Cow genome map
Conread name: | Ss1.1-Pig4-TMW8027I19.5 |
Conread position: | 25-496 |
Cow position: | chr28:14914279-14913821 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 316 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 117, 35 |
Conread position: | 80-173 |
Cow position: | chr28:8347969-8347873 (view UCSC Genome Browser custom track) |
Alignm length: | 97 |
Alignm identity: | 82 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 114-504 |
Cow position: | chr28:10581302-10581687 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 245 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 98, 15 |
Conread position: | 168-432 |
Cow position: | chr28:24589477-24589212 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 195 |
Alignm E-value: | 9e-36 |
Alignm gaps (pig, cow): | 47, 168 |
Conread position: | 168-438 |
Cow position: | chr28:18100596-18100862 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 189 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 47, 76 |
Conread position: | 168-458 |
Cow position: | chr28:1953755-1953467 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 218 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 47, 191 |
Conread position: | 168-458 |
Cow position: | chr28:7822881-7822595 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 189 |
Conread position: | 168-460 |
Cow position: | chr28:2724299-2724590 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 215 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 47, 170 |
Conread position: | 168-460 |
Cow position: | chr28:6538638-6538929 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 209 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 47, 168 |
Conread position: | 168-460 |
Cow position: | chr28:14751169-14750879 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 213 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 47, 189 |
Conread position: | 168-462 |
Cow position: | chr28:22064743-22065041 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 195 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 124, 140 |
Conread position: | 168-492 |
Cow position: | chr28:22232776-22233101 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 216 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 47, 189 |
Conread position: | 168-537 |
Cow position: | chr28:10071904-10071546 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 260 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 123, 11 |
Conread position: | 168-551 |
Cow position: | chr28:26489932-26489553 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 248 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 48, 190 |
Conread position: | 168-552 |
Cow position: | chr28:2988613-2988995 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 257 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 47, 179 |
Conread position: | 168-552 |
Cow position: | chr28:5813639-5813251 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 262 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 46, 178 |
Conread position: | 169-460 |
Cow position: | chr28:6779713-6780001 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 219 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 14, 189 |
Conread position: | 170-505 |
Cow position: | chr28:10872824-10872493 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 224 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 25, 169 |
Conread position: | 171-503 |
Cow position: | chr28:5751082-5751407 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 230 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 44, 111 |
Conread position: | 171-503 |
Cow position: | chr28:17666670-17666999 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 237 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 22, 176 |
Conread position: | 173-503 |
Cow position: | chr28:13460592-13460268 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 230 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 40, 93 |
Conread position: | 173-503 |
Cow position: | chr28:32791755-32792082 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 23 |
Conread position: | 175-553 |
Cow position: | chr28:5801616-5801230 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 100 |
Conread position: | 186-552 |
Cow position: | chr28:10229609-10229978 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 85 |
Conread position: | 187-445 |
Cow position: | chr28:3191645-3191892 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 192 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 28, 147 |
Conread position: | 187-499 |
Cow position: | chr28:2084203-2083894 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 158 |
Conread position: | 187-499 |
Cow position: | chr28:12409617-12409927 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 226 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 28, 170 |
Conread position: | 187-503 |
Cow position: | chr28:1167271-1167583 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 230 |
Alignm E-value: | 7.00649e-44 |
Alignm gaps (pig, cow): | 28, 170 |
Conread position: | 187-503 |
Cow position: | chr28:1505476-1505162 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 170 |
Conread position: | 187-503 |
Cow position: | chr28:1814258-1814569 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 226 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 28, 168 |
Conread position: | 187-503 |
Cow position: | chr28:5113687-5114000 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 229 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 21, 170 |
Conread position: | 187-503 |
Cow position: | chr28:5566760-5566443 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 228 |
Alignm E-value: | 7.00649e-44 |
Alignm gaps (pig, cow): | 28, 156 |
Conread position: | 187-503 |
Cow position: | chr28:5938090-5937774 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 136 |
Conread position: | 187-503 |
Cow position: | chr28:17389093-17388780 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 230 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 28, 157 |
Conread position: | 187-503 |
Cow position: | chr28:26425640-26425953 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 227 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 28, 170 |
Conread position: | 187-503 |
Cow position: | chr28:33252916-33252610 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 226 |
Alignm E-value: | 8e-35 |
Alignm gaps (pig, cow): | 28, 141 |
Conread position: | 187-503 |
Cow position: | chr28:34594589-34594277 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 225 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 28, 170 |
Conread position: | 187-508 |
Cow position: | chr28:783002-782687 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 223 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 28, 168 |
Conread position: | 187-510 |
Cow position: | chr28:18519839-18520158 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 227 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 28, 130 |
Conread position: | 187-552 |
Cow position: | chr28:7789342-7789708 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 256 |
Alignm E-value: | 9e-36 |
Alignm gaps (pig, cow): | 18, 71 |
Conread position: | 187-570 |
Cow position: | chr28:3020143-3020521 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 263 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 13, 23 |
Conread position: | 192-525 |
Cow position: | chr28:10497416-10497740 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 229 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 23, 108 |
Conread position: | 193-503 |
Cow position: | chr28:7741080-7740779 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 219 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 21, 160 |
Conread position: | 199-538 |
Cow position: | chr28:22260556-22260884 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 239 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 11, 154 |
Conread position: | 201-429 |
Cow position: | chr28:14195100-14195323 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 158 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 80, 54 |
Conread position: | 202-503 |
Cow position: | chr28:12150894-12150602 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 205 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 93, 150 |
Conread position: | 202-549 |
Cow position: | chr28:8720707-8721050 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 241 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 79, 129 |
Conread position: | 202-553 |
Cow position: | chr28:10646804-10647143 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 245 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 129, 94 |
Conread position: | 211-433 |
Cow position: | chr28:1386825-1387038 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 159 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 83, 54 |
Conread position: | 211-503 |
Cow position: | chr28:7002571-7002288 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 207 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 83, 140 |
Conread position: | 211-503 |
Cow position: | chr28:29820315-29820032 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 207 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 79, 15 |
Conread position: | 213-460 |
Cow position: | chr28:484989-485230 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 175 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 73, 139 |
Conread position: | 244-432 |
Cow position: | chr28:24588634-24588450 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 140 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 47, 87 |
Conread position: | 301-503 |
Cow position: | chr28:14705181-14705373 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 140 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 375-532 |
Cow position: | chr28:29436440-29436600 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 122 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 120, 0 |
Show alignments to all cow chromosomes.