• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8026P06.3
        

               
Conread position:
               
761-1054
               

               
Cow position:
               
chr3:26874408-26874703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 37
               

               
Conread position:
               
767-1124
               

               
Cow position:
               
chr3:65968983-65969351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
142, 47
               

               
Conread position:
               
773-1119
               

               
Cow position:
               
chr3:60597373-60597709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
131, 38
               

               
Conread position:
               
774-1147
               

               
Cow position:
               
chr3:75107626-75107972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
120, 39
               

               
Conread position:
               
774-1152
               

               
Cow position:
               
chr3:50768514-50768885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 39
               

               
Conread position:
               
778-1114
               

               
Cow position:
               
chr3:12978781-12978448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
135, 28
               

               
Conread position:
               
779-1108
               

               
Cow position:
               
chr3:71237993-71238311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
132, 30
               

               
Conread position:
               
786-1052
               

               
Cow position:
               
chr3:22509866-22510135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
20, 28
               

               
Conread position:
               
796-1026
               

               
Cow position:
               
chr3:79094194-79093959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
95, 17
               

               
Conread position:
               
797-1144
               

               
Cow position:
               
chr3:59040420-59040765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
62, 14
               

               
Conread position:
               
797-1146
               

               
Cow position:
               
chr3:9663317-9662970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
118, 15
               

               
Conread position:
               
797-1148
               

               
Cow position:
               
chr3:59604700-59605043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 58
               

               
Conread position:
               
801-1117
               

               
Cow position:
               
chr3:71238329-71238646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
80, 13
               

               
Conread position:
               
811-999
               

               
Cow position:
               
chr3:34937708-34937901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
811-1119
               

               
Cow position:
               
chr3:61169657-61169982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
17, 143
               

               
Conread position:
               
811-1126
               

               
Cow position:
               
chr3:48362939-48363248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
9, 91
               

               
Conread position:
               
812-1005
               

               
Cow position:
               
chr3:56511-56314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
113, 84
               

               
Conread position:
               
813-1085
               

               
Cow position:
               
chr3:26981933-26982196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
96, 61
               

               
Conread position:
               
813-1130
               

               
Cow position:
               
chr3:56476547-56476855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
59, 43
               

               
Conread position:
               
813-1132
               

               
Cow position:
               
chr3:51234229-51233919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
112, 197
               

               
Conread position:
               
813-1145
               

               
Cow position:
               
chr3:38828635-38828949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
814-1152
               

               
Cow position:
               
chr3:59034905-59035246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
109, 226
               

               
Conread position:
               
815-1122
               

               
Cow position:
               
chr3:68708135-68707847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
130, 71
               

               
Conread position:
               
816-936
               

               
Cow position:
               
chr3:34294415-34294292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
816-987
               

               
Cow position:
               
chr3:15057737-15057575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
155, 15
               

               
Conread position:
               
816-996
               

               
Cow position:
               
chr3:5097076-5097261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
95, 78
               

               
Conread position:
               
816-996
               

               
Cow position:
               
chr3:78896519-78896701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
109, 41
               

               
Conread position:
               
816-998
               

               
Cow position:
               
chr3:39171613-39171430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
56, 108
               

               
Conread position:
               
816-1000
               

               
Cow position:
               
chr3:66609973-66609786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
120, 82
               

               
Conread position:
               
816-1010
               

               
Cow position:
               
chr3:7940686-7940489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
71, 107
               

               
Conread position:
               
816-1017
               

               
Cow position:
               
chr3:58969030-58968828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
123, 56
               

               
Conread position:
               
816-1017
               

               
Cow position:
               
chr3:59101699-59101902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
93, 112
               

               
Conread position:
               
816-1020
               

               
Cow position:
               
chr3:45534426-45534218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
78, 27
               

               
Conread position:
               
816-1023
               

               
Cow position:
               
chr3:55109747-55109532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
816-1026
               

               
Cow position:
               
chr3:26065873-26066085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
93, 112
               

               
Conread position:
               
816-1026
               

               
Cow position:
               
chr3:59799117-59799332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
122, 81
               

               
Conread position:
               
816-1026
               

               
Cow position:
               
chr3:73915934-73915724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
14, 84
               

               
Conread position:
               
816-1026
               

               
Cow position:
               
chr3:74584087-74584291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
125, 41
               

               
Conread position:
               
816-1030
               

               
Cow position:
               
chr3:10347225-10347443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
125, 78
               

               
Conread position:
               
816-1030
               

               
Cow position:
               
chr3:83815920-83815700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
68, 82
               

               
Conread position:
               
816-1032
               

               
Cow position:
               
chr3:55272177-55271955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
816-1032
               

               
Cow position:
               
chr3:62826749-62826529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
91, 83
               

               
Conread position:
               
816-1033
               

               
Cow position:
               
chr3:28908332-28908112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
119, 26
               

               
Conread position:
               
816-1033
               

               
Cow position:
               
chr3:66292307-66292086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
71, 54
               

               
Conread position:
               
816-1037
               

               
Cow position:
               
chr3:69750832-69750617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
207, 67
               

               
Conread position:
               
816-1041
               

               
Cow position:
               
chr3:49327811-49328045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
816-1042
               

               
Cow position:
               
chr3:4050064-4050291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
60, 81
               

               
Conread position:
               
