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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8026P06.3
        

               
Conread position:
               
767-1126
               

               
Cow position:
               
chr27:23128568-23128219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
51, 21
               

               
Conread position:
               
769-1039
               

               
Cow position:
               
chr27:16478235-16478501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
127, 21
               

               
Conread position:
               
773-1144
               

               
Cow position:
               
chr27:27632508-27632854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
133, 35
               

               
Conread position:
               
774-1125
               

               
Cow position:
               
chr27:8629772-8630119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
120, 39
               

               
Conread position:
               
779-924
               

               
Cow position:
               
chr27:16871817-16871960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
111, 27
               

               
Conread position:
               
796-1149
               

               
Cow position:
               
chr27:27136440-27136792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
137, 17
               

               
Conread position:
               
797-1152
               

               
Cow position:
               
chr27:27554604-27554951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
112, 15
               

               
Conread position:
               
798-1056
               

               
Cow position:
               
chr27:31017751-31018007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
17, 72
               

               
Conread position:
               
799-1056
               

               
Cow position:
               
chr27:15215314-15215045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
799-1143
               

               
Cow position:
               
chr27:27404988-27405335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
9, 72
               

               
Conread position:
               
811-1152
               

               
Cow position:
               
chr27:20869626-20869953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
103, 13
               

               
Conread position:
               
814-1141
               

               
Cow position:
               
chr27:11435257-11435587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
111, 84
               

               
Conread position:
               
815-1054
               

               
Cow position:
               
chr27:1123095-1122851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
128, 90
               

               
Conread position:
               
815-1132
               

               
Cow position:
               
chr27:17331563-17331239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
75, 190
               

               
Conread position:
               
816-979
               

               
Cow position:
               
chr27:20789314-20789484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
79, 38
               

               
Conread position:
               
816-980
               

               
Cow position:
               
chr27:30804403-30804237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
74, 42
               

               
Conread position:
               
816-1004
               

               
Cow position:
               
chr27:16625961-16625770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
816-1025
               

               
Cow position:
               
chr27:8353536-8353328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
125, 22
               

               
Conread position:
               
816-1025
               

               
Cow position:
               
chr27:18593330-18593122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
129, 30
               

               
Conread position:
               
816-1025
               

               
Cow position:
               
chr27:22225532-22225743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
94, 78
               

               
Conread position:
               
816-1026
               

               
Cow position:
               
chr27:22569835-22569633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
81, 40
               

               
Conread position:
               
816-1027
               

               
Cow position:
               
chr27:1498380-1498161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
816-1028
               

               
Cow position:
               
chr27:24014677-24014893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
79, 34
               

               
Conread position:
               
816-1032
               

               
Cow position:
               
chr27:4812817-4813038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
81, 207
               

               
Conread position:
               
816-1032
               

               
Cow position:
               
chr27:27038777-27038995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
94, 43
               

               
Conread position:
               
816-1037
               

               
Cow position:
               
chr27:24321249-24321025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
129, 73
               

               
Conread position:
               
816-1041
               

               
Cow position:
               
chr27:25411454-25411675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
20, 129
               

               
Conread position:
               
816-1045
               

               
Cow position:
               
chr27:4673082-4672843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
73, 229
               

               
Conread position:
               
816-1045
               

               
Cow position:
               
chr27:22418704-22418936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
64, 217
               

               
Conread position:
               
816-1047
               

               
Cow position:
               
chr27:26407102-26407330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
127, 69
               

               
Conread position:
               
816-1051
               

               
Cow position:
               
chr27:23483290-23483047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
76, 149
               

               
Conread position:
               
816-1055
               

               
Cow position:
               
chr27:20641278-20641513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
77, 26
               

               
Conread position:
               
816-1055
               

               
Cow position:
               
chr27:26426268-26426034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
199, 41
               

               
Conread position:
               
816-1063
               

               
Cow position:
               
chr27:27640939-27641197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
70, 171
               

               
Conread position:
               
816-1069
               

               
Cow position:
               
chr27:26959555-26959804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
124, 54
               

               
Conread position:
               
816-1076
               

               
Cow position:
               
chr27:26506788-26506546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
239, 42
               

               
Conread position:
               
816-1084
               

               
Cow position:
               
chr27:31219315-31219063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
123, 54
               

               
Conread position:
               
816-1086
               

               
Cow position:
               
chr27:1768559-1768829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
92, 56
               

               
Conread position:
               
816-1092
               

               
Cow position:
               
chr27:15378415-15378697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
75, 42
               

               
Conread position:
               
