Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8027I19.5
        

               Conread position:
               93-207
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               161-504
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               54, 109
               

               Conread position:
               165-500
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               8, 18
               

               Conread position:
               167-550
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               276
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               11, 6
               

               Conread position:
               168-362
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               41, 168
               

               Conread position:
               168-412
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               47, 102
               

               Conread position:
               168-420
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-426
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               47, 147
               

               Conread position:
               168-431
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               47, 150
               

               Conread position:
               168-432
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               198
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-432
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               201
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               47, 32
               

               Conread position:
               168-432
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               199
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               47, 168
               

               Conread position:
               168-445
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               48, 154
               

               Conread position:
               168-445
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               47, 168
               

               Conread position:
               168-458
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               212
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               64, 47
               

               Conread position:
               168-458
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               47, 198
               

               Conread position:
               168-458
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               214
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               217
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               47, 191
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               213
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               47, 168
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               214
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               118, 66
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               215
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               47, 168
               

               Conread position:
               168-464
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 188
               

               Conread position:
               168-474
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               217
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               47, 167
               

               Conread position:
               168-502
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               40, 145
               

               Conread position:
               168-502
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               47, 169
               

               Conread position:
               168-550
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               168-552
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 340
               

               Conread position:
               168-552
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               260
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               134, 97
               

               Conread position:
               169-451
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               46, 194
               

               Conread position:
               169-458
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               219
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               14, 62
               

               Conread position:
               169-520
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               242
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               17, 106
               

               Conread position:
               171-375
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               17, 48
               

               Conread position:
               171-376
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               171-458
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               44, 98
               

               Conread position:
               171-458
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               214
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               44, 74
               

               Conread position:
               171-460
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               212
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               44, 186
               

               Conread position:
               172-521
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 165
               

               Conread position:
               173-536
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 42
               

               Conread position:
               174-474
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               214
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               120, 37
               

               Conread position:
               177-381
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               56, 38
               

               Conread position:
               177-531
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               250
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               55, 38
               

               Conread position:
               178-348
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               37, 81
               

               Conread position:
               187-345
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               187-346
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               187-365
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               26, 85
               

               Conread position:
               187-432
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               22, 153
               

               Conread position:
               187-445
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               28, 133
               

               Conread position:
               187-445
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               194
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               28, 83
               

               Conread position:
               187-474
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               28, 155
               

               Conread position:
               187-490
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               28, 78
               

               Conread position:
               187-499
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               25, 148
               

               Conread position:
               187-499
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               232
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               28, 158
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               229
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               28, 58
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               232
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               29, 170
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               230
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               26, 170
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               28, 170
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               229
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               28, 158
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               226
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               28, 170
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               28, 169
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               229
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               28, 170
               

               Conread position:
               188-413
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               106, 71
               

               Conread position:
               188-463
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               19, 52
               

               Conread position:
               188-496
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               29, 143
               

               Conread position:
               188-500
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               223
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               27, 169
               

               Conread position:
               188-503
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               230
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               27, 150
               

               Conread position:
               192-507
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               223
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               24, 190
               

               Conread position:
               193-493
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               96, 129
               

               Conread position:
               193-503
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               219
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               22, 165
               

               Conread position:
               202-474
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               192
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               92, 150
               

               Conread position:
               202-503
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               218
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               92, 63
               

               Conread position:
               202-507
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               84, 129
               

               Conread position:
               211-503
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               84, 141
               

               Conread position:
               211-509
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               75, 35
               

               Conread position:
               214-510
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               72, 51
               

               Conread position:
               223-517
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               65, 55
               

               Conread position:
               228-504
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               67, 46
               

               Conread position:
               230-542
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               65, 110
               

               Conread position:
               241-504
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               52, 105
               

               Conread position:
               246-458
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               40, 106
               

               Conread position:
               339-501
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               108, 35
               

               Conread position:
               345-506
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               114, 30
               

               Conread position:
               346-530
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               100, 28
               
Show alignments to all cow chromosomes.