Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8027I19.5 |
| Conread position: | 163-440 |
| Cow position: | chr18:33269509-33269233 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 198 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 10, 196 |
| Conread position: | 163-503 |
| Cow position: | chr18:14131074-14130736 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 243 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 52, 194 |
| Conread position: | 168-444 |
| Cow position: | chr18:51462408-51462682 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 208 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 46, 189 |
| Conread position: | 168-445 |
| Cow position: | chr18:22603157-22602883 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 47, 166 |
| Conread position: | 168-445 |
| Cow position: | chr18:51661017-51660743 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 206 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 47, 103 |
| Conread position: | 168-458 |
| Cow position: | chr18:11274434-11274720 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 189 |
| Conread position: | 168-458 |
| Cow position: | chr18:55088248-55088538 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 47, 169 |
| Conread position: | 168-460 |
| Cow position: | chr18:33952905-33953194 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 41, 175 |
| Conread position: | 168-478 |
| Cow position: | chr18:51342358-51342055 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 189 |
| Conread position: | 168-487 |
| Cow position: | chr18:19353043-19352736 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 47, 157 |
| Conread position: | 168-503 |
| Cow position: | chr18:14416657-14416322 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 47, 167 |
| Conread position: | 168-518 |
| Cow position: | chr18:29765651-29765300 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 249 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 47, 168 |
| Conread position: | 171-438 |
| Cow position: | chr18:51238970-51238703 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 50, 102 |
| Conread position: | 171-509 |
| Cow position: | chr18:54170863-54171198 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 237 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 45, 167 |
| Conread position: | 171-512 |
| Cow position: | chr18:15856061-15855722 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 44, 68 |
| Conread position: | 171-537 |
| Cow position: | chr18:33750687-33750324 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 45, 166 |
| Conread position: | 172-460 |
| Cow position: | chr18:24040057-24040351 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 210 |
| Conread position: | 173-442 |
| Cow position: | chr18:54271172-54270913 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 175-381 |
| Cow position: | chr18:51275366-51275584 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 175-489 |
| Cow position: | chr18:33336537-33336222 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 232 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 7, 159 |
| Conread position: | 181-537 |
| Cow position: | chr18:46867905-46868247 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 248 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 114, 62 |
| Conread position: | 187-488 |
| Cow position: | chr18:51481493-51481195 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 29, 140 |
| Conread position: | 187-489 |
| Cow position: | chr18:28973230-28973543 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 28, 201 |
| Conread position: | 187-503 |
| Cow position: | chr18:23798301-23797994 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 48, 28 |
| Conread position: | 187-503 |
| Cow position: | chr18:36508992-36508679 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 227 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 28, 58 |
| Conread position: | 187-503 |
| Cow position: | chr18:40479042-40478729 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 229 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 28, 170 |
| Conread position: | 188-499 |
| Cow position: | chr18:8169359-8169054 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 14 |
| Conread position: | 188-499 |
| Cow position: | chr18:37505716-37505410 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 25, 166 |
| Conread position: | 193-445 |
| Cow position: | chr18:16088799-16088548 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 22, 152 |
| Conread position: | 194-503 |
| Cow position: | chr18:27837664-27837970 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 225 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 21, 145 |
| Conread position: | 194-514 |
| Cow position: | chr18:40197637-40197312 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 46, 20 |
| Conread position: | 199-503 |
| Cow position: | chr18:52651561-52651266 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 11, 154 |
| Conread position: | 202-445 |
| Cow position: | chr18:16175978-16176216 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 93, 63 |
| Conread position: | 202-489 |
| Cow position: | chr18:27987703-27987423 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 92, 130 |
| Conread position: | 211-493 |
| Cow position: | chr18:54023510-54023769 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 228-500 |
| Cow position: | chr18:41840211-41840475 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 67, 124 |
| Conread position: | 243-551 |
| Cow position: | chr18:46855209-46855516 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 95, 41 |
| Conread position: | 252-501 |
| Cow position: | chr18:32652790-32652549 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 43, 82 |
Show alignments to all cow chromosomes.