816-1103
               

               
Cow position:
               
chr27:7935095-7935382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
122, 67
               

               
Conread position:
               
816-1103
               

               
Cow position:
               
chr27:26239088-26238800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
75, 36
               

               
Conread position:
               
816-1107
               

               
Cow position:
               
chr27:19660998-19660700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
65, 221
               

               
Conread position:
               
816-1108
               

               
Cow position:
               
chr27:23554267-23554558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
111, 82
               

               
Conread position:
               
816-1111
               

               
Cow position:
               
chr27:19685648-19685942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 220
               

               
Conread position:
               
816-1111
               

               
Cow position:
               
chr27:23891002-23890701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
65, 83
               

               
Conread position:
               
816-1114
               

               
Cow position:
               
chr27:26865057-26865343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
129, 47
               

               
Conread position:
               
816-1119
               

               
Cow position:
               
chr27:22489341-22489033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
87, 56
               

               
Conread position:
               
816-1121
               

               
Cow position:
               
chr27:26111846-26112160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
43, 228
               

               
Conread position:
               
816-1123
               

               
Cow position:
               
chr27:6925152-6924837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
65, 199
               

               
Conread position:
               
816-1123
               

               
Cow position:
               
chr27:11151736-11151427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
44, 183
               

               
Conread position:
               
816-1123
               

               
Cow position:
               
chr27:14670321-14670624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
38, 75
               

               
Conread position:
               
816-1123
               

               
Cow position:
               
chr27:22513616-22513926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
16, 34
               

               
Conread position:
               
816-1123
               

               
Cow position:
               
chr27:26087357-26087076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
816-1124
               

               
Cow position:
               
chr27:13638932-13639232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
86, 15
               

               
Conread position:
               
816-1124
               

               
Cow position:
               
chr27:20078927-20078620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
138, 65
               

               
Conread position:
               
816-1125
               

               
Cow position:
               
chr27:590704-591014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
90, 36
               

               
Conread position:
               
816-1125
               

               
Cow position:
               
chr27:14343403-14343681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
152, 67
               

               
Conread position:
               
816-1125
               

               
Cow position:
               
chr27:16589652-16589969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
126, 34
               

               
Conread position:
               
816-1125
               

               
Cow position:
               
chr27:21669060-21669353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
127, 45
               

               
Conread position:
               
816-1125
               

               
Cow position:
               
chr27:26643743-26643457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
78, 40
               

               
Conread position:
               
816-1125
               

               
Cow position:
               
chr27:27245290-27245608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
87, 98
               

               
Conread position:
               
816-1125
               

               
Cow position:
               
chr27:27460512-27460824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
120, 65
               

               
Conread position:
               
816-1126
               

               
Cow position:
               
chr27:22171363-22171055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 222
               

               
Conread position:
               
816-1126
               

               
Cow position:
               
chr27:29164828-29164528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
48, 43
               

               
Conread position:
               
816-1128
               

               
Cow position:
               
chr27:29493849-29494147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
816-1131
               

               
Cow position:
               
chr27:28496315-28496620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
12, 62
               

               
Conread position:
               
816-1133
               

               
Cow position:
               
chr27:4944455-4944761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
76, 48
               

               
Conread position:
               
816-1133
               

               
Cow position:
               
chr27:10307241-10307557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
104, 31
               

               
Conread position:
               
816-1133
               

               
Cow position:
               
chr27:15454274-15453958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
69, 38
               

               
Conread position:
               
816-1133
               

               
Cow position:
               
chr27:18544057-18543736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
87, 191
               

               
Conread position:
               
816-1133
               

               
Cow position:
               
chr27:20748944-20749255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
66, 219
               

               
Conread position:
               
816-1133
               

               
Cow position:
               
chr27:23511053-23510720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
75, 164
               

               
Conread position:
               
816-1134
               

               
Cow position:
               
chr27:30765099-30764779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
65, 179
               

               
Conread position:
               
816-1136
               

               
Cow position:
               
chr27:30871997-30872316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
105, 36
               

               
Conread position:
               
816-1138
               

               
Cow position:
               
chr27:30406974-30407305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
78, 61
               

               
Conread position:
               
816-1140
               

               
Cow position:
               
chr27:15668707-15669034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 55
               

               
Conread position:
               
816-1140
               

               
Cow position:
               
chr27:16088872-16088529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
66, 86
               

               
Conread position:
               
816-1140
               

               
Cow position:
               
chr27:21978076-21978404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
70, 94
               

               
Conread position:
               
816-1140
               

               
Cow position:
               
chr27:29184775-29185104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
109, 90
               

