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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8026P06.3
        

               
Conread position:
               
774-1033
               

               
Cow position:
               
chr25:6928657-6928395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 48
               

               
Conread position:
               
774-1054
               

               
Cow position:
               
chr25:23917696-23917974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
123, 15
               

               
Conread position:
               
779-1125
               

               
Cow position:
               
chr25:24669578-24669252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
797-1125
               

               
Cow position:
               
chr25:21245731-21245393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
141, 92
               

               
Conread position:
               
799-1126
               

               
Cow position:
               
chr25:22315081-22315405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
87, 14
               

               
Conread position:
               
804-1138
               

               
Cow position:
               
chr25:14720624-14720942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
19, 13
               

               
Conread position:
               
811-1114
               

               
Cow position:
               
chr25:16319254-16318961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
9, 21
               

               
Conread position:
               
811-1141
               

               
Cow position:
               
chr25:30618950-30619285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
134, 85
               

               
Conread position:
               
811-1151
               

               
Cow position:
               
chr25:18487557-18487897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
116, 66
               

               
Conread position:
               
814-1025
               

               
Cow position:
               
chr25:25051492-25051272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
814-1095
               

               
Cow position:
               
chr25:788154-788427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
125, 32
               

               
Conread position:
               
815-1099
               

               
Cow position:
               
chr25:28930791-28930511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
81, 13
               

               
Conread position:
               
816-951
               

               
Cow position:
               
chr25:20211189-20211054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
129, 44
               

               
Conread position:
               
816-968
               

               
Cow position:
               
chr25:13139711-13139872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
816-979
               

               
Cow position:
               
chr25:7449699-7449859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
72, 6
               

               
Conread position:
               
816-988
               

               
Cow position:
               
chr25:24051854-24052034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
70, 47
               

               
Conread position:
               
816-1004
               

               
Cow position:
               
chr25:14117984-14118175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
69, 147
               

               
Conread position:
               
816-1010
               

               
Cow position:
               
chr25:15377219-15377416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
65, 26
               

               
Conread position:
               
816-1025
               

               
Cow position:
               
chr25:6961263-6961048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
74, 61
               

               
Conread position:
               
816-1041
               

               
Cow position:
               
chr25:11661925-11661697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
126, 82
               

               
Conread position:
               
816-1042
               

               
Cow position:
               
chr25:27531381-27531151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
70, 26
               

               
Conread position:
               
816-1045
               

               
Cow position:
               
chr25:26654801-26655030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
65, 81
               

               
Conread position:
               
816-1046
               

               
Cow position:
               
chr25:32277707-32277483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
36, 89
               

               
Conread position:
               
816-1050
               

               
Cow position:
               
chr25:28188055-28187815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
816-1055
               

               
Cow position:
               
chr25:12319456-12319216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
71, 130
               

               
Conread position:
               
816-1055
               

               
Cow position:
               
chr25:15254440-15254211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
127, 10
               

               
Conread position:
               
816-1055
               

               
Cow position:
               
chr25:22751118-22750871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
44, 85
               

               
Conread position:
               
816-1093
               

               
Cow position:
               
chr25:17566479-17566759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
74, 116
               

               
Conread position:
               
816-1096
               

               
Cow position:
               
chr25:11066254-11065968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
66, 85
               

               
Conread position:
               
816-1099
               

               
Cow position:
               
chr25:17342347-17342635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
71, 198
               

               
Conread position:
               
816-1100
               

               
Cow position:
               
chr25:22369285-22369561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
118, 32
               

               
Conread position:
               
816-1106
               

               
Cow position:
               
chr25:2624700-2624975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
816-1108
               

               
Cow position:
               
chr25:20023498-20023211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
75, 225
               

               
Conread position:
               
816-1108
               

               
Cow position:
               
chr25:36835532-36835249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
69, 22
               

               
Conread position:
               
816-1111
               

               
Cow position:
               
chr25:36872253-36872549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
124, 79
               

               
Conread position:
               
816-1114
               

               
Cow position:
               
chr25:10504446-10504146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
67, 46
               

               
Conread position:
               
816-1117
               

               
Cow position:
               
chr25:6683171-6682858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
77, 28
               

               
Conread position:
               
816-1121
               

               
Cow position:
               
chr25:448275-447965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
73, 156
               

               
Conread position:
               
816-1123
               

               
Cow position:
               
chr25:1838129-1838442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
124, 80
               

