Cow genome map

Conread name: Ss1.1-Pig4-TMW8027I19.5

Conread position: 163-345
Cow position:
Alignm length: 192
Alignm identity: 140
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 7

Conread position: 165-442
Cow position:
Alignm length: 285
Alignm identity: 192
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 52, 160

Conread position: 168-341
Cow position:
Alignm length: 181
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 168-345
Cow position:
Alignm length: 186
Alignm identity: 135
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 47, 14

Conread position: 168-346
Cow position:
Alignm length: 187
Alignm identity: 138
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 47, 168

Conread position: 168-405
Cow position:
Alignm length: 244
Alignm identity: 166
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 168

Conread position: 168-410
Cow position:
Alignm length: 243
Alignm identity: 175
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 168-421
Cow position:
Alignm length: 259
Alignm identity: 188
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 37, 187

Conread position: 168-427
Cow position:
Alignm length: 267
Alignm identity: 195
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 47, 168

Conread position: 168-430
Cow position:
Alignm length: 274
Alignm identity: 196
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 47, 171

Conread position: 168-432
Cow position:
Alignm length: 272
Alignm identity: 195
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 45, 189

Conread position: 168-432
Cow position:
Alignm length: 272
Alignm identity: 201
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 44, 189

Conread position: 168-438
Cow position:
Alignm length: 279
Alignm identity: 193
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 47, 189

Conread position: 168-445
Cow position:
Alignm length: 293
Alignm identity: 208
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 45, 189

Conread position: 168-445
Cow position:
Alignm length: 285
Alignm identity: 204
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 47, 171

Conread position: 168-445
Cow position:
Alignm length: 286
Alignm identity: 210
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 33, 172

Conread position: 168-458
Cow position:
Alignm length: 298
Alignm identity: 218
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 47, 74

Conread position: 168-458
Cow position:
Alignm length: 298
Alignm identity: 217
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 47, 172

Conread position: 168-458
Cow position:
Alignm length: 298
Alignm identity: 212
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 41, 189

Conread position: 168-458
Cow position:
Alignm length: 298
Alignm identity: 212
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 47, 171

Conread position: 168-458
Cow position:
Alignm length: 300
Alignm identity: 217
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 38, 191

Conread position: 168-458
Cow position:
Alignm length: 299
Alignm identity: 215
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 47, 74

Conread position: 168-458
Cow position:
Alignm length: 298
Alignm identity: 218
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 47, 188

Conread position: 168-458
Cow position:
Alignm length: 299
Alignm identity: 214
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 47, 171

Conread position: 168-460
Cow position:
Alignm length: 300
Alignm identity: 216
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 47, 189

Conread position: 168-460
Cow position:
Alignm length: 304
Alignm identity: 214
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 47, 172

Conread position: 168-460
Cow position:
Alignm length: 300
Alignm identity: 212
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 47, 189

Conread position: 168-460
Cow position:
Alignm length: 301
Alignm identity: 215
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 48, 190

Conread position: 168-460
Cow position:
Alignm length: 300
Alignm identity: 217
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 46, 189

Conread position: 168-460
Cow position:
Alignm length: 300
Alignm identity: 214
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 47, 189

Conread position: 168-460
Cow position:
Alignm length: 300
Alignm identity: 206
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 47, 70

Conread position: 168-460
Cow position:
Alignm length: 300
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 189

Conread position: 168-460
Cow position:
Alignm length: 301
Alignm identity: 217
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 47, 74

Conread position: 168-465
Cow position:
Alignm length: 305
Alignm identity: 213
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 48, 189

Conread position: 168-468
Cow position:
Alignm length: 313
Alignm identity: 220
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 47, 219

Conread position: 168-487
Cow position:
Alignm length: 327
Alignm identity: 222
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 47, 189

Conread position: 168-487
Cow position:
Alignm length: 327
Alignm identity: 232
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 47, 195

Conread position: 168-496
Cow position:
Alignm length: 337
Alignm identity: 233
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 47, 190

Conread position: 168-502
Cow position:
Alignm length: 342
Alignm identity: 239
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 47, 189

Conread position: 168-502
Cow position:
Alignm length: 342
Alignm identity: 235
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 47, 189

Conread position: 168-509
Cow position:
Alignm length: 350
Alignm identity: 248
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 15, 177

Conread position: 168-511
Cow position:
Alignm length: 351
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 192

Conread position: 168-527
Cow position:
Alignm length: 370
Alignm identity: 240
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 16, 116

Conread position: 169-404
Cow position:
Alignm length: 246
Alignm identity: 173
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 13, 62

Conread position: 169-426
Cow position:
Alignm length: 269
Alignm identity: 193
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 14, 192