816-1045
               

               
Cow position:
               
chr3:60265372-60265151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
24, 74
               

               
Conread position:
               
816-1046
               

               
Cow position:
               
chr3:54945998-54946235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
816-1046
               

               
Cow position:
               
chr3:57624335-57624566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
109, 10
               

               
Conread position:
               
816-1047
               

               
Cow position:
               
chr3:55835955-55835717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
53, 218
               

               
Conread position:
               
816-1048
               

               
Cow position:
               
chr3:67704412-67704652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
816-1052
               

               
Cow position:
               
chr3:12712048-12711805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
816-1053
               

               
Cow position:
               
chr3:20677965-20677733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
129, 69
               

               
Conread position:
               
816-1053
               

               
Cow position:
               
chr3:59621775-59621539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
119, 28
               

               
Conread position:
               
816-1054
               

               
Cow position:
               
chr3:81371517-81371759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
77, 26
               

               
Conread position:
               
816-1055
               

               
Cow position:
               
chr3:13507336-13507583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
82, 28
               

               
Conread position:
               
816-1055
               

               
Cow position:
               
chr3:15506321-15506564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
85, 40
               

               
Conread position:
               
816-1055
               

               
Cow position:
               
chr3:17447739-17447502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
108, 48
               

               
Conread position:
               
816-1055
               

               
Cow position:
               
chr3:53508491-53508722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
123, 40
               

               
Conread position:
               
816-1055
               

               
Cow position:
               
chr3:70899765-70900003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
125, 21
               

               
Conread position:
               
816-1055
               

               
Cow position:
               
chr3:80581534-80581768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
816-1055
               

               
Cow position:
               
chr3:84175956-84175711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
67, 84
               

               
Conread position:
               
816-1063
               

               
Cow position:
               
chr3:73443217-73442977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
126, 58
               

               
Conread position:
               
816-1074
               

               
Cow position:
               
chr3:79220724-79220988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
70, 120
               

               
Conread position:
               
816-1075
               

               
Cow position:
               
chr3:73708918-73709175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
95, 27
               

               
Conread position:
               
816-1076
               

               
Cow position:
               
chr3:6689871-6690132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
55, 66
               

               
Conread position:
               
816-1085
               

               
Cow position:
               
chr3:15751851-15751576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
84, 202
               

               
Conread position:
               
816-1085
               

               
Cow position:
               
chr3:38783486-38783746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
816-1092
               

               
Cow position:
               
chr3:73820500-73820217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
65, 44
               

               
Conread position:
               
816-1093
               

               
Cow position:
               
chr3:44101841-44102113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
111, 78
               

               
Conread position:
               
816-1093
               

               
Cow position:
               
chr3:72390955-72391234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
99, 72
               

               
Conread position:
               
816-1096
               

               
Cow position:
               
chr3:13890345-13890629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
75, 84
               

               
Conread position:
               
816-1096
               

               
Cow position:
               
chr3:25944954-25945244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
75, 64
               

               
Conread position:
               
816-1096
               

               
Cow position:
               
chr3:52608057-52608330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
76, 33
               

               
Conread position:
               
816-1096
               

               
Cow position:
               
chr3:55434200-55434480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
69, 117
               

               
Conread position:
               
816-1099
               

               
Cow position:
               
chr3:39661580-39661302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
67, 37
               

               
Conread position:
               
816-1099
               

               
Cow position:
               
chr3:53592824-53592534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
66, 220
               

               
Conread position:
               
816-1107
               

               
Cow position:
               
chr3:11987198-11987488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
109, 82
               

               
Conread position:
               
816-1107
               

               
Cow position:
               
chr3:74079769-74079478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 157
               

               
Conread position:
               
816-1108
               

               
Cow position:
               
chr3:25754896-25755196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
154, 30
               

               
Conread position:
               
816-1108
               

               
Cow position:
               
chr3:48241486-48241768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
60, 127
               

               
Conread position:
               
816-1108
               

               
Cow position:
               
chr3:53046787-53046497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
67, 38
               

               
Conread position:
               
816-1108
               

               
Cow position:
               
chr3:57754607-57754314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
109, 51
               

               
Conread position:
               
816-1108
               

               
Cow position:
               
chr3:66900866-66900566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
69, 38
               

               
Conread position:
               
816-1108
               

               
Cow position:
               
chr3:79196629-79196924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
79, 46
               

               
Conread position:
               
816-1109
               

               
Cow position:
               
chr3:70334825-70334530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
124, 73
               

               
Conread position:
               
816-1117
               

               
Cow position:
               
chr3:45647550-45647836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
79, 27
               

               
Conread position:
               
816-1117
               

               
Cow position:
               
chr3:54903445-54903737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
74, 85
               

               
Conread position:
               
816-1118
               

               
Cow position:
               
chr3:59610851-59610548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
82, 55
               

               
Conread position:
               
816-1118
               

               
Cow position:
               
chr3:68616455-68616164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
75, 26
               

               
Conread position:
               
816-1119
               

               
Cow position:
               
chr3:17222274-17221961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
80, 33
               

               
Conread position:
               
816-1119
               

               
Cow position:
               
chr3:26970697-26970983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
816-1119
               

               
Cow position:
               
chr3:53150198-53150505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
127, 71
               

               
Conread position:
               
