Cow genome map

Conread name: Ss1.1-Pig4-TMW8027I19.5

Conread position: 113-527
Cow position: chr15:17218114-17218519 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 274
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 97, 223

Conread position: 120-525
Cow position: chr15:7965670-7966082 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 19

Conread position: 163-432
Cow position: chr15:1834227-1834491 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 201
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 10, 139

Conread position: 163-503
Cow position: chr15:18576959-18576622 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 242
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 18, 179

Conread position: 163-550
Cow position: chr15:30811235-30810860 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 97

Conread position: 165-516
Cow position: chr15:7983784-7984122 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 245
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 23, 80

Conread position: 167-539
Cow position: chr15:6623328-6622963 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 265
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 49, 12

Conread position: 168-337
Cow position: chr15:32673152-32672974 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 141
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 37, 0

Conread position: 168-351
Cow position: chr15:7055163-7054981 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 27, 57

Conread position: 168-362
Cow position: chr15:789338-789540 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 47, 168

Conread position: 168-388
Cow position: chr15:32711334-32711117 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 46, 187

Conread position: 168-432
Cow position: chr15:5980598-5980333 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 198
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 44, 177

Conread position: 168-440
Cow position: chr15:32720501-32720774 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 194
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 45, 167

Conread position: 168-441
Cow position: chr15:35647428-35647699 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 193
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 47, 14

Conread position: 168-445
Cow position: chr15:3889116-3888836 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 199
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 33, 194

Conread position: 168-445
Cow position: chr15:4142584-4142860 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 207
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 47, 189

Conread position: 168-445
Cow position: chr15:4671672-4671394 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 199
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 46, 168

Conread position: 168-445
Cow position: chr15:7893996-7894269 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 201
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 18, 163

Conread position: 168-458
Cow position: chr15:444839-444555 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 212
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 47, 70

Conread position: 168-458
Cow position: chr15:3009618-3009903 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 215
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 41, 171

Conread position: 168-460
Cow position: chr15:56723-56429 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 192
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 47, 164

Conread position: 168-460
Cow position: chr15:1882272-1882563 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 216
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 47, 168

Conread position: 168-460
Cow position: chr15:4196696-4196408 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 207
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 47, 189

Conread position: 168-460
Cow position: chr15:28489914-28490198 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 209
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 118, 184

Conread position: 168-464
Cow position: chr15:18267753-18268045 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 218
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 47, 189

Conread position: 168-478
Cow position: chr15:50123708-50124011 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 222
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 47, 189

Conread position: 168-478
Cow position: chr15:50147301-50147009 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 220
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 47, 102

Conread position: 168-496
Cow position: chr15:17079969-17080289 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 229
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 47, 36

Conread position: 168-503
Cow position: chr15:6155709-6156045 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 233
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 48, 207

Conread position: 168-511
Cow position: chr15:10888852-10888516 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 233
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 33, 190

Conread position: 168-511
Cow position: chr15:35735810-35735476 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 233
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 45, 102

Conread position: 168-551
Cow position: chr15:2413328-2413716 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 265
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 45, 205

Conread position: 168-552
Cow position: chr15:498994-498606 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 63

Conread position: 169-445
Cow position: chr15:2647422-2647698 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 204
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 46, 188

Conread position: 169-460
Cow position: chr15:1772733-1772441 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 214
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 14, 190

Conread position: 169-552
Cow position: chr15:9430176-9429796 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 266
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 19, 165

Conread position: 170-445
Cow position: chr15:7545115-7544845 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 191
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 143

Conread position: 171-329
Cow position: chr15:6326089-6326246 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 123, 14

Conread position: 171-365
Cow position: chr15:691005-690806 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 44, 97

Conread position: 171-460
Cow position: chr15:1518919-1519207 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 208
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 38, 167

Conread position: 171-472
Cow position: chr15:6471688-6471986 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 216
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 44, 165

Conread position: 171-474
Cow position: chr15:7934561-7934265 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 211
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 40, 184

Conread position: 171-489
Cow position: chr15:1764328-1764011 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 218
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 42, 188

Conread position: 171-494
Cow position: chr15:8099712-8099399 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 224
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 42, 161

Conread position: 171-496
Cow position: chr15:51715195-51714869 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 231
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 42, 175

Conread position: 171-499
Cow position: chr15:7260857-7260539 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 227
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 115, 25

Conread position: 171-512
Cow position: chr15:12420929-12421270 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 241
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 44, 186

Conread position: 171-514
Cow position: chr15:32507401-32507747 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 240
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 38, 45

Conread position: 171-552
Cow position: chr15:16508223-16507841 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 270
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 44, 91

Conread position: 171-552
Cow position: chr15:21449920-21449553 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 250
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 351, 42

