Cow genome map

Conread name: Ss1.1-Pig4-TMW8026P06.3

Conread position: 737-1022
Cow position: chrX:11851826-11851548 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 193
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 78

Conread position: 763-1084
Cow position: chrX:4515553-4515878 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 230
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 118, 21

Conread position: 765-1127
Cow position: chrX:36355988-36356337 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 234
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 180, 45

Conread position: 773-1032
Cow position: chrX:41068604-41068866 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 181
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 108, 24

Conread position: 773-1043
Cow position: chrX:36515019-36514741 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 184
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 126

Conread position: 773-1054
Cow position: chrX:619123-618847 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 118, 36

Conread position: 773-1152
Cow position: chrX:8492952-8493324 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 244
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 33, 19

Conread position: 774-1046
Cow position: chrX:31311911-31312182 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 196
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 129, 41

Conread position: 794-1052
Cow position: chrX:38208640-38208382 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 181
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 125, 15

Conread position: 794-1127
Cow position: chrX:38560459-38560783 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 229
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 51, 19

Conread position: 796-1143
Cow position: chrX:48236720-48237066 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 227
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 100, 15

Conread position: 797-1054
Cow position: chrX:6690352-6690101 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 179
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 138, 18

Conread position: 797-1123
Cow position: chrX:27174900-27175230 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 227
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 62, 14

Conread position: 809-1063
Cow position: chrX:42235615-42235353 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 185
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 78, 229

Conread position: 811-1118
Cow position: chrX:41870978-41871281 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 222
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 9, 232

Conread position: 811-1128
Cow position: chrX:30338031-30337720 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 215
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 70, 97

Conread position: 813-1096
Cow position: chrX:12309468-12309183 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 189
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 96, 48

Conread position: 813-1111
Cow position: chrX:4768660-4768945 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 196
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 57, 39

Conread position: 813-1118
Cow position: chrX:38654513-38654208 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 212
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 73, 18

Conread position: 813-1133
Cow position: chrX:25035462-25035145 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 220
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 108, 84

Conread position: 813-1149
Cow position: chrX:1176062-1175736 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 223
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 102, 57

Conread position: 814-1123
Cow position: chrX:24331697-24332006 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 208
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 113, 82

Conread position: 816-941
Cow position: chrX:13785443-13785316 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 107
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 63, 0

Conread position: 816-946
Cow position: chrX:34990955-34991085 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 73, 36

Conread position: 816-983
Cow position: chrX:11856349-11856522 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 66, 34

Conread position: 816-1004
Cow position: chrX:7509062-7509252 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 129, 154

Conread position: 816-1004
Cow position: chrX:7571823-7572018 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 74, 0

Conread position: 816-1004
Cow position: chrX:21566323-21566520 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 816-1024
Cow position: chrX:11939007-11938801 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 124, 40

Conread position: 816-1025
Cow position: chrX:29120966-29121181 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 145
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 125, 0

Conread position: 816-1025
Cow position: chrX:42171376-42171163 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 67, 176

Conread position: 816-1026
Cow position: chrX:8925621-8925834 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 95, 83

Conread position: 816-1026
Cow position: chrX:35224216-35224432 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 123, 82

Conread position: 816-1026
Cow position: chrX:37232333-37232542 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 127, 68

Conread position: 816-1030
Cow position: chrX:39558430-39558210 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 65, 170

Conread position: 816-1030
Cow position: chrX:45414380-45414164 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 123, 78

Conread position: 816-1030
Cow position: chrX:45846019-45846241 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 77, 0

Conread position: 816-1031
Cow position: chrX:14973820-14973606 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 146
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 95, 78

Conread position: 816-1041
Cow position: chrX:41192628-41192852 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 168
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 80, 40

Conread position: 816-1047
Cow position: chrX:18273138-18272901 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 172
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 68, 0

Conread position: 816-1051
Cow position: chrX:24424468-24424245 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 73, 0

Conread position: 816-1051
Cow position: chrX:46433411-46433652 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 165
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 87

Conread position: 816-1054
Cow position: chrX:1503258-1503488 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 165
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 119, 36

