109151-18108886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 81
               

               
Conread position:
               
816-1084
               

               
Cow position:
               
chr17:28285096-28284830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
80, 38
               

               
Conread position:
               
816-1085
               

               
Cow position:
               
chr17:30665206-30665475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
101, 80
               

               
Conread position:
               
816-1106
               

               
Cow position:
               
chr17:10432042-10431740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
120, 73
               

               
Conread position:
               
816-1107
               

               
Cow position:
               
chr17:20848457-20848749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
82, 45
               

               
Conread position:
               
816-1108
               

               
Cow position:
               
chr17:24773614-24773902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
62, 134
               

               
Conread position:
               
816-1111
               

               
Cow position:
               
chr17:23101274-23100993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
816-1113
               

               
Cow position:
               
chr17:14033706-14033410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
24, 32
               

               
Conread position:
               
816-1117
               

               
Cow position:
               
chr17:40771771-40772065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
65, 80
               

               
Conread position:
               
816-1118
               

               
Cow position:
               
chr17:21115016-21114719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
79, 36
               

               
Conread position:
               
816-1119
               

               
Cow position:
               
chr17:12511041-12510748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
9, 70
               

               
Conread position:
               
816-1119
               

               
Cow position:
               
chr17:20993105-20992801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
65, 211
               

               
Conread position:
               
816-1119
               

               
Cow position:
               
chr17:31037446-31037140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
77, 227
               

               
Conread position:
               
816-1121
               

               
Cow position:
               
chr17:1634555-1634255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
87, 28
               

               
Conread position:
               
816-1122
               

               
Cow position:
               
chr17:13922413-13922722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
65, 228
               

               
Conread position:
               
816-1122
               

               
Cow position:
               
chr17:21325267-21325584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 55
               

               
Conread position:
               
816-1123
               

               
Cow position:
               
chr17:908679-908980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 17
               

               
Conread position:
               
816-1123
               

               
Cow position:
               
chr17:22032756-22032447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
65, 127
               

               
Conread position:
               
816-1123
               

               
Cow position:
               
chr17:31481101-31480789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
89, 56
               

               
Conread position:
               
816-1124
               

               
Cow position:
               
chr17:8598171-8597867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
69, 85
               

               
Conread position:
               
816-1125
               

               
Cow position:
               
chr17:3153637-3153325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 57
               

               
Conread position:
               
816-1125
               

               
Cow position:
               
chr17:11215957-11215650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
69, 162
               

               
Conread position:
               
816-1125
               

               
Cow position:
               
chr17:11832184-11831875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
73, 56
               

               
Conread position:
               
816-1125
               

               
Cow position:
               
chr17:12536534-12536229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
76, 219
               

               
Conread position:
               
816-1125
               

               
Cow position:
               
chr17:17410225-17410543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
65, 85
               

               
Conread position:
               
816-1125
               

               
Cow position:
               
chr17:25128414-25128111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 71
               

               
Conread position:
               
816-1125
               

               
Cow position:
               
chr17:29026002-29026320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
52, 85
               

               
Conread position:
               
816-1125
               

               
Cow position:
               
chr17:40638884-40639190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
122, 67
               

               
Conread position:
               
816-1126
               

               
Cow position:
               
chr17:24883633-24883326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
119, 78
               

               
Conread position:
               
816-1130
               

               
Cow position:
               
chr17:24587556-24587871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 218
               

               
Conread position:
               
816-1130
               

               
Cow position:
               
chr17:25514189-25513869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
123, 99
               

               
Conread position:
               
816-1131
               

               
Cow position:
               
chr17:22564116-22564428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
65, 189
               

               
Conread position:
               
816-1132
               

               
Cow position:
               
chr17:4225559-4225236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
129, 33
               

               
Conread position:
               
816-1132
               

               
Cow position:
               
chr17:20780445-20780774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
74, 266
               

               
Conread position:
               
816-1133
               

               
Cow position:
               
chr17:4786561-4786228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
95, 61
               

               
Conread position:
               
816-1133
               

               
Cow position:
               
chr17:8837015-8836699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
68, 201
               

               
Conread position:
               
816-1133
               

               
Cow position:
               
chr17:10459003-10458682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
124, 223
               