816-1119
               

               
Cow position:
               
chr3:64010953-64010636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
90, 212
               

               
Conread position:
               
816-1122
               

               
Cow position:
               
chr3:44932382-44932687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 172
               

               
Conread position:
               
816-1122
               

               
Cow position:
               
chr3:68881242-68880956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
129, 70
               

               
Conread position:
               
816-1122
               

               
Cow position:
               
chr3:70609496-70609800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 30
               

               
Conread position:
               
816-1122
               

               
Cow position:
               
chr3:73394991-73395290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
65, 80
               

               
Conread position:
               
816-1123
               

               
Cow position:
               
chr3:3556421-3556725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
24, 80
               

               
Conread position:
               
816-1123
               

               
Cow position:
               
chr3:9641435-9641731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
124, 207
               

               
Conread position:
               
816-1123
               

               
Cow position:
               
chr3:17235339-17235028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
65, 17
               

               
Conread position:
               
816-1123
               

               
Cow position:
               
chr3:17331596-17331895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 143
               

               
Conread position:
               
816-1123
               

               
Cow position:
               
chr3:49482837-49482537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
304, 65
               

               
Conread position:
               
816-1124
               

               
Cow position:
               
chr3:8060997-8061297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
71, 57
               

               
Conread position:
               
816-1125
               

               
Cow position:
               
chr3:3985197-3985494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
64, 79
               

               
Conread position:
               
816-1125
               

               
Cow position:
               
chr3:7661722-7662035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
57, 82
               

               
Conread position:
               
816-1125
               

               
Cow position:
               
chr3:13353231-13353542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 147
               

               
Conread position:
               
816-1125
               

               
Cow position:
               
chr3:15052082-15051774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
65, 148
               

               
Conread position:
               
816-1125
               

               
Cow position:
               
chr3:17957335-17957639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
124, 191
               

               
Conread position:
               
816-1125
               

               
Cow position:
               
chr3:18686777-18687079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
129, 82
               

               
Conread position:
               
816-1125
               

               
Cow position:
               
chr3:48900468-48900152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
67, 22
               

               
Conread position:
               
816-1125
               

               
Cow position:
               
chr3:58765209-58764908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
77, 193
               

               
Conread position:
               
816-1125
               

               
Cow position:
               
chr3:59473990-59474298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
64, 35
               

               
Conread position:
               
816-1125
               

               
Cow position:
               
chr3:59597053-59597354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
65, 87
               

               
Conread position:
               
816-1125
               

               
Cow position:
               
chr3:62789310-62788978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
70, 295
               

               
Conread position:
               
816-1125
               

               
Cow position:
               
chr3:65413410-65413093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
59, 83
               

               
Conread position:
               
816-1125
               

               
Cow position:
               
chr3:67520302-67519998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
67, 200
               

               
Conread position:
               
816-1125
               

               
Cow position:
               
chr3:76268109-76267796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
69, 219
               

               
Conread position:
               
816-1125
               

               
Cow position:
               
chr3:76713454-76713134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
58, 84
               

               
Conread position:
               
816-1125
               

               
Cow position:
               
chr3:78077063-78077368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 26
               

               
Conread position:
               
816-1127
               

               
Cow position:
               
chr3:5044933-5044631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
199, 70
               

               
Conread position:
               
816-1127
               

               
Cow position:
               
chr3:11254289-11253986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
115, 65
               

               
Conread position:
               
816-1127
               

               
Cow position:
               
chr3:15153562-15153867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
73, 9
               

               
Conread position:
               
816-1127
               

               
Cow position:
               
chr3:48852091-48851788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
816-1130
               

               
Cow position:
               
chr3:23920559-23920244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
66, 82
               

               
Conread position:
               
816-1130
               

               
Cow position:
               
chr3:70762253-70761940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
87, 63
               

               
Conread position:
               
816-1133
               

               
Cow position:
               
chr3:210187-210510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
44, 30
               

               
Conread position:
               
816-1133
               

               
Cow position:
               
chr3:7331243-7330953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
129, 65
               

               
Conread position:
               
816-1133
               

               
Cow position:
               
chr3:10958373-10958061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
75, 184
               

               
Conread position:
               
816-1133
               

               
Cow position:
               
chr3:14552748-14553057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
109, 30
               

               
Conread position:
               
816-1133
               

               
Cow position:
               
chr3:15158911-15159216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
24, 72
               

               
Conread position:
               
816-1133
               

               
Cow position:
               
chr3:19585731-19586051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 147
               

               
Conread position:
               
816-1133
               

               
Cow position:
               
chr3:24468509-24468199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
124, 92
               

               
Conread position:
               
816-1133
               

               
Cow position:
               
chr3:30179951-30180271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
71, 220
               

               
Conread position:
               
816-1133
               

               
Cow position:
               
chr3:31309484-31309170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
66, 55
               

               
Conread position:
               
816-1133
               

               
Cow position:
               
chr3:53221884-53222198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 46
               

               
Conread position:
               
816-1133
               

               
Cow position:
               
chr3:54373989-54373674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
91, 71
               

               
Conread position:
               
816-1133
               

               
Cow position:
               
chr3:57764097-57764399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
129, 70
               

               
Conread position:
               
816-1133
               

               
Cow position:
               
chr3:60264846-60264535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 30
               

               
Conread position:
               
