Cow genome map

Conread name: Ss1.1-Pig4-TMW8027I19.5

Conread position: 163-326
Cow position: chr2:12202799-12202962 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 123, 16

Conread position: 163-426
Cow position: chr2:42670862-42671125 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 189
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 18, 195

Conread position: 163-460
Cow position: chr2:80955509-80955809 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 222
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 7, 198

Conread position: 163-492
Cow position: chr2:22077911-22077580 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 247
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 7, 183

Conread position: 168-407
Cow position: chr2:41657293-41657063 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 170
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 45, 130

Conread position: 168-412
Cow position: chr2:14777706-14777942 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 175
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 116, 31

Conread position: 168-422
Cow position: chr2:72597725-72597477 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 180
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 47, 121

Conread position: 168-431
Cow position: chr2:50323326-50323067 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 184
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 47, 80

Conread position: 168-432
Cow position: chr2:25030362-25030621 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 196
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 47, 170

Conread position: 168-432
Cow position: chr2:59413563-59413825 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 195
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 47, 168

Conread position: 168-433
Cow position: chr2:16290459-16290196 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 194
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 47, 24

Conread position: 168-434
Cow position: chr2:52351829-52351564 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 11

Conread position: 168-445
Cow position: chr2:3324442-3324722 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 203
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 47, 171

Conread position: 168-445
Cow position: chr2:5474634-5474358 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 206
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 47, 168

Conread position: 168-445
Cow position: chr2:51990131-51990406 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 205
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 47, 188

Conread position: 168-448
Cow position: chr2:2088055-2088334 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 206
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 47, 168

Conread position: 168-458
Cow position: chr2:9908031-9907745 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 216
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 47, 189

Conread position: 168-458
Cow position: chr2:10611513-10611794 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 211
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 47, 155

Conread position: 168-458
Cow position: chr2:41686627-41686346 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 209
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 47, 79

Conread position: 168-458
Cow position: chr2:47038296-47038582 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 210
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 47, 171

Conread position: 168-458
Cow position: chr2:54737624-54737338 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 215
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 47, 168

Conread position: 168-458
Cow position: chr2:57335314-57335028 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 217
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 47, 189

Conread position: 168-458
Cow position: chr2:57588814-57588528 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 216
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 47, 189

Conread position: 168-460
Cow position: chr2:212104-212392 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 217
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 47, 189

Conread position: 168-460
Cow position: chr2:49472365-49472074 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 209
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 40, 189

Conread position: 168-460
Cow position: chr2:49590519-49590228 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 214
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 47, 168

Conread position: 168-478
Cow position: chr2:2381225-2380922 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 228
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 47, 168

Conread position: 168-478
Cow position: chr2:39421695-39421394 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 221
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 41, 187

Conread position: 168-485
Cow position: chr2:26921794-26921487 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 222
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 47, 131

Conread position: 168-485
Cow position: chr2:41172789-41172480 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 215
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 47, 189

Conread position: 168-491
Cow position: chr2:34938857-34938531 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 208
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 37, 211

Conread position: 168-497
Cow position: chr2:2412678-2413001 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 228
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 47, 167

Conread position: 168-503
Cow position: chr2:52062785-52062460 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 202
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 127, 166

Conread position: 168-523
Cow position: chr2:35355819-35355468 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 249
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 40, 174

Conread position: 168-550
Cow position: chr2:29030268-29029887 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 272
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 39, 105

Conread position: 168-551
Cow position: chr2:11692665-11692300 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 269
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 44, 116

Conread position: 169-440
Cow position: chr2:44934797-44935074 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 204
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 13, 166

Conread position: 169-498
Cow position: chr2:175408-175739 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 228
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 46, 189

Conread position: 171-426
Cow position: chr2:31297912-31297660 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 48, 174

Conread position: 171-445
Cow position: chr2:10732648-10732922 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 196
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 23, 187

Conread position: 171-445
Cow position: chr2:44991176-44991448 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 200
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 44, 67

Conread position: 171-458
Cow position: chr2:52616585-52616302 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 213
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 44, 186

Conread position: 171-474
Cow position: chr2:5813267-5813565 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 209
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 45, 165

Conread position: 171-503
Cow position: chr2:11159005-11159334 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 186