               
Conread position:
               
816-1133
               

               
Cow position:
               
chr17:11664654-11664327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 18
               

               
Conread position:
               
816-1133
               

               
Cow position:
               
chr17:17193428-17193741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
57, 28
               

               
Conread position:
               
816-1133
               

               
Cow position:
               
chr17:18201694-18202013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
99, 31
               

               
Conread position:
               
816-1133
               

               
Cow position:
               
chr17:18720515-18720199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
65, 204
               

               
Conread position:
               
816-1133
               

               
Cow position:
               
chr17:21293106-21292789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
129, 53
               

               
Conread position:
               
816-1133
               

               
Cow position:
               
chr17:24559228-24559543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
95, 61
               

               
Conread position:
               
816-1134
               

               
Cow position:
               
chr17:32278971-32278650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
111, 76
               

               
Conread position:
               
816-1134
               

               
Cow position:
               
chr17:32280601-32280922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
111, 76
               

               
Conread position:
               
816-1136
               

               
Cow position:
               
chr17:30713283-30713600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
39, 84
               

               
Conread position:
               
816-1138
               

               
Cow position:
               
chr17:25342805-25342484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
99, 73
               

               
Conread position:
               
816-1139
               

               
Cow position:
               
chr17:25616193-25616502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
130, 31
               

               
Conread position:
               
816-1139
               

               
Cow position:
               
chr17:33933814-33933491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
81, 213
               

               
Conread position:
               
816-1139
               

               
Cow position:
               
chr17:38614893-38615225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
103, 197
               

               
Conread position:
               
816-1141
               

               
Cow position:
               
chr17:10528800-10528470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
69, 202
               

               
Conread position:
               
816-1142
               

               
Cow position:
               
chr17:24750851-24751172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
125, 70
               

               
Conread position:
               
816-1142
               

               
Cow position:
               
chr17:33793098-33793412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
7, 38
               

               
Conread position:
               
816-1143
               

               
Cow position:
               
chr17:9824603-9824929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 77
               

               
Conread position:
               
816-1143
               

               
Cow position:
               
chr17:25189222-25189548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
103, 191
               

               
Conread position:
               
816-1144
               

               
Cow position:
               
chr17:21743872-21744198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
172, 97
               

               
Conread position:
               
816-1145
               

               
Cow position:
               
chr17:11618520-11618849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
83, 94
               

               
Conread position:
               
816-1145
               

               
Cow position:
               
chr17:24928411-24928744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
66, 102
               

               
Conread position:
               
816-1146
               

               
Cow position:
               
chr17:21959752-21959417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
66, 82
               

               
Conread position:
               
816-1146
               

               
Cow position:
               
chr17:24149118-24149459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
108, 84
               

               
Conread position:
               
816-1146
               

               
Cow position:
               
chr17:25117825-25118150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
68, 91
               

               
Conread position:
               
816-1146
               

               
Cow position:
               
chr17:25901131-25901473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
816-1147
               

               
Cow position:
               
chr17:18146119-18146454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
124, 80
               

               
Conread position:
               
816-1148
               

               
Cow position:
               
chr17:7132516-7132157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
65, 257
               

               
Conread position:
               
816-1149
               

               
Cow position:
               
chr17:26631877-26631540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
109, 54
               

               
Conread position:
               
816-1150
               

               
Cow position:
               
chr17:5280708-5280381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
194, 30
               

               
Conread position:
               
816-1150
               

               
Cow position:
               
chr17:21489689-21489368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
119, 78
               

               
Conread position:
               
816-1150
               

               
Cow position:
               
chr17:32349007-32349332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
95, 53
               

               
Conread position:
               
816-1151
               

               
Cow position:
               
chr17:14652846-14652513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
124, 71
               

               
Conread position:
               
816-1151
               

               
Cow position:
               
chr17:27730474-27730817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
103, 199
               

               
Conread position:
               
816-1152
               

               
Cow position:
               
chr17:13940384-13940046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
99, 53
               

               
Conread position:
               
816-1152
               

               
Cow position:
               
chr17:17682968-17682644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
49, 90
               

               
Conread position:
               
816-1152
               

               
Cow position:
               
chr17:20032977-20032638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
49, 72
               

