Cow genome map

Conread name: Ss1.1-Pig4-TMW8027I19.5

Conread position: 163-460
Cow position: chr10:51951965-51952261 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 218
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 50, 194

Conread position: 167-504
Cow position: chr10:41774583-41774908 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 240
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 71, 48

Conread position: 167-508
Cow position: chr10:66899708-66900038 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 231
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 48, 122

Conread position: 168-344
Cow position: chr10:11684993-11685176 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 168-432
Cow position: chr10:47907582-47907319 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 194
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 47, 179

Conread position: 168-435
Cow position: chr10:14929533-14929272 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 192
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 49, 73

Conread position: 168-458
Cow position: chr10:19495627-19495920 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 215
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 42, 154

Conread position: 168-458
Cow position: chr10:21400019-21400305 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 216
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 47, 189

Conread position: 168-458
Cow position: chr10:21740100-21740386 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 206
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 47, 151

Conread position: 168-458
Cow position: chr10:41158099-41157813 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 216
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 47, 171

Conread position: 168-458
Cow position: chr10:41877572-41877284 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 212
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 47, 192

Conread position: 168-458
Cow position: chr10:55093918-55093631 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 216
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 45, 190

Conread position: 168-458
Cow position: chr10:64287697-64287991 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 215
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 15, 6

Conread position: 168-460
Cow position: chr10:5848975-5849265 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 210
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 47, 20

Conread position: 168-460
Cow position: chr10:11698895-11698604 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 212
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 47, 168

Conread position: 168-460
Cow position: chr10:28642185-28641900 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 76

Conread position: 168-460
Cow position: chr10:56065325-56065034 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 215
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 47, 168

Conread position: 168-464
Cow position: chr10:279956-280263 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 225
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 47, 223

Conread position: 168-468
Cow position: chr10:41567754-41567455 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 189

Conread position: 168-478
Cow position: chr10:14804486-14804185 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 233
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 47, 161

Conread position: 168-508
Cow position: chr10:32558006-32557669 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 234
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 51, 44

Conread position: 168-521
Cow position: chr10:26597270-26596918 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 245
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 47, 188

Conread position: 168-546
Cow position: chr10:39879705-39880097 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 102

Conread position: 168-549
Cow position: chr10:64302110-64302485 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 179

Conread position: 168-550
Cow position: chr10:11821424-11821044 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 212

Conread position: 168-552
Cow position: chr10:6259738-6260140 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 227

Conread position: 168-552
Cow position: chr10:28115450-28115821 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 275
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 44, 62

Conread position: 168-552
Cow position: chr10:41388454-41388843 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 257
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 47, 195

Conread position: 168-553
Cow position: chr10:24977108-24977485 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 168

Conread position: 169-551
Cow position: chr10:8326640-8327016 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 93

Conread position: 171-340
Cow position: chr10:24311697-24311873 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 146
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 45, 0

Conread position: 171-424
Cow position: chr10:14335200-14335444 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 185
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 123, 44

Conread position: 171-425
Cow position: chr10:39779883-39779636 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 120, 169

Conread position: 171-432
Cow position: chr10:4191589-4191849 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 193
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 44, 186

Conread position: 171-458
Cow position: chr10:39180434-39180149 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 212
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 44, 186

Conread position: 171-493
Cow position: chr10:31524750-31524430 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 221
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 44, 71

Conread position: 171-501
Cow position: chr10:25564613-25564933 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 234
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 44, 8

Conread position: 171-508
Cow position: chr10:21900133-21900459 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 238
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 48, 19

Conread position: 174-501
Cow position: chr10:54965482-54965798 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 228
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 18, 99

Conread position: 175-381
Cow position: chr10:57482403-57482605 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 158
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 41, 49

Conread position: 179-347
Cow position: chr10:29101937-29102111 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 36, 55

Conread position: 179-424
Cow position: chr10:60193312-60193074 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 166
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 116, 89

Conread position: 187-327
Cow position: chr10:125025-124878 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 187-433
Cow position: chr10:37771005-37770760 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 187
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 28, 170

Conread position: 187-445
Cow position: chr10:16926170-16925913 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 190
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 28, 170

Conread position: 187-448
Cow position: chr10:19714932-19715188 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 193
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 28, 168

Conread position: 187-453
Cow position: chr10:40151613-40151868 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 197
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 29, 148

Conread position: 187-474
Cow position: chr10:2120374-2120658 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 207
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 29, 170

Conread position: 187-500
Cow position: chr10:39040671-39040972 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 216
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 95, 15

Conread position: 187-503
Cow position: chr10:7281455-7281767 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 230
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 28, 170

Conread position: 187-503
Cow position: chr10:21487555-21487242 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 231
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 28, 170

Conread position: 187-503
Cow position: chr10:29846011-29846325 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 233
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 21, 148

Conread position: 187-503
Cow position: chr10:38344724-38345035 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 227
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 28, 167

Conread position: 187-503
Cow position: chr10:38537864-38538178 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 230
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 30, 170

Conread position: 187-503
Cow position: chr10:57989354-57989667 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 227
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 28, 170

Conread position: 189-517
Cow position: chr10:17432626-17432947 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 140

Conread position: 193-421
Cow position: chr10:1377874-1377647 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 22, 164

Conread position: 193-422
Cow position: chr10:41632257-41632039 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 37, 22

Conread position: 193-503
Cow position: chr10:8290610-8290305 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 229
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 22, 143

Conread position: 193-509
Cow position: chr10:38545282-38545581 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 224
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 87

Conread position: 194-525
Cow position: chr10:14861871-14861561 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 222
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 307, 26

Conread position: 196-503
Cow position: chr10:62408226-62408524 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 218
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 98, 6

Conread position: 202-460
Cow position: chr10:32578900-32578649 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 178
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 91, 150

Conread position: 202-470
Cow position: chr10:30684895-30685155 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 189
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 89, 150

Conread position: 205-512
Cow position: chr10:16476856-16476560 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 213
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 23, 138

Conread position: 211-510
Cow position: chr10:21077501-21077214 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 218
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 259, 34

Conread position: 214-435
Cow position: chr10:39815886-39816100 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 72, 117

Conread position: 228-512
Cow position: chr10:32065183-32064900 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 206
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 54, 99

Conread position: 234-514
Cow position: chr10:32316097-32316377 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 182
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 60, 123

Conread position: 239-474
Cow position: chr10:28930809-28931038 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 71, 0

Conread position: 239-501
Cow position: chr10:54978679-54978925 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 178
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 246-551
Cow position: chr10:44294344-44294641 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 210
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 48, 110

Conread position: 262-526
Cow position: chr10:38848270-38848016 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 177
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 92, 0

Conread position: 341-522
Cow position: chr10:42110818-42110642 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 342-552
Cow position: chr10:42749253-42749047 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 344-489
Cow position: chr10:25359882-25359739 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 31, 0

Show alignments to all cow chromosomes.