Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8027I19.5
        

               Conread position:
               97-225
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               168-344
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               47, 168
               

               Conread position:
               168-346
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               47, 167
               

               Conread position:
               168-387
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 213
               

               Conread position:
               168-427
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               47, 169
               

               Conread position:
               168-445
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               47, 188
               

               Conread position:
               168-458
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               216
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               46, 190
               

               Conread position:
               168-458
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               219
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               47, 109
               

               Conread position:
               168-458
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               214
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               47, 187
               

               Conread position:
               168-458
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               219
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               41, 190
               

               Conread position:
               168-458
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               47, 188
               

               Conread position:
               168-458
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               44, 189
               

               Conread position:
               168-458
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               209
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               37, 168
               

               Conread position:
               168-458
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               47, 188
               

               Conread position:
               168-473
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               225
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               47, 190
               

               Conread position:
               168-498
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-525
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               40, 58
               

               Conread position:
               168-551
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               276
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               48, 212
               

               Conread position:
               168-552
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               267
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               18, 10
               

               Conread position:
               168-552
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 121
               

               Conread position:
               169-340
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               43, 67
               

               Conread position:
               169-460
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               46, 167
               

               Conread position:
               169-522
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               25, 177
               

               Conread position:
               169-536
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               245
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               124, 151
               

               Conread position:
               170-460
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               200
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               45, 166
               

               Conread position:
               171-443
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               33, 171
               

               Conread position:
               171-458
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               212
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               44, 186
               

               Conread position:
               171-470
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               37, 164
               

               Conread position:
               171-489
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               228
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               44, 176
               

               Conread position:
               171-492
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               123, 39
               

               Conread position:
               171-520
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               243
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               41, 69
               

               Conread position:
               171-547
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               247
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               29, 16
               

               Conread position:
               172-468
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               217
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               44, 164
               

               Conread position:
               173-407
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               187
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               42, 148
               

               Conread position:
               173-500
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               40, 172
               

               Conread position:
               173-503
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               232
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               42, 91
               

               Conread position:
               173-550
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 109
               

               Conread position:
               187-445
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               28, 170
               

               Conread position:
               187-480
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               211
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               27, 161
               

               Conread position:
               187-496
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               29, 103
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               222
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               28, 78
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               228
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               28, 146
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               227
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               28, 169
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               228
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               28, 170
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               229
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               28, 170
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               28, 148
               

               Conread position:
               187-537
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               251
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               28, 189
               

               Conread position:
               188-503
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               26, 169
               

               Conread position:
               189-510
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               23, 91
               

               Conread position:
               189-553
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               259
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               26, 185
               

               Conread position:
               192-553
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               253
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               23, 87
               

               Conread position:
               193-474
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               16, 78
               

               Conread position:
               202-503
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               218
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               89, 154
               

               Conread position:
               202-503
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               221
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               88, 151
               

               Conread position:
               211-445
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               83, 120
               

               Conread position:
               211-514
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               84, 145
               

               Conread position:
               211-537
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               75, 91
               

               Conread position:
               226-511
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 39
               

               Conread position:
               246-550
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 19
               

               Conread position:
               247-509
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               47, 105
               

               Conread position:
               270-553
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 8
               

               Conread position:
               271-552
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               144, 79
               

               Conread position:
               337-506
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               36, 0
               
Show alignments to all cow chromosomes.