               
Conread position:
               
816-1152
               

               
Cow position:
               
chr17:20884457-20884799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
104, 82
               

               
Conread position:
               
816-1152
               

               
Cow position:
               
chr17:34860317-34860641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
89, 66
               

               
Conread position:
               
817-991
               

               
Cow position:
               
chr17:21478987-21478808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
817-1038
               

               
Cow position:
               
chr17:24580361-24580136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
58, 169
               

               
Conread position:
               
817-1054
               

               
Cow position:
               
chr17:9746450-9746688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
128, 228
               

               
Conread position:
               
817-1056
               

               
Cow position:
               
chr17:12591102-12591354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
817-1076
               

               
Cow position:
               
chr17:18495585-18495325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
72, 107
               

               
Conread position:
               
817-1107
               

               
Cow position:
               
chr17:1035662-1035369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
94, 72
               

               
Conread position:
               
817-1108
               

               
Cow position:
               
chr17:6329049-6329338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
76, 80
               

               
Conread position:
               
817-1119
               

               
Cow position:
               
chr17:5000643-5000364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
116, 57
               

               
Conread position:
               
817-1124
               

               
Cow position:
               
chr17:24973887-24974185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
168, 70
               

               
Conread position:
               
817-1126
               

               
Cow position:
               
chr17:21806514-21806205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
62, 27
               

               
Conread position:
               
817-1127
               

               
Cow position:
               
chr17:21003893-21003585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 130
               

               
Conread position:
               
817-1133
               

               
Cow position:
               
chr17:25612024-25612338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
76, 56
               

               
Conread position:
               
817-1133
               

               
Cow position:
               
chr17:26448477-26448797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
20, 84
               

               
Conread position:
               
817-1144
               

               
Cow position:
               
chr17:42419659-42419965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
817-1145
               

               
Cow position:
               
chr17:21973198-21972861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
74, 218
               

               
Conread position:
               
817-1145
               

               
Cow position:
               
chr17:40741583-40741916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
21, 77
               

               
Conread position:
               
817-1146
               

               
Cow position:
               
chr17:36791068-36791385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
27, 9
               

               
Conread position:
               
817-1149
               

               
Cow position:
               
chr17:17222280-17222610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
56, 92
               

               
Conread position:
               
817-1150
               

               
Cow position:
               
chr17:23063650-23063992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
42, 63
               

               
Conread position:
               
817-1150
               

               
Cow position:
               
chr17:32027520-32027183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
65, 85
               

               
Conread position:
               
818-1032
               

               
Cow position:
               
chr17:21758202-21757986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
125, 68
               

               
Conread position:
               
818-1085
               

               
Cow position:
               
chr17:25097399-25097656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
818-1125
               

               
Cow position:
               
chr17:31856607-31856915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
64, 189
               

               
Conread position:
               
818-1126
               

               
Cow position:
               
chr17:33288719-33288414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
84, 36
               

               
Conread position:
               
818-1138
               

               
Cow position:
               
chr17:7803237-7802918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
97, 24
               

               
Conread position:
               
819-1125
               

               
Cow position:
               
chr17:36275275-36275580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
90, 109
               

               
Conread position:
               
819-1138
               

               
Cow position:
               
chr17:20800754-20801072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
92, 68
               

               
Conread position:
               
819-1145
               

               
Cow position:
               
chr17:9966090-9965760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
66, 78
               

               
Conread position:
               
820-1072
               

               
Cow position:
               
chr17:35338977-35338724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
75, 88
               

               
Conread position:
               
820-1109
               

               
Cow position:
               
chr17:7437109-7437398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
64, 77
               

               
Conread position:
               
820-1124
               

               
Cow position:
               
chr17:20022578-20022272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
86, 222
               

               
Conread position:
               
820-1134
               

               
Cow position:
               
chr17:39606367-39606676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
7, 45
               

               
Conread position:
               
820-1143
               

               
Cow position:
               
chr17:21599742-21599421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
107, 63
               

               
Conread position:
               
820-1143
               

               
Cow position:
               
chr17:26230889-26231222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
63, 137
               

               
Conread position:
               
