Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8027I19.5 |
| Conread position: | 9-503 |
| Cow position: | chr25:17559848-17560342 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 320 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 132, 79 |
| Conread position: | 163-503 |
| Cow position: | chr25:18889381-18889719 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 195 |
| Conread position: | 168-342 |
| Cow position: | chr25:33258267-33258096 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 168-427 |
| Cow position: | chr25:20775304-20775557 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 119, 184 |
| Conread position: | 168-432 |
| Cow position: | chr25:27021948-27022205 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 47, 82 |
| Conread position: | 168-445 |
| Cow position: | chr25:32580585-32580310 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 209 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 40, 189 |
| Conread position: | 168-458 |
| Cow position: | chr25:17588932-17589219 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 47, 176 |
| Conread position: | 168-458 |
| Cow position: | chr25:18194479-18194763 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 47, 97 |
| Conread position: | 168-459 |
| Cow position: | chr25:19917705-19917415 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 47, 189 |
| Conread position: | 168-460 |
| Cow position: | chr25:6172524-6172233 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 47, 168 |
| Conread position: | 168-460 |
| Cow position: | chr25:13550409-13550700 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 47, 168 |
| Conread position: | 168-502 |
| Cow position: | chr25:18422651-18422323 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 237 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 52, 47 |
| Conread position: | 168-511 |
| Cow position: | chr25:18304027-18303699 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 28, 164 |
| Conread position: | 168-533 |
| Cow position: | chr25:12942072-12942432 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 257 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 47, 189 |
| Conread position: | 171-508 |
| Cow position: | chr25:11932480-11932812 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 245 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 44, 64 |
| Conread position: | 173-489 |
| Cow position: | chr25:24659872-24659562 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 161 |
| Conread position: | 174-417 |
| Cow position: | chr25:40918539-40918780 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 187 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 42, 171 |
| Conread position: | 177-381 |
| Cow position: | chr25:20630250-20630037 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 187-426 |
| Cow position: | chr25:22148145-22147909 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 28, 58 |
| Conread position: | 187-445 |
| Cow position: | chr25:26879797-26879544 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 28, 158 |
| Conread position: | 187-503 |
| Cow position: | chr25:13781639-13781326 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 28, 151 |
| Conread position: | 188-498 |
| Cow position: | chr25:8675523-8675212 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 231 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 27, 148 |
| Conread position: | 188-499 |
| Cow position: | chr25:18254377-18254679 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 209 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 96, 77 |
| Conread position: | 188-504 |
| Cow position: | chr25:16552225-16552533 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 106, 23 |
| Conread position: | 189-505 |
| Cow position: | chr25:34346411-34346721 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 26, 174 |
| Conread position: | 192-516 |
| Cow position: | chr25:3377753-3378062 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 23, 62 |
| Conread position: | 197-426 |
| Cow position: | chr25:11831815-11832056 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 19, 179 |
| Conread position: | 202-418 |
| Cow position: | chr25:26279834-26279625 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 84, 38 |
| Conread position: | 202-517 |
| Cow position: | chr25:18274390-18274703 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 42, 134 |
| Conread position: | 213-500 |
| Cow position: | chr25:34013908-34014189 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 81, 140 |
| Conread position: | 275-522 |
| Cow position: | chr25:23344384-23344629 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 20, 77 |
| Conread position: | 352-509 |
| Cow position: | chr25:20495172-20495016 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 22, 0 |
Show alignments to all cow chromosomes.