               
Conread position:
               
816-1141
               

               
Cow position:
               
chr27:26984412-26984094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
76, 226
               

               
Conread position:
               
816-1141
               

               
Cow position:
               
chr27:27020040-27020354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
40, 105
               

               
Conread position:
               
816-1143
               

               
Cow position:
               
chr27:16103871-16103548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 150
               

               
Conread position:
               
816-1143
               

               
Cow position:
               
chr27:22035314-22035636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
87, 32
               

               
Conread position:
               
816-1144
               

               
Cow position:
               
chr27:6550520-6550193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
64, 85
               

               
Conread position:
               
816-1144
               

               
Cow position:
               
chr27:26509098-26509421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
111, 61
               

               
Conread position:
               
816-1145
               

               
Cow position:
               
chr27:15315568-15315259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
816-1148
               

               
Cow position:
               
chr27:30915070-30914735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
109, 80
               

               
Conread position:
               
816-1149
               

               
Cow position:
               
chr27:427032-426698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 55
               

               
Conread position:
               
816-1149
               

               
Cow position:
               
chr27:19500172-19500506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
95, 71
               

               
Conread position:
               
816-1150
               

               
Cow position:
               
chr27:11480568-11480910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
69, 250
               

               
Conread position:
               
816-1150
               

               
Cow position:
               
chr27:22220619-22220273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
79, 222
               

               
Conread position:
               
816-1150
               

               
Cow position:
               
chr27:26226228-26226559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
110, 17
               

               
Conread position:
               
816-1151
               

               
Cow position:
               
chr27:6500121-6499785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
105, 64
               

               
Conread position:
               
816-1151
               

               
Cow position:
               
chr27:13875794-13875458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
65, 135
               

               
Conread position:
               
816-1152
               

               
Cow position:
               
chr27:15871223-15870884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
66, 115
               

               
Conread position:
               
816-1152
               

               
Cow position:
               
chr27:17397388-17397724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 219
               

               
Conread position:
               
816-1152
               

               
Cow position:
               
chr27:20354647-20354324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
303, 67
               

               
Conread position:
               
816-1152
               

               
Cow position:
               
chr27:26413190-26413550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
103, 328
               

               
Conread position:
               
817-1000
               

               
Cow position:
               
chr27:21976111-21975927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
128, 56
               

               
Conread position:
               
817-1030
               

               
Cow position:
               
chr27:8405763-8405978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
123, 69
               

               
Conread position:
               
817-1047
               

               
Cow position:
               
chr27:30359467-30359236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
81, 48
               

               
Conread position:
               
817-1052
               

               
Cow position:
               
chr27:8168369-8168610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
94, 82
               

               
Conread position:
               
817-1106
               

               
Cow position:
               
chr27:435297-435005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
55, 48
               

               
Conread position:
               
817-1109
               

               
Cow position:
               
chr27:27694709-27695005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
817-1113
               

               
Cow position:
               
chr27:24331782-24331480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
65, 5
               

               
Conread position:
               
817-1116
               

               
Cow position:
               
chr27:22559762-22560063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
85, 254
               

               
Conread position:
               
817-1117
               

               
Cow position:
               
chr27:19388076-19387783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
128, 57
               

               
Conread position:
               
817-1121
               

               
Cow position:
               
chr27:18558421-18558116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
64, 84
               

               
Conread position:
               
817-1122
               

               
Cow position:
               
chr27:30890349-30890058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
125, 66
               

               
Conread position:
               
817-1123
               

               
Cow position:
               
chr27:23452521-23452220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
122, 81
               

               
Conread position:
               
817-1130
               

               
Cow position:
               
chr27:28931732-28932052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
74, 249
               

               
Conread position:
               
817-1132
               

               
Cow position:
               
chr27:28896940-28896622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
68, 9
               

               
Conread position:
               
817-1138
               

               
Cow position:
               
chr27:2592610-2592279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
66, 313
               

               
Conread position:
               
817-1141
               

               
Cow position:
               
chr27:8062292-8062615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
122, 53
               

               
Conread position:
               
817-1148
               

               
Cow position:
               
chr27:18507704-18507378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
68, 50
               

               
Conread position:
               
817-1150
               

               
Cow position:
               
chr27:31372916-31373241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
65, 130
               

               
Conread position:
               
817-1152
               

               
Cow position:
               
chr27:16965635-16965303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
94, 111
               

               
Conread position:
               
818-1055
               

               
Cow position:
               
chr27:8942622-8942873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
74, 81
               

               
Conread position:
               