822-1117
               

               
Cow position:
               
chr17:3371574-3371856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
210, 64
               

               
Conread position:
               
822-1125
               

               
Cow position:
               
chr17:25511182-25511485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
73, 102
               

               
Conread position:
               
822-1137
               

               
Cow position:
               
chr17:11278090-11277772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
60, 87
               

               
Conread position:
               
822-1146
               

               
Cow position:
               
chr17:32138479-32138153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 32
               

               
Conread position:
               
823-1125
               

               
Cow position:
               
chr17:5372588-5372289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
79, 211
               

               
Conread position:
               
826-988
               

               
Cow position:
               
chr17:25541875-25541706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
64, 18
               

               
Conread position:
               
826-1109
               

               
Cow position:
               
chr17:39771340-39771629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
101, 82
               

               
Conread position:
               
826-1123
               

               
Cow position:
               
chr17:9770455-9770747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
115, 122
               

               
Conread position:
               
826-1126
               

               
Cow position:
               
chr17:27429520-27429800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
55, 97
               

               
Conread position:
               
826-1149
               

               
Cow position:
               
chr17:3883803-3883473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
80, 152
               

               
Conread position:
               
827-1095
               

               
Cow position:
               
chr17:7697999-7698268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
118, 46
               

               
Conread position:
               
829-1108
               

               
Cow position:
               
chr17:36331011-36330741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
109, 143
               

               
Conread position:
               
829-1123
               

               
Cow position:
               
chr17:22051645-22051350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
87, 95
               

               
Conread position:
               
829-1125
               

               
Cow position:
               
chr17:18934204-18934499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
73, 135
               

               
Conread position:
               
829-1148
               

               
Cow position:
               
chr17:21039511-21039820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 23
               

               
Conread position:
               
830-1108
               

               
Cow position:
               
chr17:10446867-10447139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
185, 59
               

               
Conread position:
               
830-1122
               

               
Cow position:
               
chr17:12289469-12289170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
53, 188
               

               
Conread position:
               
830-1125
               

               
Cow position:
               
chr17:11215283-11214981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
89, 283
               

               
Conread position:
               
830-1133
               

               
Cow position:
               
chr17:32333144-32332840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 63
               

               
Conread position:
               
830-1149
               

               
Cow position:
               
chr17:31581432-31581737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
831-1124
               

               
Cow position:
               
chr17:24004327-24004615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
108, 25
               

               
Conread position:
               
833-1138
               

               
Cow position:
               
chr17:25126303-25126598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
48, 111
               

               
Conread position:
               
834-1052
               

               
Cow position:
               
chr17:22017135-22016916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
57, 154
               

               
Conread position:
               
834-1125
               

               
Cow position:
               
chr17:29715246-29714971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
64, 40
               

               
Conread position:
               
834-1141
               

               
Cow position:
               
chr17:37522896-37523209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
90, 9
               

               
Conread position:
               
835-1130
               

               
Cow position:
               
chr17:32471831-32471542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
49, 206
               

               
Conread position:
               
835-1140
               

               
Cow position:
               
chr17:6936722-6936418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
51, 37
               

               
Conread position:
               
836-1144
               

               
Cow position:
               
chr17:37816236-37815928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
85, 56
               

               
Conread position:
               
837-1046
               

               
Cow position:
               
chr17:18848206-18847989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
837-1151
               

               
Cow position:
               
chr17:33155200-33154889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
99, 208
               

               
Conread position:
               
839-1125
               

               
Cow position:
               
chr17:9853944-9854225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
198, 54
               

               
Conread position:
               
839-1125
               

               
Cow position:
               
chr17:24787066-24786782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
106, 60
               

               
Conread position:
               
839-1150
               

               
Cow position:
               
chr17:11912546-11912235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
43, 17
               

               
Conread position:
               
839-1150
               

               
Cow position:
               
chr17:28468087-28468396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
44, 27
               

               
Conread position:
               
840-1025
               

               
Cow position:
               
chr17:21243831-21243642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
840-1108
               

               
Cow position:
               
chr17:1063138-1063394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
105, 45
               

               
Conread position:
               
840-1122
               

               
Cow position:
               
chr17:20090672-20090389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
101, 16
               

               
Conread position:
               