               
Conread position:
               
816-1123
               

               
Cow position:
               
chr25:20008026-20008333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
122, 54
               

               
Conread position:
               
816-1123
               

               
Cow position:
               
chr25:26133932-26134245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
75, 83
               

               
Conread position:
               
816-1123
               

               
Cow position:
               
chr25:26136931-26136622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
104, 69
               

               
Conread position:
               
816-1125
               

               
Cow position:
               
chr25:4488811-4489103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
68, 42
               

               
Conread position:
               
816-1125
               

               
Cow position:
               
chr25:7216722-7217016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
85, 28
               

               
Conread position:
               
816-1125
               

               
Cow position:
               
chr25:21668137-21668448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
82, 109
               

               
Conread position:
               
816-1125
               

               
Cow position:
               
chr25:33557165-33557466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
65, 106
               

               
Conread position:
               
816-1125
               

               
Cow position:
               
chr25:36081768-36082068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
110, 73
               

               
Conread position:
               
816-1125
               

               
Cow position:
               
chr25:41151069-41150764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
123, 32
               

               
Conread position:
               
816-1126
               

               
Cow position:
               
chr25:26087412-26087719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
93, 58
               

               
Conread position:
               
816-1127
               

               
Cow position:
               
chr25:19129744-19130055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
48, 189
               

               
Conread position:
               
816-1127
               

               
Cow position:
               
chr25:21893227-21893537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
86, 219
               

               
Conread position:
               
816-1130
               

               
Cow position:
               
chr25:9843067-9843387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 46
               

               
Conread position:
               
816-1133
               

               
Cow position:
               
chr25:1824204-1823885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
95, 42
               

               
Conread position:
               
816-1133
               

               
Cow position:
               
chr25:4521943-4521634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
65, 26
               

               
Conread position:
               
816-1133
               

               
Cow position:
               
chr25:6996676-6996994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
66, 83
               

               
Conread position:
               
816-1133
               

               
Cow position:
               
chr25:7641559-7641248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
75, 24
               

               
Conread position:
               
816-1133
               

               
Cow position:
               
chr25:13566853-13567191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
66, 293
               

               
Conread position:
               
816-1133
               

               
Cow position:
               
chr25:27532780-27532466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
69, 159
               

               
Conread position:
               
816-1133
               

               
Cow position:
               
chr25:35347799-35348115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
69, 81
               

               
Conread position:
               
816-1133
               

               
Cow position:
               
chr25:40904929-40904621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
62, 28
               

               
Conread position:
               
816-1136
               

               
Cow position:
               
chr25:26089923-26089616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
65, 34
               

               
Conread position:
               
816-1137
               

               
Cow position:
               
chr25:14791645-14791966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
60, 110
               

               
Conread position:
               
816-1137
               

               
Cow position:
               
chr25:20157406-20157074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
53, 28
               

               
Conread position:
               
816-1138
               

               
Cow position:
               
chr25:8120672-8120991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
41, 55
               

               
Conread position:
               
816-1138
               

               
Cow position:
               
chr25:9002567-9002881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
95, 61
               

               
Conread position:
               
816-1138
               

               
Cow position:
               
chr25:26679119-26679441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 80
               

               
Conread position:
               
816-1140
               

               
Cow position:
               
chr25:33457621-33457939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
69, 218
               

               
Conread position:
               
816-1141
               

               
Cow position:
               
chr25:17119636-17119960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
95, 54
               

               
Conread position:
               
816-1141
               

               
Cow position:
               
chr25:30816777-30817110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
65, 219
               

               
Conread position:
               
816-1142
               

               
Cow position:
               
chr25:11051421-11051740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
68, 10
               

               
Conread position:
               
816-1143
               

               
Cow position:
               
chr25:18202034-18201707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
41, 47
               

               
Conread position:
               
816-1144
               

               
Cow position:
               
chr25:11433062-11432736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 221
               

               
Conread position:
               
816-1144
               

               
Cow position:
               
chr25:12097733-12098054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
62, 40
               

               
Conread position:
               
816-1144
               

               
Cow position:
               
chr25:20785694-20785366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
129, 71
               

               
Conread position:
               
816-1147
               

               
Cow position:
               
chr25:5920832-5921165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
66, 199
               

               
Conread position:
               
816-1147
               

               
Cow position:
               
chr25:6464140-6463801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
68, 159
               

