Cow genome map

Conread name: Ss1.1-Pig4-TMW8027I19.5

Conread position: 42-470
Cow position: chr23:4435156-4434737 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 287
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 118, 27

Conread position: 163-503
Cow position: chr23:19490131-19489796 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 236
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 15, 7

Conread position: 163-505
Cow position: chr23:2716980-2716642 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 242
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 21, 195

Conread position: 168-365
Cow position: chr23:28367941-28368146 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 168-445
Cow position: chr23:31447394-31447118 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 204
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 47, 168

Conread position: 168-460
Cow position: chr23:2312661-2312951 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 215
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 47, 11

Conread position: 168-460
Cow position: chr23:23830539-23830254 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 209
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 46, 170

Conread position: 168-464
Cow position: chr23:28217869-28217576 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 223
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 41, 168

Conread position: 168-499
Cow position: chr23:17785743-17786067 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 237
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 47, 168

Conread position: 168-503
Cow position: chr23:5874070-5874391 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 221
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 41, 129

Conread position: 168-507
Cow position: chr23:3014979-3014641 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 236
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 47, 97

Conread position: 170-552
Cow position: chr23:16614855-16615238 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 262
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 44, 187

Conread position: 171-444
Cow position: chr23:2781632-2781903 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 203
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 44, 167

Conread position: 171-474
Cow position: chr23:16616263-16616565 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 220
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 44, 186

Conread position: 171-488
Cow position: chr23:20302777-20302470 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 226
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 115, 44

Conread position: 171-498
Cow position: chr23:19950009-19950329 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 244
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 12, 188

Conread position: 171-505
Cow position: chr23:14973981-14974312 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 238
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 44, 117

Conread position: 171-520
Cow position: chr23:7046067-7046427 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 244
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 11, 102

Conread position: 173-503
Cow position: chr23:14965171-14965498 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 234
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 40, 184

Conread position: 174-351
Cow position: chr23:22874610-22874793 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 174-550
Cow position: chr23:13510234-13509845 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 184

Conread position: 175-554
Cow position: chr23:26837231-26836862 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 84

Conread position: 180-503
Cow position: chr23:2341663-2341342 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 235
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 36, 167

Conread position: 186-503
Cow position: chr23:4510632-4510331 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 215
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 110, 65

Conread position: 187-426
Cow position: chr23:2794671-2794907 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 175
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 28, 69

Conread position: 187-432
Cow position: chr23:4817582-4817338 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 189
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 40, 28

Conread position: 187-460
Cow position: chr23:15219342-15219605 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 107, 169

Conread position: 187-489
Cow position: chr23:2758161-2757861 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 220
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 37, 28

Conread position: 187-500
Cow position: chr23:15177637-15177328 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 213
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 28, 170

Conread position: 187-500
Cow position: chr23:28913955-28913650 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 227
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 28, 108

Conread position: 187-502
Cow position: chr23:27400066-27399757 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 226
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 28, 172

Conread position: 187-503
Cow position: chr23:966775-967096 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 218
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 28, 151

Conread position: 187-503
Cow position: chr23:36030811-36031123 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 232
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 29, 176

Conread position: 188-365
Cow position: chr23:28108216-28108036 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 127
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 5, 28

Conread position: 193-502
Cow position: chr23:11779049-11778745 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 221
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 22, 164

Conread position: 193-552
Cow position: chr23:1401938-1402303 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 239
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 14, 146

Conread position: 195-500
Cow position: chr23:31594698-31594991 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 200
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 96, 69

Conread position: 199-346
Cow position: chr23:27971084-27970934 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 11, 143

Conread position: 202-512
Cow position: chr23:25683494-25683798 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 216
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 84, 55

Conread position: 202-513
Cow position: chr23:20155669-20155974 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 213
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 93, 154

Conread position: 211-365
Cow position: chr23:28077902-28077747 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 131, 0

Conread position: 213-445
Cow position: chr23:22146718-22146944 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 168
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 82, 143

Conread position: 242-458
Cow position: chr23:4360328-4360122 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 53, 109

Conread position: 245-503
Cow position: chr23:15526116-15525864 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 22, 108

Conread position: 255-500
Cow position: chr23:2575027-2574792 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 31, 55

Conread position: 256-503
Cow position: chr23:2026624-2026865 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 173
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 10, 98

Conread position: 292-501
Cow position: chr23:6217315-6217120 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 193, 23

Show alignments to all cow chromosomes.