Conread position: 169-460
Cow position:
Alignm length: 301
Alignm identity: 214
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 14, 190

Conread position: 169-466
Cow position:
Alignm length: 305
Alignm identity: 209
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 44, 145

Conread position: 169-470
Cow position:
Alignm length: 310
Alignm identity: 210
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 39, 62

Conread position: 169-488
Cow position:
Alignm length: 327
Alignm identity: 227
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 13, 133

Conread position: 169-503
Cow position:
Alignm length: 343
Alignm identity: 228
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 42, 123

Conread position: 169-503
Cow position:
Alignm length: 342
Alignm identity: 238
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 5, 188

Conread position: 169-530
Cow position:
Alignm length: 373
Alignm identity: 236
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 47, 251

Conread position: 170-430
Cow position:
Alignm length: 269
Alignm identity: 197
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 45, 102

Conread position: 170-503
Cow position:
Alignm length: 342
Alignm identity: 242
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 45, 188

Conread position: 171-327
Cow position:
Alignm length: 159
Alignm identity: 116
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 120, 14

Conread position: 171-346
Cow position:
Alignm length: 181
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 171-415
Cow position:
Alignm length: 252
Alignm identity: 176
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 45, 25

Conread position: 171-445
Cow position:
Alignm length: 282
Alignm identity: 197
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 44, 13

Conread position: 171-460
Cow position:
Alignm length: 297
Alignm identity: 210
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 42, 99

Conread position: 171-460
Cow position:
Alignm length: 295
Alignm identity: 212
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 44, 183

Conread position: 171-501
Cow position:
Alignm length: 339
Alignm identity: 233
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 42, 69

Conread position: 171-509
Cow position:
Alignm length: 349
Alignm identity: 239
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 49, 44

Conread position: 171-512
Cow position:
Alignm length: 353
Alignm identity: 245
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 98, 14

Conread position: 171-535
Cow position:
Alignm length: 378
Alignm identity: 262
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 44, 153

Conread position: 172-445
Cow position:
Alignm length: 281
Alignm identity: 207
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 43, 164

Conread position: 172-458
Cow position:
Alignm length: 294
Alignm identity: 208
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 43, 185

Conread position: 173-455
Cow position:
Alignm length: 291
Alignm identity: 206
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 42, 184

Conread position: 173-499
Cow position:
Alignm length: 334
Alignm identity: 224
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 43, 182

Conread position: 173-512
Cow position:
Alignm length: 347
Alignm identity: 240
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 55, 42

Conread position: 174-474
Cow position:
Alignm length: 307
Alignm identity: 214
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 36, 56

Conread position: 175-437
Cow position:
Alignm length: 271
Alignm identity: 186
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 40, 75

Conread position: 175-474
Cow position:
Alignm length: 309
Alignm identity: 211
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 25, 169

Conread position: 177-460
Cow position:
Alignm length: 291
Alignm identity: 207
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 36, 160

Conread position: 180-489
Cow position:
Alignm length: 317
Alignm identity: 224
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 33, 177

Conread position: 182-503
Cow position:
Alignm length: 331
Alignm identity: 233
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 33, 177

Conread position: 186-522
Cow position:
Alignm length: 345
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 159

Conread position: 187-365
Cow position:
Alignm length: 187
Alignm identity: 134
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 155

Conread position: 187-419
Cow position:
Alignm length: 240
Alignm identity: 166
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 26, 61

Conread position: 187-431
Cow position:
Alignm length: 250
Alignm identity: 178
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 29, 168

Conread position: 187-439
Cow position:
Alignm length: 260
Alignm identity: 190
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 28, 170

Conread position: 187-441
Cow position:
Alignm length: 258
Alignm identity: 175
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 48, 28

Conread position: 187-445
Cow position:
Alignm length: 269
Alignm identity: 192
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 28, 147

Conread position: 187-473
Cow position:
Alignm length: 294
Alignm identity: 203
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 28, 170

Conread position: 187-489
Cow position:
Alignm length: 310
Alignm identity: 215
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 28, 170

Conread position: 187-489
Cow position:
Alignm length: 310
Alignm identity: 209
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 28, 103

Conread position: 187-489
Cow position:
Alignm length: 311
Alignm identity: 218
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 28, 171

Conread position: 187-499
Cow position:
Alignm length: 323
Alignm identity: 224
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 28, 170

Conread position: 187-502
Cow position:
Alignm length: 323
Alignm identity: 222
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 28, 170

Conread position: 187-503
Cow position:
Alignm length: 325
Alignm identity: 234
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 28, 158

Conread position: 187-503
Cow position:
Alignm length: 325
Alignm identity: 227
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 28, 159

