Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8027I19.5
        

               Conread position:
               83-460
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               60, 13
               

               Conread position:
               153-553
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               267
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               15, 116
               

               Conread position:
               163-458
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               221
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               52, 194
               

               Conread position:
               165-398
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               168-316
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               48, 127
               

               Conread position:
               168-349
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               47, 168
               

               Conread position:
               168-386
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               168-433
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               40, 176
               

               Conread position:
               168-458
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               47, 188
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               35, 103
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               215
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               215
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-512
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 23
               

               Conread position:
               168-519
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               239
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               41, 64
               

               Conread position:
               168-552
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               266
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               47, 102
               

               Conread position:
               169-552
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               255
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               13, 135
               

               Conread position:
               171-445
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               120, 94
               

               Conread position:
               171-445
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               45, 66
               

               Conread position:
               171-498
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               238
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               38, 165
               

               Conread position:
               172-509
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               22, 100
               

               Conread position:
               172-512
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               43, 101
               

               Conread position:
               173-330
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               173-499
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               42, 173
               

               Conread position:
               173-500
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               230
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               41, 184
               

               Conread position:
               173-511
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 206
               

               Conread position:
               177-547
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               5, 168
               

               Conread position:
               179-426
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               21, 168
               

               Conread position:
               180-503
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 179
               

               Conread position:
               187-362
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               187-415
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               28, 159
               

               Conread position:
               187-433
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               28, 160
               

               Conread position:
               187-439
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               112, 156
               

               Conread position:
               187-441
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               28, 57
               

               Conread position:
               187-500
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               28, 148
               

               Conread position:
               187-500
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               231
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               28, 170
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               230
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               28, 152
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               28, 149
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               28, 152
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               28, 160
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               230
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               28, 170
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               227
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               28, 169
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               25, 58
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 170
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               232
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               28, 150
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 151
               

               Conread position:
               187-529
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               48, 28
               

               Conread position:
               188-445
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               28, 166
               

               Conread position:
               188-489
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               218
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               27, 174
               

               Conread position:
               188-503
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               229
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               27, 169
               

               Conread position:
               188-503
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               225
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               27, 169
               

               Conread position:
               188-514
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               27, 169
               

               Conread position:
               188-531
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               27, 168
               

               Conread position:
               189-505
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               225
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               26, 166
               

               Conread position:
               193-503
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               102, 22
               

               Conread position:
               194-528
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               70, 170
               

               Conread position:
               202-489
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               93, 150
               

               Conread position:
               202-520
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               84, 154
               

               Conread position:
               202-528
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               208-412
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               228-552
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               64, 40
               

               Conread position:
               268-513
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               27, 84
               

               Conread position:
               272-496
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               32, 69
               

               Conread position:
               346-550
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               150, 27
               
Show alignments to all cow chromosomes.