Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8027I19.5 |
| Conread position: | 163-345 |
| Cow position: | chr1:6194872-6194683 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 15, 7 |
| Conread position: | 165-442 |
| Cow position: | chr1:34692857-34692587 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 52, 160 |
| Conread position: | 168-341 |
| Cow position: | chr1:9259125-9258945 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 168-345 |
| Cow position: | chr1:57973037-57973220 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 47, 14 |
| Conread position: | 168-346 |
| Cow position: | chr1:44044411-44044226 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 47, 168 |
| Conread position: | 168-405 |
| Cow position: | chr1:84150832-84150593 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 54, 168 |
| Conread position: | 168-410 |
| Cow position: | chr1:38397309-38397090 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 168-421 |
| Cow position: | chr1:29034923-29034673 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 37, 187 |
| Conread position: | 168-427 |
| Cow position: | chr1:91750834-91751092 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 47, 168 |
| Conread position: | 168-430 |
| Cow position: | chr1:56723787-56723522 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 47, 171 |
| Conread position: | 168-432 |
| Cow position: | chr1:56164178-56163916 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 45, 189 |
| Conread position: | 168-432 |
| Cow position: | chr1:59209522-59209785 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 201 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 44, 189 |
| Conread position: | 168-438 |
| Cow position: | chr1:24651914-24651644 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 47, 189 |
| Conread position: | 168-445 |
| Cow position: | chr1:33851914-33851630 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 45, 189 |
| Conread position: | 168-445 |
| Cow position: | chr1:69767091-69766815 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 47, 171 |
| Conread position: | 168-445 |
| Cow position: | chr1:82912514-82912791 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 210 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 33, 172 |
| Conread position: | 168-458 |
| Cow position: | chr1:11291479-11291763 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 218 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 47, 74 |
| Conread position: | 168-458 |
| Cow position: | chr1:13450833-13450549 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 217 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 47, 172 |
| Conread position: | 168-458 |
| Cow position: | chr1:17035930-17036214 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 41, 189 |
| Conread position: | 168-458 |
| Cow position: | chr1:21088042-21087756 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 47, 171 |
| Conread position: | 168-458 |
| Cow position: | chr1:31397321-31397033 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 217 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 38, 191 |
| Conread position: | 168-458 |
| Cow position: | chr1:39544398-39544112 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 47, 74 |
| Conread position: | 168-458 |
| Cow position: | chr1:40053983-40053698 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 218 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 47, 188 |
| Conread position: | 168-458 |
| Cow position: | chr1:67834512-67834798 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 47, 171 |
| Conread position: | 168-460 |
| Cow position: | chr1:5355755-5355464 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 216 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 47, 189 |
| Conread position: | 168-460 |
| Cow position: | chr1:8554960-8554666 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 47, 172 |
| Conread position: | 168-460 |
| Cow position: | chr1:17012110-17012401 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 47, 189 |
| Conread position: | 168-460 |
| Cow position: | chr1:56490480-56490188 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 215 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 48, 190 |
| Conread position: | 168-460 |
| Cow position: | chr1:80358552-80358843 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 217 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 46, 189 |
| Conread position: | 168-460 |
| Cow position: | chr1:82565132-82564841 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 214 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 47, 189 |
| Conread position: | 168-460 |
| Cow position: | chr1:85792310-85792024 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 47, 70 |
| Conread position: | 168-460 |
| Cow position: | chr1:89426202-89425911 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 189 |
| Conread position: | 168-460 |
| Cow position: | chr1:95239997-95239707 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 217 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 47, 74 |
| Conread position: | 168-465 |
| Cow position: | chr1:82366813-82366518 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 48, 189 |
| Conread position: | 168-468 |
| Cow position: | chr1:82653294-82652983 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 47, 219 |
| Conread position: | 168-487 |
| Cow position: | chr1:40684068-40684380 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 47, 189 |
| Conread position: | 168-487 |
| Cow position: | chr1:86547510-86547824 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 232 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 47, 195 |
| Conread position: | 168-496 |
| Cow position: | chr1:53199179-53198857 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 47, 190 |
| Conread position: | 168-502 |
| Cow position: | chr1:28873709-28873377 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 239 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 47, 189 |
| Conread position: | 168-502 |
| Cow position: | chr1:52358643-52358974 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 235 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 47, 189 |
| Conread position: | 168-509 |
| Cow position: | chr1:15026990-15026654 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 248 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 15, 177 |
| Conread position: | 168-511 |
| Cow position: | chr1:33389764-33389424 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 192 |
| Conread position: | 168-527 |
| Cow position: | chr1:67327634-67327991 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 240 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 16, 116 |
| Conread position: | 169-404 |