Conread position: 187-503
Cow position:
Alignm length: 326
Alignm identity: 229
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 28, 170

Conread position: 187-503
Cow position:
Alignm length: 324
Alignm identity: 228
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 28, 170

Conread position: 187-503
Cow position:
Alignm length: 325
Alignm identity: 225
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 28, 171

Conread position: 187-503
Cow position:
Alignm length: 324
Alignm identity: 232
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 28, 175

Conread position: 187-504
Cow position:
Alignm length: 323
Alignm identity: 221
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 25, 104

Conread position: 187-505
Cow position:
Alignm length: 321
Alignm identity: 227
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 28, 166

Conread position: 187-508
Cow position:
Alignm length: 331
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 155

Conread position: 188-445
Cow position:
Alignm length: 266
Alignm identity: 188
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 31, 25

Conread position: 188-503
Cow position:
Alignm length: 323
Alignm identity: 224
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 27, 168

Conread position: 188-523
Cow position:
Alignm length: 346
Alignm identity: 230
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 27, 170

Conread position: 188-552
Cow position:
Alignm length: 385
Alignm identity: 246
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 181

Conread position: 189-503
Cow position:
Alignm length: 322
Alignm identity: 220
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 26, 168

Conread position: 190-529
Cow position:
Alignm length: 343
Alignm identity: 224
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 45, 25

Conread position: 192-503
Cow position:
Alignm length: 319
Alignm identity: 228
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 20, 149

Conread position: 193-500
Cow position:
Alignm length: 314
Alignm identity: 217
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 22, 167

Conread position: 193-503
Cow position:
Alignm length: 319
Alignm identity: 222
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 22, 140

Conread position: 193-517
Cow position:
Alignm length: 327
Alignm identity: 217
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 93, 134

Conread position: 194-552
Cow position:
Alignm length: 365
Alignm identity: 243
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 96, 16

Conread position: 195-421
Cow position:
Alignm length: 233
Alignm identity: 160
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 20, 44

Conread position: 199-503
Cow position:
Alignm length: 308
Alignm identity: 215
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 95, 138

Conread position: 202-500
Cow position:
Alignm length: 301
Alignm identity: 212
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 92, 150

Conread position: 202-503
Cow position:
Alignm length: 304
Alignm identity: 214
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 92, 156

Conread position: 202-503
Cow position:
Alignm length: 302
Alignm identity: 209
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 55, 0

Conread position: 204-504
Cow position:
Alignm length: 305
Alignm identity: 208
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 6, 24

Conread position: 220-505
Cow position:
Alignm length: 288
Alignm identity: 205
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 75, 132

Conread position: 228-458
Cow position:
Alignm length: 234
Alignm identity: 169
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 58, 103

Conread position: 228-503
Cow position:
Alignm length: 278
Alignm identity: 191
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 66, 124

Conread position: 230-458
Cow position:
Alignm length: 231
Alignm identity: 165
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 56, 126

Conread position: 230-511
Cow position:
Alignm length: 293
Alignm identity: 198
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 54, 82

Conread position: 236-553
Cow position:
Alignm length: 325
Alignm identity: 214
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 20, 47

Conread position: 240-517
Cow position:
Alignm length: 279
Alignm identity: 199
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 206, 19

Conread position: 240-531
Cow position:
Alignm length: 294
Alignm identity: 191
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 162, 97

Conread position: 241-552
Cow position:
Alignm length: 317
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 45

Conread position: 245-520
Cow position:
Alignm length: 279
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 113

Conread position: 256-460
Cow position:
Alignm length: 206
Alignm identity: 143
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 35, 95

Conread position: 262-496
Cow position:
Alignm length: 238
Alignm identity: 163
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 12

Conread position: 276-529
Cow position:
Alignm length: 257
Alignm identity: 172
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 23, 99

Conread position: 277-551
Cow position:
Alignm length: 278
Alignm identity: 192
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 41, 79

Conread position: 286-478
Cow position:
Alignm length: 193
Alignm identity: 140
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 64, 0

Conread position: 291-550
Cow position:
Alignm length: 262
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 63

Conread position: 293-553
Cow position:
Alignm length: 269
Alignm identity: 198
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 39, 82

Conread position: 341-554
Cow position:
Alignm length: 219
Alignm identity: 150
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 162, 88

Conread position: 342-527
Cow position:
Alignm length: 190
Alignm identity: 137
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 37, 27

Conread position: 347-500
Cow position:
Alignm length: 154
Alignm identity: 116
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 411-546
Cow position:
Alignm length: 136
Alignm identity: 103
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 20, 0

Show alignments to all cow chromosomes.