816-1133
               

               
Cow position:
               
chr3:72342114-72342432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
69, 79
               

               
Conread position:
               
816-1133
               

               
Cow position:
               
chr3:78093514-78093210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
126, 72
               

               
Conread position:
               
816-1134
               

               
Cow position:
               
chr3:2506606-2506288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
66, 85
               

               
Conread position:
               
816-1134
               

               
Cow position:
               
chr3:55177881-55177564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 103
               

               
Conread position:
               
816-1134
               

               
Cow position:
               
chr3:75479872-75480186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
66, 34
               

               
Conread position:
               
816-1137
               

               
Cow position:
               
chr3:23105496-23105175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
76, 225
               

               
Conread position:
               
816-1137
               

               
Cow position:
               
chr3:23169196-23168876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
82, 35
               

               
Conread position:
               
816-1137
               

               
Cow position:
               
chr3:29813114-29813418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
66, 84
               

               
Conread position:
               
816-1137
               

               
Cow position:
               
chr3:32585023-32585342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
127, 32
               

               
Conread position:
               
816-1137
               

               
Cow position:
               
chr3:43233378-43233692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
96, 58
               

               
Conread position:
               
816-1137
               

               
Cow position:
               
chr3:53790667-53790351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
125, 106
               

               
Conread position:
               
816-1138
               

               
Cow position:
               
chr3:75687568-75687246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
95, 78
               

               
Conread position:
               
816-1139
               

               
Cow position:
               
chr3:18393518-18393210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
70, 53
               

               
Conread position:
               
816-1139
               

               
Cow position:
               
chr3:39969998-39969674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 228
               

               
Conread position:
               
816-1139
               

               
Cow position:
               
chr3:62046532-62046864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
80, 30
               

               
Conread position:
               
816-1140
               

               
Cow position:
               
chr3:27274401-27274720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
126, 17
               

               
Conread position:
               
816-1140
               

               
Cow position:
               
chr3:68648035-68648369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
66, 253
               

               
Conread position:
               
816-1141
               

               
Cow position:
               
chr3:63269092-63269422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
67, 79
               

               
Conread position:
               
816-1141
               

               
Cow position:
               
chr3:67930313-67929978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
129, 82
               

               
Conread position:
               
816-1142
               

               
Cow position:
               
chr3:174817-175137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
91, 71
               

               
Conread position:
               
816-1142
               

               
Cow position:
               
chr3:53909986-53910299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
99, 10
               

               
Conread position:
               
816-1142
               

               
Cow position:
               
chr3:55319032-55318701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
70, 10
               

               
Conread position:
               
816-1142
               

               
Cow position:
               
chr3:76155857-76156181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
127, 82
               

               
Conread position:
               
816-1143
               

               
Cow position:
               
chr3:76922793-76922480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
69, 217
               

               
Conread position:
               
816-1143
               

               
Cow position:
               
chr3:80071996-80072341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
74, 279
               

               
Conread position:
               
816-1144
               

               
Cow position:
               
chr3:38863985-38864317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
75, 228
               

               
Conread position:
               
816-1144
               

               
Cow position:
               
chr3:73237064-73237379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
74, 28
               

               
Conread position:
               
816-1145
               

               
Cow position:
               
chr3:13301978-13301648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
74, 114
               

               
Conread position:
               
816-1145
               

               
Cow position:
               
chr3:31298283-31297959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
116, 92
               

               
Conread position:
               
816-1145
               

               
Cow position:
               
chr3:47417696-47417373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
68, 104
               

               
Conread position:
               
816-1145
               

               
Cow position:
               
chr3:53318274-53318608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
111, 92
               

               
Conread position:
               
816-1145
               

               
Cow position:
               
chr3:68586890-68587214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
65, 147
               

               
Conread position:
               
816-1145
               

               
Cow position:
               
chr3:75158229-75158548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
66, 170
               

               
Conread position:
               
816-1145
               

               
Cow position:
               
chr3:77271404-77271084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
65, 112
               

               
Conread position:
               
816-1146
               

               
Cow position:
               
chr3:27697107-27696767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
103, 79
               

               
Conread position:
               
816-1147
               

               
Cow position:
               
chr3:30940685-30941004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
66, 10
               

               
Conread position:
               
816-1149
               

               
Cow position:
               
chr3:64526717-64527046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
111, 192
               

               
Conread position:
               
816-1150
               

               
Cow position:
               
chr3:2025056-2025407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
67, 46
               

               
Conread position:
               
816-1150
               

               
Cow position:
               
chr3:15954217-15953882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
103, 197
               

               
Conread position:
               
816-1150
               

               
Cow position:
               
chr3:18426830-18426495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
75, 90
               

               
Conread position:
               
816-1150
               

               
Cow position:
               
chr3:26739547-26739223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
68, 127
               

               
Conread position:
               
816-1150
               

               
Cow position:
               
chr3:31419572-31419899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
304, 73
               

               
Conread position:
               
816-1150
               

               
Cow position:
               
chr3:65236895-65237222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
124, 62
               

               
Conread position:
               
816-1150
               

               
Cow position:
               
chr3:67698149-67698479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
70, 6
               

               
Conread position:
               
816-1150
               

               
Cow position:
               
chr3:81039875-81039542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
125, 69
               

               
Conread position:
               
