Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8027I19.5
        

               Conread position:
               113-527
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               274
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               97, 223
               

               Conread position:
               120-525
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 19
               

               Conread position:
               163-432
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               10, 139
               

               Conread position:
               163-503
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               242
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               18, 179
               

               Conread position:
               163-550
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 97
               

               Conread position:
               165-516
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               23, 80
               

               Conread position:
               167-539
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               265
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               49, 12
               

               Conread position:
               168-337
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               168-351
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               27, 57
               

               Conread position:
               168-362
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               47, 168
               

               Conread position:
               168-388
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               46, 187
               

               Conread position:
               168-432
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               44, 177
               

               Conread position:
               168-440
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               45, 167
               

               Conread position:
               168-441
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               47, 14
               

               Conread position:
               168-445
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               33, 194
               

               Conread position:
               168-445
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               207
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-445
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               46, 168
               

               Conread position:
               168-445
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               18, 163
               

               Conread position:
               168-458
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               47, 70
               

               Conread position:
               168-458
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               215
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               41, 171
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               47, 164
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               216
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               47, 168
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               209
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               118, 184
               

               Conread position:
               168-464
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               218
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-478
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-478
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               47, 102
               

               Conread position:
               168-496
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               47, 36
               

               Conread position:
               168-503
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               233
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               48, 207
               

               Conread position:
               168-511
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               233
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               33, 190
               

               Conread position:
               168-511
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               233
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               45, 102
               

               Conread position:
               168-551
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               265
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               45, 205
               

               Conread position:
               168-552
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 63
               

               Conread position:
               169-445
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               204
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               46, 188
               

               Conread position:
               169-460
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               14, 190
               

               Conread position:
               169-552
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               266
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               19, 165
               

               Conread position:
               170-445
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               38, 143
               

               Conread position:
               171-329
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               123, 14
               

               Conread position:
               171-365
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               44, 97
               

               Conread position:
               171-460
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               38, 167
               

               Conread position:
               171-472
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               216
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               44, 165
               

               Conread position:
               171-474
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               211
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               40, 184
               

               Conread position:
               171-489
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               42, 188
               

               Conread position:
               171-494
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               224
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               42, 161
               

               Conread position:
               171-496
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               42, 175
               

               Conread position:
               171-499
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               227
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               115, 25
               

               Conread position:
               171-512
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               241
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               44, 186
               

               Conread position:
               171-514
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               240
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               38, 45
               

               Conread position:
               171-552
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               270
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               44, 91
               

               Conread position:
               171-552
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               250
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               351, 42
               

               Conread position:
               172-485
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               43, 185
               

               Conread position:
               173-345
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               43, 58
               

               Conread position:
               173-500
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               41, 103
               

               Conread position:
               173-530
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               255
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               42, 160
               

               Conread position:
               175-550
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 49
               

               Conread position:
               177-428
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 19
               

               Conread position:
               177-494
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               111, 32
               

               Conread position:
               180-503
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               34, 11
               

               Conread position:
               182-440
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               182-500
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 91
               

               Conread position:
               185-509
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               30, 146
               

               Conread position:
               186-408
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               24, 147
               

               Conread position:
               187-346
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               187-381
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               187-430
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               28, 22
               

               Conread position:
               187-473
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               211
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               28, 186
               

               Conread position:
               187-480
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               28, 170
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               228
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               29, 169
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               230
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               29, 170
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               232
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               29, 174
               

               Conread position:
               187-505
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               229
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               28, 83
               

               Conread position:
               187-505
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               28, 160
               

               Conread position:
               187-521
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               30, 54
               

               Conread position:
               188-499
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               27, 146
               

               Conread position:
               188-503
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               27, 103
               

               Conread position:
               188-503
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               222
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               24, 126
               

               Conread position:
               188-503
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               227
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               25, 51
               

               Conread position:
               188-509
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               27, 148
               

               Conread position:
               188-537
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               240
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               9, 64
               

               Conread position:
               188-538
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               76, 155
               

               Conread position:
               188-550
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               252
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               27, 148
               

               Conread position:
               189-525
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               231
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               26, 146
               

               Conread position:
               189-552
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               234
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               34, 158
               

               Conread position:
               192-460
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               23, 140
               

               Conread position:
               193-426
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               22, 164
               

               Conread position:
               193-429
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               22, 58
               

               Conread position:
               193-499
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               228
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               23, 164
               

               Conread position:
               199-474
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               11, 154
               

               Conread position:
               202-431
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               92, 138
               

               Conread position:
               202-445
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               92, 150
               

               Conread position:
               202-489
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               93, 150
               

               Conread position:
               202-499
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               53, 64
               

               Conread position:
               211-460
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               83, 140
               

               Conread position:
               211-503
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               215
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               71, 126
               

               Conread position:
               220-460
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               66, 111
               

               Conread position:
               228-460
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               58, 105
               

               Conread position:
               232-431
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               54, 120
               

               Conread position:
               241-551
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               205
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               26, 87
               

               Conread position:
               250-445
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               44, 84
               

               Conread position:
               284-425
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               294-521
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               310-554
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               34, 68
               

               Conread position:
               339-508
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               416-552
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               76, 0
               
Show alignments to all cow chromosomes.