Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8027I19.5
        

               Conread position:
               12-528
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 20
               

               Conread position:
               47-499
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               296
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               48, 35
               

               Conread position:
               163-425
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               52, 68
               

               Conread position:
               168-432
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               200
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               47, 190
               

               Conread position:
               168-441
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               201
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               40, 20
               

               Conread position:
               168-443
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-458
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               213
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               47, 172
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               214
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               47, 160
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               217
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               47, 172
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               48, 171
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               220
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-476
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               219
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               47, 24
               

               Conread position:
               168-496
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               232
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-503
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               33, 172
               

               Conread position:
               168-527
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               251
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               47, 77
               

               Conread position:
               168-527
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               64, 47
               

               Conread position:
               169-523
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               14, 50
               

               Conread position:
               171-420
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               45, 99
               

               Conread position:
               171-421
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               44, 11
               

               Conread position:
               171-432
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               113, 169
               

               Conread position:
               171-460
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               209
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               44, 163
               

               Conread position:
               171-496
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               44, 202
               

               Conread position:
               171-520
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 211
               

               Conread position:
               171-525
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               44, 124
               

               Conread position:
               171-537
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 60
               

               Conread position:
               173-502
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               50, 185
               

               Conread position:
               173-507
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 27
               

               Conread position:
               173-550
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 218
               

               Conread position:
               175-429
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 17
               

               Conread position:
               175-512
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 253
               

               Conread position:
               177-521
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 178
               

               Conread position:
               178-553
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 182
               

               Conread position:
               180-426
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               41, 176
               

               Conread position:
               182-438
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               190
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               33, 84
               

               Conread position:
               187-445
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               29, 170
               

               Conread position:
               187-474
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               211
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               26, 169
               

               Conread position:
               187-474
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               44, 29
               

               Conread position:
               187-498
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               28, 213
               

               Conread position:
               187-500
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               28, 170
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               228
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               24, 169
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               26, 126
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               231
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               28, 100
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               230
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               28, 158
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               232
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               28, 133
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               28, 149
               

               Conread position:
               187-528
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               9, 146
               

               Conread position:
               188-431
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               98, 21
               

               Conread position:
               188-433
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               27, 171
               

               Conread position:
               188-489
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               27, 148
               

               Conread position:
               188-492
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               18, 82
               

               Conread position:
               188-512
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               27, 170
               

               Conread position:
               188-532
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               189-503
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               26, 168
               

               Conread position:
               192-503
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               18, 140
               

               Conread position:
               193-431
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               22, 141
               

               Conread position:
               193-437
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               22, 164
               

               Conread position:
               193-503
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               227
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               23, 164
               

               Conread position:
               208-460
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               78, 144
               

               Conread position:
               211-434
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               75, 142
               

               Conread position:
               211-541
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               49, 22
               

               Conread position:
               222-485
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               64, 108
               

               Conread position:
               228-525
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               185, 126
               

               Conread position:
               228-525
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               72, 102
               

               Conread position:
               229-571
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               38, 105
               

               Conread position:
               230-537
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               56, 35
               

               Conread position:
               231-527
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               63, 109
               

               Conread position:
               246-504
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               49, 87
               

               Conread position:
               258-513
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               28, 82
               

               Conread position:
               265-503
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               286-503
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               64, 0
               
Show alignments to all cow chromosomes.