Conread position: 816-1054
Cow position: chrX:6278580-6278333 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 164
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 816-1055
Cow position: chrX:5135605-5135358 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 180
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 78, 214

Conread position: 816-1055
Cow position: chrX:13382250-13382489 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 163
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 184, 127

Conread position: 816-1055
Cow position: chrX:18695004-18694770 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 161
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 123, 54

Conread position: 816-1055
Cow position: chrX:36067933-36068181 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 181
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 74, 0

Conread position: 816-1055
Cow position: chrX:43730298-43730060 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 170
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 120, 42

Conread position: 816-1056
Cow position: chrX:8797173-8797412 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 165
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 67, 129

Conread position: 816-1056
Cow position: chrX:38006844-38006605 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 177
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 122, 69

Conread position: 816-1063
Cow position: chrX:17725894-17726146 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 184
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 129, 214

Conread position: 816-1063
Cow position: chrX:41884494-41884242 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 179
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 76, 220

Conread position: 816-1085
Cow position: chrX:31252338-31252599 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 186
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 125, 73

Conread position: 816-1086
Cow position: chrX:34662927-34662654 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 181
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 75, 84

Conread position: 816-1095
Cow position: chrX:13868623-13868905 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 187
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 65, 84

Conread position: 816-1096
Cow position: chrX:44744894-44744620 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 185
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 94, 126

Conread position: 816-1096
Cow position: chrX:48183374-48183108 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 186
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 816-1099
Cow position: chrX:48010521-48010810 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 193
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 68, 199

Conread position: 816-1107
Cow position: chrX:1616124-1615845 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 203
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 83, 198

Conread position: 816-1108
Cow position: chrX:10831573-10831267 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 205
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 64, 205

Conread position: 816-1108
Cow position: chrX:27228048-27228343 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 196
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 65, 115

Conread position: 816-1108
Cow position: chrX:32820950-32821254 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 211
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 103, 73

Conread position: 816-1117
Cow position: chrX:40269408-40269731 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 238
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 75, 279

Conread position: 816-1119
Cow position: chrX:17794903-17795204 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 219
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 68, 33

Conread position: 816-1119
Cow position: chrX:21986372-21986076 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 217
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 79, 219

Conread position: 816-1119
Cow position: chrX:44396938-44397236 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 208
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 115, 81

Conread position: 816-1121
Cow position: chrX:23514095-23513779 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 218
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 127, 80

Conread position: 816-1122
Cow position: chrX:9201470-9201771 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 223
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 125, 78

Conread position: 816-1122
Cow position: chrX:20584244-20584540 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 223
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 75, 220

Conread position: 816-1122
Cow position: chrX:29544957-29544657 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 213
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 21, 73

Conread position: 816-1122
Cow position: chrX:38964024-38964325 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 212
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 199

Conread position: 816-1123
Cow position: chrX:4296899-4296594 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 208
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 93, 65

Conread position: 816-1123
Cow position: chrX:6413968-6414261 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 220
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 129, 65

Conread position: 816-1123
Cow position: chrX:13177545-13177255 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 217
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 27, 0

Conread position: 816-1123
Cow position: chrX:15231737-15231430 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 204
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 120, 33

Conread position: 816-1123
Cow position: chrX:18204541-18204237 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 205
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 73, 92

Conread position: 816-1123
Cow position: chrX:22387322-22387014 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 214
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 129, 69

Conread position: 816-1123
Cow position: chrX:33855313-33854997 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 226
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 67, 187

Conread position: 816-1123
Cow position: chrX:40557761-40557429 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 231
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 75, 0

Conread position: 816-1123
Cow position: chrX:42855375-42855691 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 211
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 76, 42

Conread position: 816-1124
Cow position: chrX:9252242-9251933 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 72

Conread position: 816-1124
Cow position: chrX:14884038-14883727 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 219

Conread position: 816-1124
Cow position: chrX:22812987-22813295 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 206
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 13, 44

Conread position: 816-1124
Cow position: chrX:27394100-27393788 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 221
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 119, 42

Conread position: 816-1124
Cow position: chrX:34376867-34377169 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 216
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 77, 21