               
Conread position:
               
816-1150
               

               
Cow position:
               
chr25:22178812-22179133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
129, 50
               

               
Conread position:
               
816-1150
               

               
Cow position:
               
chr25:24572960-24573283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
132, 46
               

               
Conread position:
               
816-1152
               

               
Cow position:
               
chr25:20348753-20349097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
70, 57
               

               
Conread position:
               
817-1026
               

               
Cow position:
               
chr25:2136246-2136456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
93, 110
               

               
Conread position:
               
817-1027
               

               
Cow position:
               
chr25:36036888-36036670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
84, 45
               

               
Conread position:
               
817-1055
               

               
Cow position:
               
chr25:22531177-22531416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
76, 35
               

               
Conread position:
               
817-1108
               

               
Cow position:
               
chr25:19364168-19363877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 77
               

               
Conread position:
               
817-1123
               

               
Cow position:
               
chr25:7306194-7306488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
124, 66
               

               
Conread position:
               
817-1123
               

               
Cow position:
               
chr25:19679238-19679549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
66, 8
               

               
Conread position:
               
817-1124
               

               
Cow position:
               
chr25:5846917-5846606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
5, 81
               

               
Conread position:
               
817-1125
               

               
Cow position:
               
chr25:17474619-17474313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
108, 11
               

               
Conread position:
               
817-1125
               

               
Cow position:
               
chr25:30852649-30852965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
54, 19
               

               
Conread position:
               
817-1133
               

               
Cow position:
               
chr25:11585409-11585738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
817-1133
               

               
Cow position:
               
chr25:16921898-16921584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
118, 20
               

               
Conread position:
               
817-1137
               

               
Cow position:
               
chr25:27801179-27801491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
128, 72
               

               
Conread position:
               
817-1142
               

               
Cow position:
               
chr25:12609237-12609562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
73, 35
               

               
Conread position:
               
817-1149
               

               
Cow position:
               
chr25:18294422-18294087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
73, 55
               

               
Conread position:
               
818-980
               

               
Cow position:
               
chr25:26642476-26642647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
818-982
               

               
Cow position:
               
chr25:16570505-16570664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
105, 34
               

               
Conread position:
               
818-1023
               

               
Cow position:
               
chr25:4547823-4547615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
127, 47
               

               
Conread position:
               
818-1025
               

               
Cow position:
               
chr25:17975474-17975273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 33
               

               
Conread position:
               
818-1040
               

               
Cow position:
               
chr25:14157514-14157745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
818-1108
               

               
Cow position:
               
chr25:32453501-32453247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
818-1124
               

               
Cow position:
               
chr25:36555796-36555500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
69, 88
               

               
Conread position:
               
818-1125
               

               
Cow position:
               
chr25:33550401-33550711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
123, 209
               

               
Conread position:
               
818-1129
               

               
Cow position:
               
chr25:38135640-38135957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
64, 196
               

               
Conread position:
               
818-1149
               

               
Cow position:
               
chr25:12510116-12509795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
121, 24
               

               
Conread position:
               
818-1150
               

               
Cow position:
               
chr25:7011078-7010748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
106, 56
               

               
Conread position:
               
818-1152
               

               
Cow position:
               
chr25:7035448-7035783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
22, 83
               

               
Conread position:
               
819-1108
               

               
Cow position:
               
chr25:13443519-13443224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
64, 105
               

               
Conread position:
               
819-1124
               

               
Cow position:
               
chr25:23053454-23053762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
96, 53
               

               
Conread position:
               
819-1125
               

               
Cow position:
               
chr25:26225131-26224836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
71, 100
               

               
Conread position:
               
819-1130
               

               
Cow position:
               
chr25:22756504-22756812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
101, 75
               

               
Conread position:
               
819-1133
               

               
Cow position:
               
chr25:26338345-26338668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
62, 86
               

               
Conread position:
               
819-1141
               

               
Cow position:
               
chr25:33686787-33686466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
108, 58
               

               
Conread position:
               
819-1152
               

               
Cow position:
               
chr25:36020300-36020637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
65, 195
               

               
Conread position:
               
820-1115
               

               
Cow position:
               
chr25:23829233-23828940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
74, 24
               

               
Conread position:
               
821-1151
               

               
Cow position:
               
chr25:24207524-24207187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
64, 74
               