840-1124
               

               
Cow position:
               
chr17:25800924-25800642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 49
               

               
Conread position:
               
840-1125
               

               
Cow position:
               
chr17:20157563-20157851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
56, 127
               

               
Conread position:
               
840-1131
               

               
Cow position:
               
chr17:30728469-30728756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
840-1133
               

               
Cow position:
               
chr17:7810786-7810496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
197, 52
               

               
Conread position:
               
840-1139
               

               
Cow position:
               
chr17:15102932-15102632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
98, 29
               

               
Conread position:
               
840-1145
               

               
Cow position:
               
chr17:20072133-20071839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
9, 59
               

               
Conread position:
               
840-1151
               

               
Cow position:
               
chr17:26513145-26513461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
53, 107
               

               
Conread position:
               
840-1152
               

               
Cow position:
               
chr17:6318909-6318602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
54, 59
               

               
Conread position:
               
840-1152
               

               
Cow position:
               
chr17:17059384-17059689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
53, 22
               

               
Conread position:
               
841-1125
               

               
Cow position:
               
chr17:4106033-4105749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
98, 22
               

               
Conread position:
               
841-1125
               

               
Cow position:
               
chr17:4121769-4121484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
98, 22
               

               
Conread position:
               
844-1137
               

               
Cow position:
               
chr17:24824204-24824502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 49
               

               
Conread position:
               
844-1139
               

               
Cow position:
               
chr17:17044371-17044078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
61, 49
               

               
Conread position:
               
849-1140
               

               
Cow position:
               
chr17:24613188-24613483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
72, 36
               

               
Conread position:
               
849-1143
               

               
Cow position:
               
chr17:3388792-3389096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
50, 11
               

               
Conread position:
               
849-1150
               

               
Cow position:
               
chr17:35149561-35149258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
84, 182
               

               
Conread position:
               
850-1105
               

               
Cow position:
               
chr17:40851943-40852191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
67, 37
               

               
Conread position:
               
850-1125
               

               
Cow position:
               
chr17:40412554-40412822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
48, 72
               

               
Conread position:
               
850-1141
               

               
Cow position:
               
chr17:4264190-4264484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
33, 23
               

               
Conread position:
               
850-1142
               

               
Cow position:
               
chr17:3467727-3468008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
89, 37
               

               
Conread position:
               
851-1056
               

               
Cow position:
               
chr17:17982855-17982664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
183, 34
               

               
Conread position:
               
853-1144
               

               
Cow position:
               
chr17:21472204-21471924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
42, 18
               

               
Conread position:
               
855-1099
               

               
Cow position:
               
chr17:3202440-3202194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
70, 156
               

               
Conread position:
               
855-1124
               

               
Cow position:
               
chr17:29995465-29995193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
37, 206
               

               
Conread position:
               
855-1125
               

               
Cow position:
               
chr17:33164844-33164577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
35, 74
               

               
Conread position:
               
855-1149
               

               
Cow position:
               
chr17:12325790-12325504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
84, 41
               

               
Conread position:
               
855-1152
               

               
Cow position:
               
chr17:18767020-18766720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
88, 32
               

               
Conread position:
               
857-1132
               

               
Cow position:
               
chr17:25473304-25473029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
35, 5
               

               
Conread position:
               
858-1040
               

               
Cow position:
               
chr17:39736150-39736337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
858-1103
               

               
Cow position:
               
chr17:26575255-26575001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
46, 197
               

               
Conread position:
               
858-1133
               

               
Cow position:
               
chr17:12959081-12959356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
36, 65
               

               
Conread position:
               
860-1136
               

               
Cow position:
               
chr17:29084158-29084422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
83, 33
               

               
Conread position:
               
861-1107
               

               
Cow position:
               
chr17:45296394-45296631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
84, 37
               

               
Conread position:
               
863-1108
               

               
Cow position:
               
chr17:24163018-24163260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
27, 168
               

               
Conread position:
               
870-1125
               

               
Cow position:
               
chr17:37341053-37340788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
22, 180
               

               
Conread position:
               
877-1089
               

               
Cow position:
               
chr17:7108731-7108933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
207, 20
               

               
Conread position:
               