Conread position: 816-1125
Cow position: chrX:616342-616008 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 232
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 75, 0

Conread position: 816-1125
Cow position: chrX:7695669-7695994 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 219
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 43, 149

Conread position: 816-1125
Cow position: chrX:22074720-22075026 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 228
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 71, 36

Conread position: 816-1125
Cow position: chrX:26881648-26881331 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 270

Conread position: 816-1125
Cow position: chrX:29050167-29050473 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 208

Conread position: 816-1125
Cow position: chrX:29229930-29230238 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 217
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 200, 63

Conread position: 816-1125
Cow position: chrX:29542299-29541997 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 221
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 87, 175

Conread position: 816-1125
Cow position: chrX:34313949-34314252 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 112

Conread position: 816-1125
Cow position: chrX:34792388-34792092 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 225
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 123, 67

Conread position: 816-1125
Cow position: chrX:37781191-37780881 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 220

Conread position: 816-1125
Cow position: chrX:38853118-38853442 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 231
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 79, 39

Conread position: 816-1125
Cow position: chrX:40685411-40685098 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 219

Conread position: 816-1126
Cow position: chrX:11656012-11656310 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 816-1127
Cow position: chrX:10252261-10251970 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 216
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 77, 0

Conread position: 816-1127
Cow position: chrX:11633600-11633915 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 218
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 82, 220

Conread position: 816-1130
Cow position: chrX:30922106-30922409 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 208
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 281, 66

Conread position: 816-1130
Cow position: chrX:47280012-47279700 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 209
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 73, 93

Conread position: 816-1130
Cow position: chrX:47484345-47484022 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 218
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 108, 197

Conread position: 816-1131
Cow position: chrX:38094601-38094290 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 216
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 62, 217

Conread position: 816-1132
Cow position: chrX:5017494-5017178 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 231
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 59, 91

Conread position: 816-1132
Cow position: chrX:40680531-40680850 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 216
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 70, 226

Conread position: 816-1133
Cow position: chrX:6559525-6559217 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 215
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 109, 75

Conread position: 816-1133
Cow position: chrX:21593208-21593528 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 219
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 135, 73

Conread position: 816-1133
Cow position: chrX:24365905-24365581 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 230
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 79, 178

Conread position: 816-1133
Cow position: chrX:25207921-25207623 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 212
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 206, 55

Conread position: 816-1133
Cow position: chrX:32020199-32019895 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 207
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 816-1133
Cow position: chrX:42927899-42927590 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 234
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 127, 69

Conread position: 816-1133
Cow position: chrX:46532581-46532253 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 214
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 69, 234

Conread position: 816-1134
Cow position: chrX:11614620-11614915 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 217
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 129, 78

Conread position: 816-1137
Cow position: chrX:31250307-31250634 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 221
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 103, 246

Conread position: 816-1138
Cow position: chrX:1466081-1466407 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 219

Conread position: 816-1138
Cow position: chrX:27261108-27261432 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 224
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 65, 247

Conread position: 816-1138
Cow position: chrX:35822263-35822574 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 217
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 84, 34

Conread position: 816-1138
Cow position: chrX:39220000-39220331 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 231
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 70, 35

Conread position: 816-1139
Cow position: chrX:5118582-5118252 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 46

Conread position: 816-1140
Cow position: chrX:9651105-9650780 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 224
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 79, 37

Conread position: 816-1141
Cow position: chrX:8869484-8869158 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 210

Conread position: 816-1141
Cow position: chrX:27145543-27145844 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 230
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 52, 0

Conread position: 816-1141
Cow position: chrX:27705507-27705836 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 220
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 111, 78

Conread position: 816-1141
Cow position: chrX:41526601-41526288 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 217
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 30, 0

Conread position: 816-1141
Cow position: chrX:41879012-41878688 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 215
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 34, 23

Conread position: 816-1142
Cow position: chrX:31949013-31948688 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 223
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 66, 24

Conread position: 816-1142
Cow position: chrX:41027076-41027408 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 221
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 74, 248

Conread position: 816-1142
Cow position: chrX:46291058-46291388 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 229
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 84, 58