816-1151
               

               
Cow position:
               
chr3:2674898-2675235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
127, 78
               

               
Conread position:
               
816-1152
               

               
Cow position:
               
chr3:2396909-2396590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
816-1152
               

               
Cow position:
               
chr3:12705676-12705344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 200
               

               
Conread position:
               
816-1152
               

               
Cow position:
               
chr3:55970376-55970721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
95, 71
               

               
Conread position:
               
816-1152
               

               
Cow position:
               
chr3:70565868-70565526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 71
               

               
Conread position:
               
816-1152
               

               
Cow position:
               
chr3:72473782-72474124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
72, 196
               

               
Conread position:
               
816-1152
               

               
Cow position:
               
chr3:75080640-75080957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
129, 27
               

               
Conread position:
               
816-1152
               

               
Cow position:
               
chr3:77581979-77582312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
66, 81
               

               
Conread position:
               
817-1004
               

               
Cow position:
               
chr3:75711182-75711368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
74, 91
               

               
Conread position:
               
817-1046
               

               
Cow position:
               
chr3:24935241-24935468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
92, 61
               

               
Conread position:
               
817-1052
               

               
Cow position:
               
chr3:73460840-73461074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
84, 25
               

               
Conread position:
               
817-1054
               

               
Cow position:
               
chr3:45648003-45648243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
817-1055
               

               
Cow position:
               
chr3:50069635-50069876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
84, 46
               

               
Conread position:
               
817-1062
               

               
Cow position:
               
chr3:5366641-5366890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
98, 72
               

               
Conread position:
               
817-1074
               

               
Cow position:
               
chr3:2630665-2630890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
817-1083
               

               
Cow position:
               
chr3:80564834-80565100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
74, 107
               

               
Conread position:
               
817-1095
               

               
Cow position:
               
chr3:53095062-53094780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
105, 133
               

               
Conread position:
               
817-1109
               

               
Cow position:
               
chr3:80053668-80053378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
89, 113
               

               
Conread position:
               
817-1124
               

               
Cow position:
               
chr3:1517643-1517335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
21, 56
               

               
Conread position:
               
817-1124
               

               
Cow position:
               
chr3:64281061-64280761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
119, 72
               

               
Conread position:
               
817-1125
               

               
Cow position:
               
chr3:16333672-16333982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
91, 15
               

               
Conread position:
               
817-1125
               

               
Cow position:
               
chr3:54100850-54100535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
64, 91
               

               
Conread position:
               
817-1125
               

               
Cow position:
               
chr3:70334093-70333791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
109, 82
               

               
Conread position:
               
817-1125
               

               
Cow position:
               
chr3:77365427-77365114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
64, 228
               

               
Conread position:
               
817-1126
               

               
Cow position:
               
chr3:83455279-83454973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
63, 37
               

               
Conread position:
               
817-1133
               

               
Cow position:
               
chr3:45183965-45183636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
44, 307
               

               
Conread position:
               
817-1133
               

               
Cow position:
               
chr3:83787307-83787630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
89, 196
               

               
Conread position:
               
817-1134
               

               
Cow position:
               
chr3:33253006-33252705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
55, 64
               

               
Conread position:
               
817-1138
               

               
Cow position:
               
chr3:51402779-51403087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
271, 117
               

               
Conread position:
               
817-1146
               

               
Cow position:
               
chr3:22232781-22232467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
68, 55
               

               
Conread position:
               
817-1148
               

               
Cow position:
               
chr3:35056108-35055777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
98, 82
               

               
Conread position:
               
817-1148
               

               
Cow position:
               
chr3:68145971-68145653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
94, 60
               

               
Conread position:
               
818-1051
               

               
Cow position:
               
chr3:48296581-48296807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
116, 80
               

               
Conread position:
               
818-1051
               

               
Cow position:
               
chr3:56059678-56059918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
24, 219
               

               
Conread position:
               
818-1056
               

               
Cow position:
               
chr3:74242867-74243104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
72, 28
               

               
Conread position:
               
818-1119
               

               
Cow position:
               
chr3:17058669-17058375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
122, 69
               

               
Conread position:
               
818-1123
               

               
Cow position:
               
chr3:1785370-1785048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
117, 36
               

               
Conread position:
               
818-1125
               

               
Cow position:
               
chr3:79884610-79884302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
107, 64
               

               
Conread position:
               
818-1129
               

               
Cow position:
               
chr3:23408480-23408182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
125, 68
               

               
Conread position:
               
818-1133
               

               
Cow position:
               
chr3:83474617-83474940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
74, 31
               

               
Conread position:
               
818-1141
               

               
Cow position:
               
chr3:65058575-65058892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
93, 24
               

               
Conread position:
               
818-1146
               

               
Cow position:
               
chr3:53270701-53271032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
93, 80
               

               
Conread position:
               
818-1151
               

               
Cow position:
               
chr3:53739314-53738979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
121, 80
               

               
Conread position:
               
819-1055
               

               
Cow position:
               
chr3:67543995-67543755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
115, 70
               

               
Conread position:
               
819-1092
               

               
Cow position:
               
chr3:15388089-15388367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
96, 30
               

               
Conread position:
               
819-1092
               

               
Cow position:
               
chr3:29891539-29891261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
70, 193
               

               
Conread position:
               
819-1095
               

               
Cow position:
               
chr3:29946268-29946537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
113, 87
               

