Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8027I19.5 |
| Conread position: | 102-460 |
| Cow position: | chr12:33986805-33986448 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 25, 234 |
| Conread position: | 163-318 |
| Cow position: | chr12:21942322-21942159 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 168-365 |
| Cow position: | chr12:36427816-36427611 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 168-365 |
| Cow position: | chr12:36449159-36448953 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 168-365 |
| Cow position: | chr12:36479754-36479549 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 168-458 |
| Cow position: | chr12:43030810-43031094 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 45, 171 |
| Conread position: | 168-460 |
| Cow position: | chr12:4157954-4157663 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 215 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 47, 168 |
| Conread position: | 168-460 |
| Cow position: | chr12:8197793-8197502 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 216 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 47, 168 |
| Conread position: | 168-460 |
| Cow position: | chr12:37559127-37558842 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 47, 102 |
| Conread position: | 169-437 |
| Cow position: | chr12:17979314-17979067 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 171-512 |
| Cow position: | chr12:10485632-10485296 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 229 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 44, 21 |
| Conread position: | 171-552 |
| Cow position: | chr12:1869870-1869483 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 263 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 9, 46 |
| Conread position: | 172-461 |
| Cow position: | chr12:32654116-32653829 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 43, 70 |
| Conread position: | 172-506 |
| Cow position: | chr12:2283138-2282800 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 43, 72 |
| Conread position: | 174-549 |
| Cow position: | chr12:23162731-23163088 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 245 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 167, 91 |
| Conread position: | 187-458 |
| Cow position: | chr12:21427250-21426985 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 28, 169 |
| Conread position: | 187-473 |
| Cow position: | chr12:27855402-27855679 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 16, 99 |
| Conread position: | 187-494 |
| Cow position: | chr12:28765458-28765764 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 227 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 29, 170 |
| Conread position: | 187-503 |
| Cow position: | chr12:1403052-1402742 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 226 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 26, 155 |
| Conread position: | 187-503 |
| Cow position: | chr12:22205183-22205496 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 29, 170 |
| Conread position: | 187-503 |
| Cow position: | chr12:25100497-25100809 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 28, 170 |
| Conread position: | 187-509 |
| Cow position: | chr12:3631305-3631618 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 21, 82 |
| Conread position: | 188-365 |
| Cow position: | chr12:36367393-36367208 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 188-432 |
| Cow position: | chr12:16822032-16821789 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 27, 148 |
| Conread position: | 188-507 |
| Cow position: | chr12:21198520-21198208 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 27, 85 |
| Conread position: | 193-485 |
| Cow position: | chr12:14662073-14662367 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 22, 144 |
| Conread position: | 195-445 |
| Cow position: | chr12:6406099-6406343 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 99, 157 |
| Conread position: | 199-439 |
| Cow position: | chr12:8677550-8677775 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 11, 85 |
| Conread position: | 202-459 |
| Cow position: | chr12:42859284-42859535 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 193 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 93, 20 |
| Conread position: | 202-503 |
| Cow position: | chr12:11098785-11098494 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 93, 150 |
| Conread position: | 204-503 |
| Cow position: | chr12:27932396-27932693 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 6, 19 |
| Conread position: | 211-409 |
| Cow position: | chr12:600824-601024 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 80, 158 |
| Conread position: | 211-458 |
| Cow position: | chr12:21254135-21254366 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 75, 116 |
| Conread position: | 238-458 |
| Cow position: | chr12:3361416-3361195 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 55, 215 |
Show alignments to all cow chromosomes.