Conread position: 816-1143
Cow position: chrX:30962953-30962622 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 221
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 66, 92

Conread position: 816-1143
Cow position: chrX:47345254-47345580 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 233
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 126, 69

Conread position: 816-1144
Cow position: chrX:7721909-7722224 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 221
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 65, 196

Conread position: 816-1144
Cow position: chrX:17949567-17949245 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 226
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 106, 66

Conread position: 816-1144
Cow position: chrX:29601910-29601579 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 234
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 79, 218

Conread position: 816-1145
Cow position: chrX:27431994-27431675 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 232
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 129, 67

Conread position: 816-1145
Cow position: chrX:40826831-40826500 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 229
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 124, 114

Conread position: 816-1145
Cow position: chrX:45598681-45598357 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 215
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 124, 73

Conread position: 816-1146
Cow position: chrX:4403235-4403570 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 234
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 109, 33

Conread position: 816-1146
Cow position: chrX:12979907-12979577 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 239
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 73, 35

Conread position: 816-1146
Cow position: chrX:42381180-42380862 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 233
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 229, 17

Conread position: 816-1146
Cow position: chrX:46587740-46588074 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 226
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 65, 203

Conread position: 816-1147
Cow position: chrX:9770756-9770436 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 218
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 103, 63

Conread position: 816-1148
Cow position: chrX:16348648-16348296 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 240
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 65, 145

Conread position: 816-1148
Cow position: chrX:20677291-20677616 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 222
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 95, 67

Conread position: 816-1148
Cow position: chrX:34554646-34554979 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 222
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 66, 101

Conread position: 816-1148
Cow position: chrX:34837134-34836824 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 244
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 127, 20

Conread position: 816-1148
Cow position: chrX:38218630-38218969 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 234
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 62, 42

Conread position: 816-1149
Cow position: chrX:12095853-12095512 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 235
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 99, 84

Conread position: 816-1149
Cow position: chrX:15147267-15146942 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 219
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 95, 73

Conread position: 816-1149
Cow position: chrX:46072900-46072573 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 229
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 79, 219

Conread position: 816-1150
Cow position: chrX:151825-152161 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 214
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 102, 82

Conread position: 816-1150
Cow position: chrX:20339969-20339637 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 226
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 108, 57

Conread position: 816-1150
Cow position: chrX:23563870-23563537 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 218
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 103, 66

Conread position: 816-1151
Cow position: chrX:17231654-17231991 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 240
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 66, 21

Conread position: 816-1151
Cow position: chrX:45976842-45977180 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 237
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 75, 209

Conread position: 816-1151
Cow position: chrX:47873416-47873079 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 220
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 109, 84

Conread position: 816-1152
Cow position: chrX:30133400-30133059 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 237
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 80, 65

Conread position: 816-1152
Cow position: chrX:31436398-31436730 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 40

Conread position: 816-1152
Cow position: chrX:33654921-33654581 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 232
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 30, 96

Conread position: 816-1152
Cow position: chrX:34411762-34412105 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 220

Conread position: 817-951
Cow position: chrX:5677971-5677838 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 125, 0

Conread position: 817-1043
Cow position: chrX:19273801-19273555 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 817-1048
Cow position: chrX:23113199-23113441 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 169
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 66, 29

Conread position: 817-1052
Cow position: chrX:14599454-14599695 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 167
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 74, 128

Conread position: 817-1055
Cow position: chrX:33493698-33493941 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 64, 0

Conread position: 817-1055
Cow position: chrX:34401919-34402171 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 177
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 64, 98

Conread position: 817-1056
Cow position: chrX:23562556-23562794 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 169
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 123, 41

Conread position: 817-1084
Cow position: chrX:34532442-34532708 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 199
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 126, 41

Conread position: 817-1092
Cow position: chrX:13647864-13647586 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 204
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 83, 46

Conread position: 817-1103
Cow position: chrX:35542816-35543093 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 51

Conread position: 817-1114
Cow position: chrX:35273277-35273592 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 206
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 65, 20

Conread position: 817-1123
Cow position: chrX:36283273-36283569 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 202
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 111, 66