               
Conread position:
               
819-1096
               

               
Cow position:
               
chr3:74600984-74601261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
66, 182
               

               
Conread position:
               
819-1107
               

               
Cow position:
               
chr3:69416910-69416618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
65, 79
               

               
Conread position:
               
819-1109
               

               
Cow position:
               
chr3:56612233-56612524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
90, 70
               

               
Conread position:
               
819-1125
               

               
Cow position:
               
chr3:22221193-22221504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
64, 7
               

               
Conread position:
               
819-1133
               

               
Cow position:
               
chr3:5696857-5696543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
65, 82
               

               
Conread position:
               
819-1133
               

               
Cow position:
               
chr3:36570172-36569851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
92, 33
               

               
Conread position:
               
819-1133
               

               
Cow position:
               
chr3:71231271-71231587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
120, 78
               

               
Conread position:
               
819-1136
               

               
Cow position:
               
chr3:71478465-71478782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
72, 196
               

               
Conread position:
               
819-1137
               

               
Cow position:
               
chr3:20663660-20663353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
191, 77
               

               
Conread position:
               
819-1141
               

               
Cow position:
               
chr3:53210148-53209813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
92, 68
               

               
Conread position:
               
819-1143
               

               
Cow position:
               
chr3:49678999-49679332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
21, 84
               

               
Conread position:
               
819-1145
               

               
Cow position:
               
chr3:6299342-6299654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
819-1152
               

               
Cow position:
               
chr3:51033243-51033577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
96, 48
               

               
Conread position:
               
820-1053
               

               
Cow position:
               
chr3:35621176-35621411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
61, 104
               

               
Conread position:
               
820-1121
               

               
Cow position:
               
chr3:3883945-3883646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
68, 81
               

               
Conread position:
               
820-1133
               

               
Cow position:
               
chr3:18059575-18059893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
115, 52
               

               
Conread position:
               
820-1144
               

               
Cow position:
               
chr3:21015087-21014765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
64, 78
               

               
Conread position:
               
820-1145
               

               
Cow position:
               
chr3:58134814-58134487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
109, 193
               

               
Conread position:
               
820-1147
               

               
Cow position:
               
chr3:61224869-61224550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
82, 38
               

               
Conread position:
               
821-1125
               

               
Cow position:
               
chr3:24852710-24852411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
255, 31
               

               
Conread position:
               
821-1129
               

               
Cow position:
               
chr3:15752760-15752440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
55, 120
               

               
Conread position:
               
822-991
               

               
Cow position:
               
chr3:65800467-65800634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
63, 52
               

               
Conread position:
               
822-1108
               

               
Cow position:
               
chr3:59000876-59000602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
89, 48
               

               
Conread position:
               
822-1121
               

               
Cow position:
               
chr3:68156610-68156901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
148, 72
               

               
Conread position:
               
822-1125
               

               
Cow position:
               
chr3:57273941-57274237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
114, 49
               

               
Conread position:
               
822-1133
               

               
Cow position:
               
chr3:37041290-37041601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
59, 214
               

               
Conread position:
               
822-1149
               

               
Cow position:
               
chr3:55189881-55189552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 197
               

               
Conread position:
               
823-1142
               

               
Cow position:
               
chr3:45667470-45667149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
7, 75
               

               
Conread position:
               
823-1145
               

               
Cow position:
               
chr3:48468059-48468371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
59, 95
               

               
Conread position:
               
826-1043
               

               
Cow position:
               
chr3:3738367-3738580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
117, 54
               

               
Conread position:
               
826-1124
               

               
Cow position:
               
chr3:2393083-2392792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
154, 72
               

               
Conread position:
               
826-1124
               

               
Cow position:
               
chr3:80740443-80740730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
49, 107
               

               
Conread position:
               
826-1125
               

               
Cow position:
               
chr3:45700686-45700980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
87, 68
               

               
Conread position:
               
826-1147
               

               
Cow position:
               
chr3:2518652-2518341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
115, 81
               

               
Conread position:
               
826-1148
               

               
Cow position:
               
chr3:26992446-26992771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
69, 189
               

               
Conread position:
               
827-1133
               

               
Cow position:
               
chr3:15951031-15950733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
111, 68
               

               
Conread position:
               
829-1149
               

               
Cow position:
               
chr3:69785741-69785420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 22
               

               
Conread position:
               
830-1046
               

               
Cow position:
               
chr3:63177362-63177586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
63, 201
               

               
Conread position:
               
830-1055
               

               
Cow position:
               
chr3:6520090-6519854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
30, 14
               

               
Conread position:
               
830-1123
               

               
Cow position:
               
chr3:58318070-58317767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
53, 81
               

               
Conread position:
               
830-1125
               

               
Cow position:
               
chr3:48072994-48072708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
115, 30
               

               
Conread position:
               
830-1130
               

               
Cow position:
               
chr3:15443846-15443544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
118, 188
               

               
Conread position:
               
830-1149
               

               
Cow position:
               
chr3:3656394-3656720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
10, 68
               

               
Conread position:
               
830-1149
               

               
Cow position:
               
chr3:32787343-32787661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
89, 51
               

               
Conread position:
               
830-1149
               

               
Cow position:
               
chr3:41129604-41129915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
30, 36
               

               
Conread position:
               