877-1122
               

               
Cow position:
               
chr17:21466269-21466018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
880-1142
               

               
Cow position:
               
chr17:26637858-26637594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
26, 65
               

               
Conread position:
               
888-1140
               

               
Cow position:
               
chr17:25466994-25467246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
53, 7
               

               
Conread position:
               
889-1125
               

               
Cow position:
               
chr17:40276746-40276984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
56, 140
               

               
Conread position:
               
897-1133
               

               
Cow position:
               
chr17:42150405-42150639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
42, 138
               

               
Conread position:
               
900-1107
               

               
Cow position:
               
chr17:17034966-17035171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
39, 133
               

               
Conread position:
               
901-1150
               

               
Cow position:
               
chr17:7959198-7959447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
38, 99
               

               
Conread position:
               
913-1141
               

               
Cow position:
               
chr17:31563652-31563423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
124, 51
               

               
Conread position:
               
913-1143
               

               
Cow position:
               
chr17:30501785-30501552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
30, 124
               

               
Conread position:
               
917-1134
               

               
Cow position:
               
chr17:7037586-7037368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
11, 90
               

               
Conread position:
               
933-1146
               

               
Cow position:
               
chr17:36468136-36467925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
5, 73
               

               
Conread position:
               
937-1152
               

               
Cow position:
               
chr17:12963548-12963344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
6, 66
               

               
Conread position:
               
939-1108
               

               
Cow position:
               
chr17:24767226-24767062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
939-1131
               

               
Cow position:
               
chr17:21676952-21677140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
939-1146
               

               
Cow position:
               
chr17:21236584-21236791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
181, 95
               

               
Conread position:
               
940-1119
               

               
Cow position:
               
chr17:7711500-7711673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
940-1123
               

               
Cow position:
               
chr17:946420-946597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
940-1133
               

               
Cow position:
               
chr17:10222147-10221959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
940-1133
               

               
Cow position:
               
chr17:11921102-11920906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
170, 73
               

               
Conread position:
               
940-1133
               

               
Cow position:
               
chr17:20359175-20359362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
70, 65
               

               
Conread position:
               
940-1133
               

               
Cow position:
               
chr17:24841758-24841949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
70, 65
               

               
Conread position:
               
940-1133
               

               
Cow position:
               
chr17:26183407-26183598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
940-1138
               

               
Cow position:
               
chr17:10016342-10016532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
940-1141
               

               
Cow position:
               
chr17:39963940-39964135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
940-1142
               

               
Cow position:
               
chr17:30900373-30900574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 49
               

               
Conread position:
               
940-1147
               

               
Cow position:
               
chr17:21718934-21718732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
940-1150
               

               
Cow position:
               
chr17:22081453-22081256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
940-1152
               

               
Cow position:
               
chr17:20929304-20929514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
940-1152
               

               
Cow position:
               
chr17:36574060-36573853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
70, 65
               

               
Conread position:
               
941-1133
               

               
Cow position:
               
chr17:20836155-20836344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
181, 21
               

               
Conread position:
               
944-1148
               

               
Cow position:
               
chr17:24895140-24895343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
83, 146
               

               
Conread position:
               
944-1152
               

               
Cow position:
               
chr17:2729846-2729647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
947-1122
               

               
Cow position:
               
chr17:14024561-14024388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
70, 58
               

               
Conread position:
               
947-1152
               

               
Cow position:
               
chr17:3387787-3387987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
948-1133
               

               
Cow position:
               
chr17:8663575-8663758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
958-1125
               

               
Cow position:
               
chr17:12215176-12215010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
65, 72
               

               
Conread position:
               
958-1141
               

               
Cow position:
               
chr17:9260531-9260352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
958-1148
               

               
Cow position:
               
chr17:17782136-17782317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
960-1151
               

               
Cow position:
               
chr17:27606600-27606782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
962-1125
               

               
Cow position:
               
chr17:34806582-34806420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
73, 96
               

               
Conread position:
               
967-1148
               

               
Cow position:
               
chr17:22241094-22241274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
68, 52
               

               
Conread position:
               
992-1148
               

               
Cow position:
               
chr17:20930417-20930570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
16, 36
               
Show alignments to all cow chromosomes.