Conread position: 817-1125
Cow position: chrX:23497747-23497466 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 219
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 78, 0

Conread position: 817-1125
Cow position: chrX:34502843-34503157 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 216
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 118, 83

Conread position: 817-1125
Cow position: chrX:36866092-36866404 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 211
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 85, 187

Conread position: 817-1128
Cow position: chrX:46032799-46032494 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 210
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 71, 88

Conread position: 817-1130
Cow position: chrX:38549368-38549682 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 222
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 64, 82

Conread position: 817-1133
Cow position: chrX:4632928-4632615 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 211
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 130, 32

Conread position: 817-1133
Cow position: chrX:20168479-20168792 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 214
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 92, 81

Conread position: 817-1133
Cow position: chrX:22115396-22115075 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 77

Conread position: 817-1146
Cow position: chrX:32420141-32420458 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 225
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 98, 57

Conread position: 817-1151
Cow position: chrX:22283753-22284096 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 230
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 65, 198

Conread position: 817-1152
Cow position: chrX:3579867-3580205 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 231
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 94, 39

Conread position: 817-1152
Cow position: chrX:33000824-33001153 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 231
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 78, 154

Conread position: 817-1152
Cow position: chrX:38935200-38935536 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 214
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 192

Conread position: 818-1055
Cow position: chrX:9365753-9365512 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 93, 56

Conread position: 818-1055
Cow position: chrX:29680338-29680098 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 121, 69

Conread position: 818-1116
Cow position: chrX:34543710-34544008 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 206
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 74, 38

Conread position: 818-1125
Cow position: chrX:40035521-40035211 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 223
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 74, 61

Conread position: 818-1125
Cow position: chrX:43115074-43115380 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 216
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 72, 52

Conread position: 818-1133
Cow position: chrX:161335-161636 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 215
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 107, 55

Conread position: 818-1140
Cow position: chrX:4153113-4152797 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 231
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 79, 192

Conread position: 818-1142
Cow position: chrX:48071083-48071413 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 215
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 107, 64

Conread position: 818-1151
Cow position: chrX:35885805-35885479 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 230
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 64, 49

Conread position: 819-1086
Cow position: chrX:27301794-27302069 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 190
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 96, 74

Conread position: 819-1086
Cow position: chrX:40283049-40283315 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 96, 76

Conread position: 819-1093
Cow position: chrX:21672479-21672761 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 194
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 92, 75

Conread position: 819-1122
Cow position: chrX:45110579-45110879 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 209
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 124, 70

Conread position: 819-1123
Cow position: chrX:34565204-34565514 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 214
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 78, 159

Conread position: 819-1133
Cow position: chrX:7351224-7351541 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 213
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 126, 74

Conread position: 819-1133
Cow position: chrX:8917320-8917635 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 221
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 92, 70

Conread position: 819-1137
Cow position: chrX:26492930-26493247 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 226
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 64, 104

Conread position: 819-1145
Cow position: chrX:10865944-10865621 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 219
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 64, 88

Conread position: 819-1152
Cow position: chrX:14955841-14955507 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 225
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 108, 54

Conread position: 820-1125
Cow position: chrX:34441527-34441221 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 213
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 61, 79

Conread position: 820-1142
Cow position: chrX:31729366-31729682 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 220
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 99, 61

Conread position: 820-1145
Cow position: chrX:44054731-44055053 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 218
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 72, 92

Conread position: 821-1127
Cow position: chrX:42247261-42246947 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 218
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 68, 222

Conread position: 822-1047
Cow position: chrX:11717862-11717627 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 822-1092
Cow position: chrX:9635259-9634991 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 183
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 52, 87

Conread position: 822-1103
Cow position: chrX:31294638-31294360 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 189
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 6, 84

Conread position: 822-1138
Cow position: chrX:21642552-21642232 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 210
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 108, 58

Conread position: 822-1141
Cow position: chrX:27509097-27508778 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 211
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 90, 152

Conread position: 823-1027
Cow position: chrX:42470015-42469805 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 73, 31

Conread position: 823-1124
Cow position: chrX:48003774-48004076 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 197
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 102, 77