830-1152
               

               
Cow position:
               
chr3:78945951-78945617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
53, 103
               

               
Conread position:
               
831-1019
               

               
Cow position:
               
chr3:26219167-26218974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
110, 65
               

               
Conread position:
               
834-1005
               

               
Cow position:
               
chr3:12670726-12670552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
56, 12
               

               
Conread position:
               
834-1147
               

               
Cow position:
               
chr3:22668302-22668610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
78, 94
               

               
Conread position:
               
837-1121
               

               
Cow position:
               
chr3:73837826-73837544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
75, 49
               

               
Conread position:
               
838-1024
               

               
Cow position:
               
chr3:74533240-74533431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
107, 60
               

               
Conread position:
               
839-1033
               

               
Cow position:
               
chr3:116085-116281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
45, 57
               

               
Conread position:
               
839-1056
               

               
Cow position:
               
chr3:15172971-15173195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
45, 17
               

               
Conread position:
               
839-1095
               

               
Cow position:
               
chr3:74134592-74134855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
72, 197
               

               
Conread position:
               
839-1113
               

               
Cow position:
               
chr3:68627794-68627522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
52, 73
               

               
Conread position:
               
839-1123
               

               
Cow position:
               
chr3:45211187-45211481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
56, 39
               

               
Conread position:
               
839-1125
               

               
Cow position:
               
chr3:26681911-26681636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 98
               

               
Conread position:
               
839-1133
               

               
Cow position:
               
chr3:7763549-7763843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
76, 48
               

               
Conread position:
               
839-1133
               

               
Cow position:
               
chr3:17695112-17694814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
43, 172
               

               
Conread position:
               
839-1141
               

               
Cow position:
               
chr3:30009021-30008708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
46, 178
               

               
Conread position:
               
839-1150
               

               
Cow position:
               
chr3:54050133-54049823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
93, 27
               

               
Conread position:
               
840-1083
               

               
Cow position:
               
chr3:32409104-32409356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
840-1123
               

               
Cow position:
               
chr3:31361312-31361599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
55, 7
               

               
Conread position:
               
840-1124
               

               
Cow position:
               
chr3:1036919-1037205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 91
               

               
Conread position:
               
840-1125
               

               
Cow position:
               
chr3:45881797-45882077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
46, 68
               

               
Conread position:
               
840-1126
               

               
Cow position:
               
chr3:7337886-7337608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
55, 9
               

               
Conread position:
               
840-1126
               

               
Cow position:
               
chr3:16752366-16752075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
100, 124
               

               
Conread position:
               
840-1127
               

               
Cow position:
               
chr3:9116921-9117214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
99, 39
               

               
Conread position:
               
840-1130
               

               
Cow position:
               
chr3:54506597-54506889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
57, 195
               

               
Conread position:
               
840-1146
               

               
Cow position:
               
chr3:74234084-74234381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
56, 77
               

               
Conread position:
               
840-1151
               

               
Cow position:
               
chr3:78092620-78092308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
55, 169
               

               
Conread position:
               
841-1121
               

               
Cow position:
               
chr3:22676202-22675933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
56, 21
               

               
Conread position:
               
841-1122
               

               
Cow position:
               
chr3:17936946-17936672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
49, 33
               

               
Conread position:
               
841-1143
               

               
Cow position:
               
chr3:3316918-3316610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
101, 48
               

               
Conread position:
               
841-1144
               

               
Cow position:
               
chr3:22165523-22165220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
55, 46
               

               
Conread position:
               
841-1147
               

               
Cow position:
               
chr3:52652187-52651880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
104, 53
               

               
Conread position:
               
842-1152
               

               
Cow position:
               
chr3:82019947-82019635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
43, 193
               

               
Conread position:
               
844-1076
               

               
Cow position:
               
chr3:19626612-19626378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
46, 149
               

               
Conread position:
               
844-1123
               

               
Cow position:
               
chr3:17456370-17456091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
81, 43
               

               
Conread position:
               
848-1037
               

               
Cow position:
               
chr3:64135616-64135813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
849-997
               

               
Cow position:
               
chr3:54030181-54030336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
849-1132
               

               
Cow position:
               
chr3:75608399-75608673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
43, 176
               

               
Conread position:
               
849-1144
               

               
Cow position:
               
chr3:47753126-47753434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
850-1031
               

               
Cow position:
               
chr3:3471941-3472129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
43, 74
               

               
Conread position:
               
850-1109
               

               
Cow position:
               
chr3:18607565-18607825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
42, 196
               

               
Conread position:
               
850-1130
               

               
Cow position:
               
chr3:6182310-6182049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
112, 41
               

               
Conread position:
               
852-1133
               

               
Cow position:
               
chr3:4548920-4549203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 192
               

               
Conread position:
               
852-1145
               

               
Cow position:
               
chr3:49363020-49363303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
93, 19
               

               
Conread position:
               
855-1148
               

               
Cow position:
               
chr3:81087724-81087440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
105, 48
               

               
Conread position:
               
857-1122
               

               
Cow position:
               
chr3:71474498-71474232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
27, 163
               

               
Conread position:
               
858-1055
               

               
Cow position:
               
chr3:44330527-44330326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
81, 175
               

               
Conread position:
               
858-1107
               

               
Cow position:
               
chr3:31350194-31349948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
85, 164
               