818-1055
               

               
Cow position:
               
chr27:30988857-30988617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
58, 79
               

               
Conread position:
               
818-1109
               

               
Cow position:
               
chr27:18739445-18739144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
77, 201
               

               
Conread position:
               
818-1125
               

               
Cow position:
               
chr27:26424525-26424822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
68, 59
               

               
Conread position:
               
818-1133
               

               
Cow position:
               
chr27:22547347-22547643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
123, 68
               

               
Conread position:
               
818-1138
               

               
Cow position:
               
chr27:22386931-22386627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
71, 112
               

               
Conread position:
               
818-1141
               

               
Cow position:
               
chr27:28921836-28922156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
93, 68
               

               
Conread position:
               
818-1147
               

               
Cow position:
               
chr27:20828649-20828971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
77, 28
               

               
Conread position:
               
818-1148
               

               
Cow position:
               
chr27:1353648-1353309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
64, 194
               

               
Conread position:
               
818-1148
               

               
Cow position:
               
chr27:20514882-20514558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
63, 212
               

               
Conread position:
               
818-1150
               

               
Cow position:
               
chr27:26433749-26434084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
67, 126
               

               
Conread position:
               
819-975
               

               
Cow position:
               
chr27:24306888-24306728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
71, 144
               

               
Conread position:
               
819-1143
               

               
Cow position:
               
chr27:16780928-16780595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
72, 148
               

               
Conread position:
               
820-1039
               

               
Cow position:
               
chr27:29504587-29504812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
72, 207
               

               
Conread position:
               
821-1137
               

               
Cow position:
               
chr27:6541687-6541380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
109, 91
               

               
Conread position:
               
821-1150
               

               
Cow position:
               
chr27:24240404-24240081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
75, 37
               

               
Conread position:
               
822-1134
               

               
Cow position:
               
chr27:299326-299629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
48, 32
               

               
Conread position:
               
822-1143
               

               
Cow position:
               
chr27:30868683-30869016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
121, 76
               

               
Conread position:
               
822-1143
               

               
Cow position:
               
chr27:31151434-31151121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
93, 40
               

               
Conread position:
               
826-1134
               

               
Cow position:
               
chr27:7212658-7212985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
827-1152
               

               
Cow position:
               
chr27:23860221-23859887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
13, 180
               

               
Conread position:
               
830-1047
               

               
Cow position:
               
chr27:31148810-31148589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
115, 59
               

               
Conread position:
               
830-1123
               

               
Cow position:
               
chr27:10979912-10979615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
89, 47
               

               
Conread position:
               
830-1125
               

               
Cow position:
               
chr27:27388969-27389273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
53, 208
               

               
Conread position:
               
830-1149
               

               
Cow position:
               
chr27:15865660-15865337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 206
               

               
Conread position:
               
832-1109
               

               
Cow position:
               
chr27:23107854-23108132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 210
               

               
Conread position:
               
832-1133
               

               
Cow position:
               
chr27:20629109-20628804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
106, 65
               

               
Conread position:
               
833-1122
               

               
Cow position:
               
chr27:2644045-2644341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
92, 49
               

               
Conread position:
               
834-1133
               

               
Cow position:
               
chr27:23485258-23484962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
59, 191
               

               
Conread position:
               
834-1141
               

               
Cow position:
               
chr27:26852547-26852846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
107, 49
               

               
Conread position:
               
835-1122
               

               
Cow position:
               
chr27:26999375-26999666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
18, 192
               

               
Conread position:
               
836-1143
               

               
Cow position:
               
chr27:29593585-29593895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
107, 217
               

               
Conread position:
               
838-1055
               

               
Cow position:
               
chr27:20795834-20795612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
840-1122
               

               
Cow position:
               
chr27:23594361-23594076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
98, 132
               

               
Conread position:
               
840-1125
               

               
Cow position:
               
chr27:7412422-7412148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
45, 9
               

               
Conread position:
               
840-1125
               

               
Cow position:
               
chr27:15408995-15409271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
50, 196
               

               
Conread position:
               
840-1125
               

               
Cow position:
               
chr27:28206839-28206558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
59, 30
               

               
Conread position:
               
840-1133
               

               
Cow position:
               
chr27:12459320-12459039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
69, 16
               

               
Conread position:
               
840-1136
               

               
Cow position:
               
chr27:31231048-31231336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
45, 75
               

               
Conread position:
               
840-1144
               

               
Cow position:
               
chr27:10599016-10598723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
98, 45
               

               
Conread position:
               
840-1150
               

               
Cow position:
               
chr27:4720073-4720397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
43, 57
               