               
Conread position:
               
822-1151
               

               
Cow position:
               
chr25:33959356-33959025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
97, 59
               

               
Conread position:
               
825-1145
               

               
Cow position:
               
chr25:11956707-11957024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
86, 27
               

               
Conread position:
               
826-1130
               

               
Cow position:
               
chr25:21193033-21192735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
60, 104
               

               
Conread position:
               
826-1133
               

               
Cow position:
               
chr25:6292469-6292774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
89, 68
               

               
Conread position:
               
826-1133
               

               
Cow position:
               
chr25:7673189-7673510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
11, 307
               

               
Conread position:
               
827-1109
               

               
Cow position:
               
chr25:23245100-23244820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
116, 69
               

               
Conread position:
               
830-1127
               

               
Cow position:
               
chr25:7816885-7817186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
26, 184
               

               
Conread position:
               
830-1133
               

               
Cow position:
               
chr25:21191392-21191685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
63, 206
               

               
Conread position:
               
831-1032
               

               
Cow position:
               
chr25:4947869-4948074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
62, 40
               

               
Conread position:
               
831-1056
               

               
Cow position:
               
chr25:11830006-11829778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
70, 37
               

               
Conread position:
               
831-1125
               

               
Cow position:
               
chr25:13272473-13272769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
52, 74
               

               
Conread position:
               
834-1026
               

               
Cow position:
               
chr25:11436901-11436701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
834-1063
               

               
Cow position:
               
chr25:10949675-10949436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
17, 132
               

               
Conread position:
               
838-1137
               

               
Cow position:
               
chr25:13767882-13768172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
55, 148
               

               
Conread position:
               
838-1147
               

               
Cow position:
               
chr25:37332132-37331824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
45, 184
               

               
Conread position:
               
839-1092
               

               
Cow position:
               
chr25:15714787-15715039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
104, 32
               

               
Conread position:
               
839-1124
               

               
Cow position:
               
chr25:36746534-36746249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
96, 57
               

               
Conread position:
               
840-1026
               

               
Cow position:
               
chr25:12778619-12778435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
50, 60
               

               
Conread position:
               
840-1037
               

               
Cow position:
               
chr25:4681146-4681343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
101, 82
               

               
Conread position:
               
840-1055
               

               
Cow position:
               
chr25:34169863-34170081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
102, 12
               

               
Conread position:
               
840-1075
               

               
Cow position:
               
chr25:23745172-23745419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
48, 195
               

               
Conread position:
               
840-1092
               

               
Cow position:
               
chr25:7799468-7799721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
101, 55
               

               
Conread position:
               
840-1118
               

               
Cow position:
               
chr25:7007824-7008113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
840-1130
               

               
Cow position:
               
chr25:9990183-9989897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
193, 47
               

               
Conread position:
               
840-1133
               

               
Cow position:
               
chr25:2414728-2415005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
44, 10
               

               
Conread position:
               
840-1133
               

               
Cow position:
               
chr25:13621444-13621154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
57, 47
               

               
Conread position:
               
840-1133
               

               
Cow position:
               
chr25:30279295-30278988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
55, 264
               

               
Conread position:
               
840-1145
               

               
Cow position:
               
chr25:12305191-12305497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
43, 71
               

               
Conread position:
               
840-1148
               

               
Cow position:
               
chr25:7750365-7750671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
51, 186
               

               
Conread position:
               
840-1151
               

               
Cow position:
               
chr25:12806959-12807268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
84, 59
               

               
Conread position:
               
842-1125
               

               
Cow position:
               
chr25:18721203-18720928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
43, 16
               

               
Conread position:
               
844-1063
               

               
Cow position:
               
chr25:40931194-40931416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
49, 33
               

               
Conread position:
               
845-1143
               

               
Cow position:
               
chr25:36716841-36717126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
7, 56
               

               
Conread position:
               
845-1146
               

               
Cow position:
               
chr25:3992703-3993003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 108
               

               
Conread position:
               
848-1017
               

               
Cow position:
               
chr25:14809203-14809370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
95, 37
               

               
Conread position:
               
848-1055
               

               
Cow position:
               
chr25:23504970-23505187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
849-1030
               

               
Cow position:
               
chr25:6134169-6133980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
12, 125
               

               
Conread position:
               
849-1083
               

               
Cow position:
               
chr25:36021247-36021481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
94, 175
               