               
Conread position:
               
859-1004
               

               
Cow position:
               
chr3:478888-478738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
30, 105
               

               
Conread position:
               
860-1127
               

               
Cow position:
               
chr3:22716388-22716096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
860-1134
               

               
Cow position:
               
chr3:19682605-19682894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
862-1142
               

               
Cow position:
               
chr3:64196739-64197023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
28, 178
               

               
Conread position:
               
864-1117
               

               
Cow position:
               
chr3:10668962-10668709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
81, 34
               

               
Conread position:
               
865-1056
               

               
Cow position:
               
chr3:4480858-4481054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
27, 175
               

               
Conread position:
               
866-1125
               

               
Cow position:
               
chr3:76269816-76270066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
29, 51
               

               
Conread position:
               
867-1108
               

               
Cow position:
               
chr3:40145387-40145628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
30, 43
               

               
Conread position:
               
879-1125
               

               
Cow position:
               
chr3:5040366-5040125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
145, 26
               

               
Conread position:
               
884-1147
               

               
Cow position:
               
chr3:53428979-53428717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
38, 154
               

               
Conread position:
               
886-1138
               

               
Cow position:
               
chr3:49344631-49344884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
39, 161
               

               
Conread position:
               
888-1133
               

               
Cow position:
               
chr3:68303255-68303504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
17, 154
               

               
Conread position:
               
889-1133
               

               
Cow position:
               
chr3:23132227-23131983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
893-1055
               

               
Cow position:
               
chr3:82629261-82629426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
47, 132
               

               
Conread position:
               
896-1133
               

               
Cow position:
               
chr3:9120793-9121025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
49, 134
               

               
Conread position:
               
897-1130
               

               
Cow position:
               
chr3:53084039-53083802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
42, 168
               

               
Conread position:
               
899-1130
               

               
Cow position:
               
chr3:59919983-59920225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
901-1108
               

               
Cow position:
               
chr3:26603602-26603385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
912-1125
               

               
Cow position:
               
chr3:76415932-76415705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
101, 17
               

               
Conread position:
               
918-1133
               

               
Cow position:
               
chr3:8523180-8522967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
26, 86
               

               
Conread position:
               
932-1138
               

               
Cow position:
               
chr3:4071779-4071578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
936-1148
               

               
Cow position:
               
chr3:21959653-21959866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
101, 93
               

               
Conread position:
               
938-1136
               

               
Cow position:
               
chr3:11023440-11023643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
79, 67
               

               
Conread position:
               
940-1123
               

               
Cow position:
               
chr3:55730471-55730290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
70, 65
               

               
Conread position:
               
940-1125
               

               
Cow position:
               
chr3:5305796-5305981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
87, 153
               

               
Conread position:
               
940-1133
               

               
Cow position:
               
chr3:67407368-67407181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
940-1148
               

               
Cow position:
               
chr3:76168634-76168427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
77, 65
               

               
Conread position:
               
940-1152
               

               
Cow position:
               
chr3:78258757-78258544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
84, 65
               

               
Conread position:
               
941-1107
               

               
Cow position:
               
chr3:17531739-17531576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
86, 114
               

               
Conread position:
               
941-1124
               

               
Cow position:
               
chr3:52845555-52845732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
941-1130
               

               
Cow position:
               
chr3:22868721-22868533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
32, 118
               

               
Conread position:
               
942-1134
               

               
Cow position:
               
chr3:41510576-41510767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
43, 113
               

               
Conread position:
               
943-1144
               

               
Cow position:
               
chr3:75966780-75966586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
64, 13
               

               
Conread position:
               
945-1131
               

               
Cow position:
               
chr3:18471304-18471487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
70, 82
               

               
Conread position:
               
945-1133
               

               
Cow position:
               
chr3:43896057-43895877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
67, 75
               

               
Conread position:
               
946-1130
               

               
Cow position:
               
chr3:74050698-74050522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
178, 81
               

               
Conread position:
               
947-1151
               

               
Cow position:
               
chr3:24774658-24774848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
177, 65
               

               
Conread position:
               
948-1145
               

               
Cow position:
               
chr3:19611346-19611153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
178, 86
               

               
Conread position:
               
949-1135
               

               
Cow position:
               
chr3:25702335-25702142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
68, 57
               

               
Conread position:
               
951-1147
               

               
Cow position:
               
chr3:68624226-68624420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
169, 98
               

               
Conread position:
               
958-1130
               

               
Cow position:
               
chr3:19641074-19641248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
958-1133
               

               
Cow position:
               
chr3:3453595-3453767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
958-1136
               

               
Cow position:
               
chr3:2636965-2637137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
168, 77
               

               
Conread position:
               
958-1139
               

               
Cow position:
               
chr3:57641816-57641998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
165, 15
               

               
Conread position:
               
958-1141
               

               
Cow position:
               
chr3:44594637-44594815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
958-1143
               

               
Cow position:
               
chr3:44782355-44782535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
170, 65
               

               
Conread position:
               
958-1149
               

               
Cow position:
               
chr3:562778-562586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
68, 110
               

               
Conread position:
               
960-1133
               

               
Cow position:
               
chr3:77098805-77098640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
963-1147
               

               
Cow position:
               
chr3:22078096-22078277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               
Show alignments to all cow chromosomes.