               
Conread position:
               
841-1126
               

               
Cow position:
               
chr27:16705290-16705006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
48, 71
               

               
Conread position:
               
842-1126
               

               
Cow position:
               
chr27:12425325-12425041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
100, 14
               

               
Conread position:
               
844-1144
               

               
Cow position:
               
chr27:23559995-23560295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
47, 56
               

               
Conread position:
               
847-1133
               

               
Cow position:
               
chr27:19933097-19932806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
35, 82
               

               
Conread position:
               
850-1126
               

               
Cow position:
               
chr27:10582401-10582124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
65, 30
               

               
Conread position:
               
850-1140
               

               
Cow position:
               
chr27:29798983-29798691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
65, 53
               

               
Conread position:
               
852-1119
               

               
Cow position:
               
chr27:15204203-15204476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
63, 21
               

               
Conread position:
               
854-1149
               

               
Cow position:
               
chr27:2885807-2886105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
67, 40
               

               
Conread position:
               
855-1143
               

               
Cow position:
               
chr27:29615078-29614779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
76, 191
               

               
Conread position:
               
857-1123
               

               
Cow position:
               
chr27:237293-237008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
6, 132
               

               
Conread position:
               
857-1145
               

               
Cow position:
               
chr27:29597727-29598011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
44, 73
               

               
Conread position:
               
859-1121
               

               
Cow position:
               
chr27:20897003-20897262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
42, 178
               

               
Conread position:
               
863-1133
               

               
Cow position:
               
chr27:26617416-26617161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
88, 17
               

               
Conread position:
               
864-1133
               

               
Cow position:
               
chr27:19509030-19508757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
31, 170
               

               
Conread position:
               
867-1135
               

               
Cow position:
               
chr27:28478594-28478322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
28, 163
               

               
Conread position:
               
868-1137
               

               
Cow position:
               
chr27:31210559-31210292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
23, 42
               

               
Conread position:
               
881-1135
               

               
Cow position:
               
chr27:23994421-23994671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
60, 76
               

               
Conread position:
               
890-1122
               

               
Cow position:
               
chr27:15002988-15003222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
53, 158
               

               
Conread position:
               
894-1134
               

               
Cow position:
               
chr27:7343442-7343683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
49, 125
               

               
Conread position:
               
900-1108
               

               
Cow position:
               
chr27:30489430-30489657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
904-1119
               

               
Cow position:
               
chr27:7425212-7425428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
41, 137
               

               
Conread position:
               
904-1125
               

               
Cow position:
               
chr27:23957492-23957272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
38, 153
               

               
Conread position:
               
904-1126
               

               
Cow position:
               
chr27:6106676-6106460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
41, 131
               

               
Conread position:
               
910-1148
               

               
Cow position:
               
chr27:10404147-10404385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
17, 97
               

               
Conread position:
               
939-1100
               

               
Cow position:
               
chr27:15859362-15859518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
939-1143
               

               
Cow position:
               
chr27:11134021-11133824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
940-1125
               

               
Cow position:
               
chr27:19576389-19576569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
164, 93
               

               
Conread position:
               
940-1133
               

               
Cow position:
               
chr27:26793849-26794040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
70, 65
               

               
Conread position:
               
940-1138
               

               
Cow position:
               
chr27:13204393-13204206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
940-1144
               

               
Cow position:
               
chr27:11208620-11208823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
70, 65
               

               
Conread position:
               
940-1145
               

               
Cow position:
               
chr27:21677490-21677696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
77, 65
               

               
Conread position:
               
940-1152
               

               
Cow position:
               
chr27:24358267-24358064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
184, 45
               

               
Conread position:
               
941-1108
               

               
Cow position:
               
chr27:26504235-26504075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
941-1127
               

               
Cow position:
               
chr27:24223885-24223707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
12, 24
               

               
Conread position:
               
943-1151
               

               
Cow position:
               
chr27:23477877-23477672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
155, 62
               

               
Conread position:
               
944-1130
               

               
Cow position:
               
chr27:9253183-9253362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
944-1147
               

               
Cow position:
               
chr27:10581460-10581266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
945-1121
               

               
Cow position:
               
chr27:29183287-29183468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
947-1140
               

               
Cow position:
               
chr27:31183503-31183308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
949-1125
               

               
Cow position:
               
chr27:11528856-11528683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
958-1151
               

               
Cow position:
               
chr27:22748244-22748057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
969-1141
               

               
Cow position:
               
chr27:22150789-22150954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
65, 0
               
Show alignments to all cow chromosomes.