Conread position: 172-485
Cow position: chr15:44829030-44828717 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 218
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 43, 185

Conread position: 173-345
Cow position: chr15:4926460-4926283 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 58

Conread position: 173-500
Cow position: chr15:315626-315948 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 225
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 41, 103

Conread position: 173-530
Cow position: chr15:36626051-36626415 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 255
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 42, 160

Conread position: 175-550
Cow position: chr15:20356683-20357045 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 49

Conread position: 177-428
Cow position: chr15:14634655-14634399 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 19

Conread position: 177-494
Cow position: chr15:328651-328344 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 214
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 111, 32

Conread position: 180-503
Cow position: chr15:32480657-32480981 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 223
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 34, 11

Conread position: 182-440
Cow position: chr15:368948-369192 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 173
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 182-500
Cow position: chr15:17292668-17292349 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 91

Conread position: 185-509
Cow position: chr15:4961862-4961545 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 224
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 30, 146

Conread position: 186-408
Cow position: chr15:24794569-24794350 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 24, 147

Conread position: 187-346
Cow position: chr15:38980885-38980719 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 187-381
Cow position: chr15:6553599-6553801 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 187-430
Cow position: chr15:3261114-3261355 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 178
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 28, 22

Conread position: 187-473
Cow position: chr15:2076868-2076585 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 211
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 28, 186

Conread position: 187-480
Cow position: chr15:4765426-4765134 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 204
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 28, 170

Conread position: 187-503
Cow position: chr15:15346899-15347211 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 228
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 29, 169

Conread position: 187-503
Cow position: chr15:19737832-19738145 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 230
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 29, 170

Conread position: 187-503
Cow position: chr15:24295315-24295000 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 232
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 29, 174

Conread position: 187-505
Cow position: chr15:687149-686815 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 229
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 28, 83

Conread position: 187-505
Cow position: chr15:44070143-44069831 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 220
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 28, 160

Conread position: 187-521
Cow position: chr15:19818181-19817863 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 238
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 30, 54

Conread position: 188-499
Cow position: chr15:37392709-37392400 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 218
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 27, 146

Conread position: 188-503
Cow position: chr15:4385483-4385176 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 220
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 27, 103

Conread position: 188-503
Cow position: chr15:18332610-18332920 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 222
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 24, 126

Conread position: 188-503
Cow position: chr15:51216805-51216497 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 227
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 25, 51

Conread position: 188-509
Cow position: chr15:8750640-8750328 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 225
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 27, 148

Conread position: 188-537
Cow position: chr15:3842203-3842564 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 240
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 9, 64

Conread position: 188-538
Cow position: chr15:5103263-5103608 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 231
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 76, 155

Conread position: 188-550
Cow position: chr15:7787488-7787847 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 252
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 27, 148

Conread position: 189-525
Cow position: chr15:32673334-32673659 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 231
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 26, 146

Conread position: 189-552
Cow position: chr15:33644585-33644943 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 234
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 34, 158

Conread position: 192-460
Cow position: chr15:36971131-36970867 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 194
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 23, 140

Conread position: 193-426
Cow position: chr15:14582141-14582368 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 168
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 164

Conread position: 193-429
Cow position: chr15:4812814-4812582 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 22, 58

Conread position: 193-499
Cow position: chr15:21665531-21665838 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 228
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 23, 164

Conread position: 199-474
Cow position: chr15:32494182-32494451 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 197
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 11, 154

Conread position: 202-431
Cow position: chr15:524660-524883 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 176
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 92, 138

Conread position: 202-445
Cow position: chr15:7837445-7837208 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 178
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 92, 150

Conread position: 202-489
Cow position: chr15:4922351-4922072 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 201
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 93, 150

Conread position: 202-499
Cow position: chr15:35753396-35753690 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 207
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 53, 64

Conread position: 211-460
Cow position: chr15:42320236-42320478 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 178
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 83, 140

Conread position: 211-503
Cow position: chr15:31359078-31358794 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 215
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 71, 126

Conread position: 220-460
Cow position: chr15:36077424-36077190 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 66, 111

Conread position: 228-460
Cow position: chr15:29010008-29009782 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 168
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 58, 105

Conread position: 232-431
Cow position: chr15:7234468-7234277 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 54, 120

Conread position: 241-551
Cow position: chr15:2802007-2802315 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 205
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 26, 87

Conread position: 250-445
Cow position: chr15:2012227-2012038 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 84

Conread position: 284-425
Cow position: chr15:21457060-21456926 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 294-521
Cow position: chr15:7929558-7929350 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 310-554
Cow position: chr15:1254978-1254723 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 179
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 34, 68

Conread position: 339-508
Cow position: chr15:11298329-11298495 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 416-552
Cow position: chr15:14634065-14633932 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 76, 0

Show alignments to all cow chromosomes.