Conread position: 823-1140
Cow position: chrX:1088209-1087902 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 212
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 64, 35

Conread position: 827-1056
Cow position: chrX:32623498-32623735 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 163
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 56, 202

Conread position: 827-1150
Cow position: chrX:18111320-18111632 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 209
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 79, 97

Conread position: 829-1010
Cow position: chrX:12082392-12082205 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 76, 131

Conread position: 830-1109
Cow position: chrX:47344228-47344514 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 187
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 72, 184

Conread position: 830-1147
Cow position: chrX:5134406-5134724 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 219
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 13, 61

Conread position: 831-1145
Cow position: chrX:27206743-27207045 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 215
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 13, 68

Conread position: 833-1124
Cow position: chrX:13146918-13147214 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 199
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 107, 48

Conread position: 833-1124
Cow position: chrX:32208874-32208598 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 199
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 61, 0

Conread position: 833-1142
Cow position: chrX:296332-296639 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 213
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 59, 97

Conread position: 834-1123
Cow position: chrX:13121868-13122173 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 202
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 42, 219

Conread position: 834-1125
Cow position: chrX:4109128-4109416 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 197
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 104, 66

Conread position: 834-1150
Cow position: chrX:20957186-20957494 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 226
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 108, 54

Conread position: 835-1086
Cow position: chrX:18964885-18964633 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 163
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 63, 21

Conread position: 838-1056
Cow position: chrX:32978135-32977918 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 107, 49

Conread position: 838-1150
Cow position: chrX:34505109-34504797 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 226
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 47, 68

Conread position: 839-1051
Cow position: chrX:878440-878222 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 44, 196

Conread position: 839-1096
Cow position: chrX:46022728-46022977 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 172
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 93, 43

Conread position: 839-1117
Cow position: chrX:6407487-6407767 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 189
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 62, 90

Conread position: 839-1118
Cow position: chrX:10516193-10516478 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 195
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 44, 203

Conread position: 839-1125
Cow position: chrX:13913012-13913306 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 203
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 51, 15

Conread position: 839-1133
Cow position: chrX:4399066-4399355 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 197
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 44, 85

Conread position: 839-1133
Cow position: chrX:12290665-12290959 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 199
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 81, 57

Conread position: 839-1133
Cow position: chrX:45502088-45502373 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 205
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 95, 56

Conread position: 840-1022
Cow position: chrX:37574788-37574971 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 107, 53

Conread position: 840-1047
Cow position: chrX:23091812-23092027 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 149
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 64, 22

Conread position: 840-1092
Cow position: chrX:169601-169343 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 179
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 103, 56

Conread position: 840-1093
Cow position: chrX:14275802-14275549 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 50, 201

Conread position: 840-1123
Cow position: chrX:19469562-19469285 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 204
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 102, 54

Conread position: 840-1137
Cow position: chrX:40108572-40108270 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 200
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 87, 38

Conread position: 841-1031
Cow position: chrX:46429875-46429679 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 50, 11

Conread position: 841-1113
Cow position: chrX:44339379-44339102 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 181
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 47, 89

Conread position: 842-1146
Cow position: chrX:5919436-5919739 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 220
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 40, 195

Conread position: 842-1148
Cow position: chrX:35985764-35986069 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 169

Conread position: 843-1012
Cow position: chrX:47362676-47362502 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 9

Conread position: 843-1151
Cow position: chrX:11825693-11825389 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 200
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 76

Conread position: 844-1125
Cow position: chrX:9360836-9361113 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 192
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 71, 52

Conread position: 847-1123
Cow position: chrX:22393035-22392759 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 207
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 45, 179

Conread position: 850-1125
Cow position: chrX:37072348-37072617 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 203
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 47, 24

Conread position: 851-1152
Cow position: chrX:27306407-27306698 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 211
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 44, 189

Conread position: 852-1149
Cow position: chrX:6599828-6599520 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 215
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 41, 270

Conread position: 853-1133
Cow position: chrX:11326143-11325870 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 207
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 40, 157

Conread position: 855-1127
Cow position: chrX:19394511-19394788 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 201
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 90, 208