               
Conread position:
               
850-1047
               

               
Cow position:
               
chr25:38957886-38958082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
88, 108
               

               
Conread position:
               
850-1151
               

               
Cow position:
               
chr25:8346077-8345773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
75, 103
               

               
Conread position:
               
851-1133
               

               
Cow position:
               
chr25:11276478-11276758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
70, 47
               

               
Conread position:
               
855-1108
               

               
Cow position:
               
chr25:26306276-26306020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
36, 206
               

               
Conread position:
               
856-1149
               

               
Cow position:
               
chr25:36074069-36073775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
36, 111
               

               
Conread position:
               
858-1130
               

               
Cow position:
               
chr25:12195284-12195015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
45, 13
               

               
Conread position:
               
858-1133
               

               
Cow position:
               
chr25:15273606-15273871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
87, 37
               

               
Conread position:
               
859-1125
               

               
Cow position:
               
chr25:1840255-1840521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
28, 176
               

               
Conread position:
               
863-1122
               

               
Cow position:
               
chr25:40682676-40682934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
77, 19
               

               
Conread position:
               
865-1142
               

               
Cow position:
               
chr25:7551421-7551150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
37, 81
               

               
Conread position:
               
872-1133
               

               
Cow position:
               
chr25:35762537-35762798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
73, 60
               

               
Conread position:
               
881-1146
               

               
Cow position:
               
chr25:28597656-28597387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
64, 17
               

               
Conread position:
               
882-1133
               

               
Cow position:
               
chr25:22348507-22348249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
883-1106
               

               
Cow position:
               
chr25:35339232-35339009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
59, 17
               

               
Conread position:
               
884-1119
               

               
Cow position:
               
chr25:18288810-18288576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
59, 148
               

               
Conread position:
               
888-1148
               

               
Cow position:
               
chr25:13826399-13826655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
51, 10
               

               
Conread position:
               
891-1125
               

               
Cow position:
               
chr25:22298602-22298832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
54, 110
               

               
Conread position:
               
901-1107
               

               
Cow position:
               
chr25:13222875-13223080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
44, 134
               

               
Conread position:
               
901-1123
               

               
Cow position:
               
chr25:4157262-4157049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
915-1139
               

               
Cow position:
               
chr25:26072568-26072351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
30, 120
               

               
Conread position:
               
922-1124
               

               
Cow position:
               
chr25:9574134-9573936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 56
               

               
Conread position:
               
934-1125
               

               
Cow position:
               
chr25:1802625-1802812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
182, 95
               

               
Conread position:
               
939-1124
               

               
Cow position:
               
chr25:35902766-35902945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
940-1122
               

               
Cow position:
               
chr25:13823699-13823522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
940-1125
               

               
Cow position:
               
chr25:15349885-15349709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
940-1126
               

               
Cow position:
               
chr25:22734028-22734207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
940-1143
               

               
Cow position:
               
chr25:20202933-20203126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
940-1143
               

               
Cow position:
               
chr25:31657257-31657065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
940-1148
               

               
Cow position:
               
chr25:22154044-22154253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
87, 175
               

               
Conread position:
               
940-1151
               

               
Cow position:
               
chr25:8347672-8347877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
940-1151
               

               
Cow position:
               
chr25:22565938-22565740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
941-1134
               

               
Cow position:
               
chr25:28668025-28667841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
941-1145
               

               
Cow position:
               
chr25:9025146-9025343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
943-1132
               

               
Cow position:
               
chr25:14225385-14225574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
943-1143
               

               
Cow position:
               
chr25:18934612-18934417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
192, 92
               

               
Conread position:
               
944-1149
               

               
Cow position:
               
chr25:24115292-24115090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
180, 90
               

               
Conread position:
               
958-1150
               

               
Cow position:
               
chr25:15999514-15999324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
99, 61
               

               
Conread position:
               
961-1142
               

               
Cow position:
               
chr25:21082366-21082190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
51, 59
               

               
Conread position:
               
965-1141
               

               
Cow position:
               
chr25:30709303-30709129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
966-1130
               

               
Cow position:
               
chr25:17141148-17141309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
153, 73
               

               
Conread position:
               
970-1125
               

               
Cow position:
               
chr25:18131328-18131171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
976-1127
               

               
Cow position:
               
chr25:13470658-13470509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
58, 0
               
Show alignments to all cow chromosomes.