Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8027I19.5 |
| Conread position: | 168-432 |
| Cow position: | chr27:27752628-27752880 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 114, 47 |
| Conread position: | 168-445 |
| Cow position: | chr27:15541908-15541632 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 41, 189 |
| Conread position: | 168-458 |
| Cow position: | chr27:16033815-16034101 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 189 |
| Conread position: | 168-500 |
| Cow position: | chr27:15277484-15277816 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 47, 188 |
| Conread position: | 173-551 |
| Cow position: | chr27:6014358-6013991 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 42 |
| Conread position: | 186-441 |
| Cow position: | chr27:28079012-28078757 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 29, 172 |
| Conread position: | 187-419 |
| Cow position: | chr27:26325633-26325402 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 28, 174 |
| Conread position: | 187-445 |
| Cow position: | chr27:9330288-9330031 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 28, 85 |
| Conread position: | 187-501 |
| Cow position: | chr27:893774-893461 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 229 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 29, 170 |
| Conread position: | 187-503 |
| Cow position: | chr27:1209916-1209605 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 168 |
| Conread position: | 187-503 |
| Cow position: | chr27:14459890-14460202 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 28, 170 |
| Conread position: | 187-514 |
| Cow position: | chr27:23335730-23335404 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 28, 170 |
| Conread position: | 187-517 |
| Cow position: | chr27:26555100-26555422 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 232 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 25, 147 |
| Conread position: | 188-503 |
| Cow position: | chr27:9992637-9992949 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 229 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 27, 169 |
| Conread position: | 194-531 |
| Cow position: | chr27:22148628-22148284 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 231 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 21, 101 |
| Conread position: | 202-431 |
| Cow position: | chr27:15037045-15037268 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 84, 154 |
| Conread position: | 202-431 |
| Cow position: | chr27:15046714-15046493 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 84, 154 |
| Conread position: | 202-553 |
| Cow position: | chr27:15637826-15638170 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 245 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 244, 138 |
| Conread position: | 208-439 |
| Cow position: | chr27:27663482-27663257 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 86, 144 |
| Conread position: | 209-525 |
| Cow position: | chr27:1138917-1138613 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 86, 124 |
| Conread position: | 216-445 |
| Cow position: | chr27:5911394-5911171 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 77, 118 |
| Conread position: | 228-417 |
| Cow position: | chr27:22318266-22318083 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 66, 113 |
| Conread position: | 329-434 |
| Cow position: | chr27:20801654-20801548 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 89 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
Show alignments to all cow chromosomes.