| Cow position: | chr1:40308905-40308669 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 13, 62 |
| Conread position: | 169-426 |
| Cow position: | chr1:57424211-57424471 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 14, 192 |
| Conread position: | 169-460 |
| Cow position: | chr1:71561943-71562235 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 214 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 14, 190 |
| Conread position: | 169-466 |
| Cow position: | chr1:77511297-77511598 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 44, 145 |
| Conread position: | 169-470 |
| Cow position: | chr1:31417884-31418183 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 39, 62 |
| Conread position: | 169-488 |
| Cow position: | chr1:31365457-31365771 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 13, 133 |
| Conread position: | 169-503 |
| Cow position: | chr1:17941154-17941484 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 42, 123 |
| Conread position: | 169-503 |
| Cow position: | chr1:88131405-88131074 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 5, 188 |
| Conread position: | 169-530 |
| Cow position: | chr1:59647915-59647546 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 236 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 47, 251 |
| Conread position: | 170-430 |
| Cow position: | chr1:29362924-29362664 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 45, 102 |
| Conread position: | 170-503 |
| Cow position: | chr1:42737085-42736755 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 242 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 45, 188 |
| Conread position: | 171-327 |
| Cow position: | chr1:1460567-1460721 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 120, 14 |
| Conread position: | 171-346 |
| Cow position: | chr1:58178361-58178541 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 171-415 |
| Cow position: | chr1:11860613-11860852 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 45, 25 |
| Conread position: | 171-445 |
| Cow position: | chr1:66999639-66999379 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 44, 13 |
| Conread position: | 171-460 |
| Cow position: | chr1:18879768-18880055 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 42, 99 |
| Conread position: | 171-460 |
| Cow position: | chr1:60339928-60339643 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 212 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 44, 183 |
| Conread position: | 171-501 |
| Cow position: | chr1:102549860-102549540 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 233 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 42, 69 |
| Conread position: | 171-509 |
| Cow position: | chr1:29033747-29033410 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 239 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 49, 44 |
| Conread position: | 171-512 |
| Cow position: | chr1:31329768-31330112 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 245 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 98, 14 |
| Conread position: | 171-535 |
| Cow position: | chr1:98659255-98659619 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 262 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 44, 153 |
| Conread position: | 172-445 |
| Cow position: | chr1:40574838-40574566 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 207 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 43, 164 |
| Conread position: | 172-458 |
| Cow position: | chr1:20829514-20829232 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 43, 185 |
| Conread position: | 173-455 |
| Cow position: | chr1:58883438-58883720 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 42, 184 |
| Conread position: | 173-499 |
| Cow position: | chr1:82923551-82923876 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 43, 182 |
| Conread position: | 173-512 |
| Cow position: | chr1:18012878-18013210 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 240 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 55, 42 |
| Conread position: | 174-474 |
| Cow position: | chr1:31402868-31403171 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 214 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 36, 56 |
| Conread position: | 175-437 |
| Cow position: | chr1:28278594-28278333 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 40, 75 |
| Conread position: | 175-474 |
| Cow position: | chr1:18027134-18027439 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 25, 169 |
| Conread position: | 177-460 |
| Cow position: | chr1:28711536-28711254 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 36, 160 |
| Conread position: | 180-489 |
| Cow position: | chr1:58336458-58336151 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 224 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 33, 177 |
| Conread position: | 182-503 |
| Cow position: | chr1:25179410-25179727 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 233 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 33, 177 |
| Conread position: | 186-522 |
| Cow position: | chr1:99914034-99913702 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 159 |
| Conread position: | 187-365 |
| Cow position: | chr1:55777194-55777009 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 28, 155 |
| Conread position: | 187-419 |
| Cow position: | chr1:25550574-25550344 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 26, 61 |
| Conread position: | 187-431 |
| Cow position: | chr1:26518273-26518514 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 29, 168 |
| Conread position: | 187-439 |
| Cow position: | chr1:5502581-5502330 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 28, 170 |
| Conread position: | 187-441 |
| Cow position: | chr1:57657408-57657167 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 48, 28 |
| Conread position: | 187-445 |
| Cow position: | chr1:68606928-68607188 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 28, 147 |
| Conread position: | 187-473 |
| Cow position: | chr1:86698602-86698886 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 28, 170 |
| Conread position: | 187-489 |
| Cow position: | chr1:65386942-65386644 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 215 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 28, 170 |
| Conread position: | 187-489 |
| Cow position: | chr1:76544926-76545222 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 28, 103 |
| Conread position: | 187-489 |
| Cow position: | chr1:76752036-76752337 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 28, 171 |
| Conread position: | 187-499 |
| Cow position: | chr1:69921822-69922135 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 28, 170 |
| Conread position: | 187-502 |
| Cow position: | chr1:85882608-85882305 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 28, 170 |
| Conread position: | 187-503 |