Conread position: 856-1122
Cow position: chrX:16984587-16984863 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 198
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 29, 80

Conread position: 856-1125
Cow position: chrX:24749047-24749318 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 188
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 89, 180

Conread position: 856-1133
Cow position: chrX:40532084-40531790 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 207
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 28, 43

Conread position: 862-1125
Cow position: chrX:28940212-28940475 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 188
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 21, 9

Conread position: 862-1152
Cow position: chrX:17956661-17956947 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 195
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 49, 34

Conread position: 863-1119
Cow position: chrX:22482732-22482464 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 190
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 29, 109

Conread position: 863-1119
Cow position: chrX:38642216-38642467 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 180
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 82, 35

Conread position: 864-1138
Cow position: chrX:41941594-41941866 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 193
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 21

Conread position: 881-1149
Cow position: chrX:16836303-16836041 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 185
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 18, 135

Conread position: 883-1147
Cow position: chrX:12972668-12972930 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 194
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 44, 14

Conread position: 883-1148
Cow position: chrX:26843281-26843012 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 190
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 32, 13

Conread position: 883-1152
Cow position: chrX:40336896-40337170 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 189
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 15, 80

Conread position: 892-1133
Cow position: chrX:2935952-2936194 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 188
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 51, 147

Conread position: 900-1133
Cow position: chrX:39290362-39290594 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 174
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 41, 125

Conread position: 900-1144
Cow position: chrX:42479836-42480075 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 174
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 45, 133

Conread position: 901-1149
Cow position: chrX:27668954-27668708 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 188
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 44, 132

Conread position: 908-1117
Cow position: chrX:29467767-29467559 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 37, 131

Conread position: 916-1144
Cow position: chrX:4559757-4559983 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 155
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 44

Conread position: 919-1147
Cow position: chrX:597448-597228 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 157
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 19, 68

Conread position: 926-1130
Cow position: chrX:6634379-6634581 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 141
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 15, 11

Conread position: 935-1146
Cow position: chrX:32943032-32942828 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 147
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 93, 0

Conread position: 940-1123
Cow position: chrX:38587794-38587616 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 940-1125
Cow position: chrX:42875261-42875440 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 94, 0

Conread position: 940-1133
Cow position: chrX:20583715-20583898 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 93, 0

Conread position: 940-1133
Cow position: chrX:31983536-31983338 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 150
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 76, 0

Conread position: 940-1134
Cow position: chrX:40046526-40046326 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 75, 16

Conread position: 940-1137
Cow position: chrX:23359062-23358874 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 16, 0

Conread position: 940-1141
Cow position: chrX:19203297-19203098 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 59

Conread position: 940-1142
Cow position: chrX:20666852-20666654 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 97, 48

Conread position: 940-1143
Cow position: chrX:32866924-32867120 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 172, 87

Conread position: 940-1145
Cow position: chrX:35409801-35410000 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 77, 58

Conread position: 940-1148
Cow position: chrX:38301858-38302069 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 142
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 940-1151
Cow position: chrX:42449965-42449754 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 180, 94

Conread position: 941-1124
Cow position: chrX:23471816-23471638 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 941-1137
Cow position: chrX:46079135-46079332 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 86, 66

Conread position: 941-1140
Cow position: chrX:34991414-34991606 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 93, 0

Conread position: 941-1141
Cow position: chrX:1101607-1101798 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 179, 78

Conread position: 943-1133
Cow position: chrX:24425950-24425762 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 56

Conread position: 947-1124
Cow position: chrX:6480540-6480365 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 86, 0

Conread position: 956-1124
Cow position: chrX:41215387-41215553 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 78, 0

Conread position: 958-1126
Cow position: chrX:40556392-40556230 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 92

Conread position: 958-1126
Cow position: chrX:40648962-40649134 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 958-1151
Cow position: chrX:14135745-14135929 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 76, 0

Conread position: 959-1123
Cow position: chrX:11589299-11589138 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 97, 0

Conread position: 960-1125
Cow position: chrX:4750263-4750107 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 963-1136
Cow position: chrX:29682039-29681876 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 58, 0

Show alignments to all cow chromosomes.