Conread position: 171-503
Cow position: chr2:36980496-36980168 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 235
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 45, 37

Conread position: 172-458
Cow position: chr2:4403043-4403325 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 215
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 43, 185

Conread position: 173-422
Cow position: chr2:76024886-76024653 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 184
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 13, 50

Conread position: 173-505
Cow position: chr2:10186116-10186440 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 233
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 35, 187

Conread position: 173-551
Cow position: chr2:45967847-45968214 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 26

Conread position: 175-445
Cow position: chr2:24922512-24922241 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 189
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 189

Conread position: 175-552
Cow position: chr2:45919448-45919828 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 172

Conread position: 178-489
Cow position: chr2:20902441-20902743 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 212
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 13, 24

Conread position: 182-432
Cow position: chr2:67419194-67419445 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 186
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 24, 177

Conread position: 187-430
Cow position: chr2:44091400-44091158 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 185
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 28, 170

Conread position: 187-432
Cow position: chr2:47603147-47603390 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 175
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 21, 41

Conread position: 187-444
Cow position: chr2:781338-781590 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 182
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 29, 104

Conread position: 187-445
Cow position: chr2:19011446-19011189 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 193
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 28, 158

Conread position: 187-498
Cow position: chr2:5904768-5905070 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 211
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 111, 39

Conread position: 187-503
Cow position: chr2:282587-282899 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 232
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 28, 170

Conread position: 187-503
Cow position: chr2:8118642-8118329 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 229
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 28, 170

Conread position: 187-503
Cow position: chr2:65938346-65938657 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 225
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 26, 170

Conread position: 187-510
Cow position: chr2:53329860-53329539 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 230
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 28, 169

Conread position: 188-445
Cow position: chr2:24146963-24146708 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 27, 168

Conread position: 188-506
Cow position: chr2:16900354-16900042 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 231
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 27, 169

Conread position: 189-547
Cow position: chr2:72681498-72681874 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 247
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 40, 26

Conread position: 189-571
Cow position: chr2:39622710-39622341 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 259
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 39, 26

Conread position: 191-426
Cow position: chr2:904118-903897 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 44, 24

Conread position: 193-431
Cow position: chr2:14823207-14822979 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 178
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 93, 72

Conread position: 193-445
Cow position: chr2:80292854-80293105 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 187
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 22, 146

Conread position: 193-474
Cow position: chr2:5870264-5870538 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 195
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 33, 42

Conread position: 193-503
Cow position: chr2:50077697-50077389 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 223
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 23, 150

Conread position: 193-506
Cow position: chr2:5484877-5485186 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 223
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 22, 152

Conread position: 199-365
Cow position: chr2:32065996-32066165 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 87, 164

Conread position: 200-474
Cow position: chr2:81256895-81256625 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 196
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 12, 143

Conread position: 202-502
Cow position: chr2:10268575-10268867 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 215
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 92, 24

Conread position: 202-503
Cow position: chr2:13045620-13045913 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 216
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 93, 150

Conread position: 202-503
Cow position: chr2:28793338-28793044 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 212
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 80, 129

Conread position: 202-516
Cow position: chr2:5962996-5963304 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 205
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 80, 150

Conread position: 211-499
Cow position: chr2:28650157-28650438 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 201
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 83, 141

Conread position: 211-503
Cow position: chr2:50983153-50983436 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 213
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 75, 120

Conread position: 211-554
Cow position: chr2:36052924-36053257 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 238
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 71, 122

Conread position: 211-554
Cow position: chr2:63978383-63978043 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 138

Conread position: 224-530
Cow position: chr2:49604995-49604698 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 207
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 69, 14

Conread position: 228-509
Cow position: chr2:198732-199002 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 194
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 58, 102

Conread position: 239-501
Cow position: chr2:69584578-69584833 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 178
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 112

Conread position: 243-505
Cow position: chr2:12224269-12224521 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 189
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 52, 109

Conread position: 251-504
Cow position: chr2:7903051-7902810 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 35, 101

Conread position: 256-534
Cow position: chr2:20873763-20874033 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 194
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 12, 84

Conread position: 259-501
Cow position: chr2:44497434-44497665 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 186
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 35, 7

Conread position: 347-548
Cow position: chr2:1363106-1362903 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 122, 27

Show alignments to all cow chromosomes.