| Cow position: | chr1:21999341-21999654 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 234 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 28, 158 |
| Conread position: | 187-503 |
| Cow position: | chr1:49973575-49973887 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 28, 159 |
| Conread position: | 187-503 |
| Cow position: | chr1:62244030-62244344 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 28, 170 |
| Conread position: | 187-503 |
| Cow position: | chr1:69403596-69403283 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 228 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 28, 170 |
| Conread position: | 187-503 |
| Cow position: | chr1:73070439-73070753 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 28, 171 |
| Conread position: | 187-503 |
| Cow position: | chr1:91892506-91892820 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 232 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 28, 175 |
| Conread position: | 187-504 |
| Cow position: | chr1:12061605-12061911 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 25, 104 |
| Conread position: | 187-505 |
| Cow position: | chr1:72186269-72186578 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 227 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 28, 166 |
| Conread position: | 187-508 |
| Cow position: | chr1:63605163-63605482 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 155 |
| Conread position: | 188-445 |
| Cow position: | chr1:43570796-43571049 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 31, 25 |
| Conread position: | 188-503 |
| Cow position: | chr1:56143723-56144035 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 27, 168 |
| Conread position: | 188-523 |
| Cow position: | chr1:31811686-31811360 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 230 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 27, 170 |
| Conread position: | 188-552 |
| Cow position: | chr1:32662358-32661983 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 27, 181 |
| Conread position: | 189-503 |
| Cow position: | chr1:30534410-30534721 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 220 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 26, 168 |
| Conread position: | 190-529 |
| Cow position: | chr1:22905382-22905056 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 45, 25 |
| Conread position: | 192-503 |
| Cow position: | chr1:3385411-3385717 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 228 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 20, 149 |
| Conread position: | 193-500 |
| Cow position: | chr1:97226102-97226405 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 22, 167 |
| Conread position: | 193-503 |
| Cow position: | chr1:102434429-102434736 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 222 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 22, 140 |
| Conread position: | 193-517 |
| Cow position: | chr1:40512440-40512759 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 93, 134 |
| Conread position: | 194-552 |
| Cow position: | chr1:29609074-29609417 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 96, 16 |
| Conread position: | 195-421 |
| Cow position: | chr1:18242734-18242956 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 20, 44 |
| Conread position: | 199-503 |
| Cow position: | chr1:33551523-33551227 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 95, 138 |
| Conread position: | 202-500 |
| Cow position: | chr1:72081373-72081085 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 92, 150 |
| Conread position: | 202-503 |
| Cow position: | chr1:79456377-79456669 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 92, 156 |
| Conread position: | 202-503 |
| Cow position: | chr1:93855114-93854824 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 204-504 |
| Cow position: | chr1:30519280-30518995 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 6, 24 |
| Conread position: | 220-505 |
| Cow position: | chr1:85780202-85780477 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 75, 132 |
| Conread position: | 228-458 |
| Cow position: | chr1:91899560-91899339 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 58, 103 |
| Conread position: | 228-503 |
| Cow position: | chr1:72981837-72981570 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 66, 124 |
| Conread position: | 230-458 |
| Cow position: | chr1:9381990-9382205 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 56, 126 |
| Conread position: | 230-511 |
| Cow position: | chr1:89770095-89770378 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 54, 82 |
| Conread position: | 236-553 |
| Cow position: | chr1:78361701-78361387 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 20, 47 |
| Conread position: | 240-517 |
| Cow position: | chr1:88269660-88269924 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 199 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 206, 19 |
| Conread position: | 240-531 |
| Cow position: | chr1:21544266-21543985 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 162, 97 |
| Conread position: | 241-552 |
| Cow position: | chr1:31421024-31421328 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 45 |
| Conread position: | 245-520 |
| Cow position: | chr1:63502406-63502135 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 113 |
| Conread position: | 256-460 |
| Cow position: | chr1:30283008-30283205 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 35, 95 |
| Conread position: | 262-496 |
| Cow position: | chr1:99675202-99675428 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 33, 12 |
| Conread position: | 276-529 |
| Cow position: | chr1:40369609-40369857 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 23, 99 |
| Conread position: | 277-551 |
| Cow position: | chr1:61737605-61737867 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 41, 79 |
| Conread position: | 286-478 |
| Cow position: | chr1:61309515-61309334 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 291-550 |
| Cow position: | chr1:44100860-44101117 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 63 |
| Conread position: | 293-553 |
| Cow position: | chr1:98864230-98864496 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 198 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 39, 82 |
| Conread position: | 341-554 |
| Cow position: | chr1:25886300-25886515 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 162, 88 |
| Conread position: | 342-527 |
| Cow position: | chr1:86610293-86610110 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 37, 27 |
| Conread position: | 347-500 |
| Cow position: | chr1:45019423-45019572 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 411-546 |
| Cow position: | chr1:38396962-38396831 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
Show alignments to all cow chromosomes.