Cow genome map

Conread name: Ss1.1-Pig4-TMW8027I19.5

Conread position: 25-496
Cow position: chr28:14914279-14913821 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 316
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 117, 35

Conread position: 80-173
Cow position: chr28:8347969-8347873 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 114-504
Cow position: chr28:10581302-10581687 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 245
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 98, 15

Conread position: 168-432
Cow position: chr28:24589477-24589212 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 195
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 47, 168

Conread position: 168-438
Cow position: chr28:18100596-18100862 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 189
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 47, 76

Conread position: 168-458
Cow position: chr28:1953755-1953467 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 218
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 47, 191

Conread position: 168-458
Cow position: chr28:7822881-7822595 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 189

Conread position: 168-460
Cow position: chr28:2724299-2724590 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 215
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 47, 170

Conread position: 168-460
Cow position: chr28:6538638-6538929 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 209
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 47, 168

Conread position: 168-460
Cow position: chr28:14751169-14750879 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 213
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 47, 189

Conread position: 168-462
Cow position: chr28:22064743-22065041 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 195
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 124, 140

Conread position: 168-492
Cow position: chr28:22232776-22233101 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 216
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 47, 189

Conread position: 168-537
Cow position: chr28:10071904-10071546 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 260
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 123, 11

Conread position: 168-551
Cow position: chr28:26489932-26489553 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 248
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 48, 190

Conread position: 168-552
Cow position: chr28:2988613-2988995 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 257
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 47, 179

Conread position: 168-552
Cow position: chr28:5813639-5813251 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 262
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 46, 178

Conread position: 169-460
Cow position: chr28:6779713-6780001 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 219
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 14, 189

Conread position: 170-505
Cow position: chr28:10872824-10872493 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 224
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 25, 169

Conread position: 171-503
Cow position: chr28:5751082-5751407 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 230
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 44, 111

Conread position: 171-503
Cow position: chr28:17666670-17666999 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 237
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 22, 176

Conread position: 173-503
Cow position: chr28:13460592-13460268 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 230
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 40, 93

Conread position: 173-503
Cow position: chr28:32791755-32792082 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 23

Conread position: 175-553
Cow position: chr28:5801616-5801230 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 100

Conread position: 186-552
Cow position: chr28:10229609-10229978 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 85

Conread position: 187-445
Cow position: chr28:3191645-3191892 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 192
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 28, 147

Conread position: 187-499
Cow position: chr28:2084203-2083894 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 158

Conread position: 187-499
Cow position: chr28:12409617-12409927 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 226
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 28, 170

Conread position: 187-503
Cow position: chr28:1167271-1167583 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 230
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 28, 170

Conread position: 187-503
Cow position: chr28:1505476-1505162 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 170

Conread position: 187-503
Cow position: chr28:1814258-1814569 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 226
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 28, 168

Conread position: 187-503
Cow position: chr28:5113687-5114000 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 229
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 21, 170

Conread position: 187-503
Cow position: chr28:5566760-5566443 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 228
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 28, 156

Conread position: 187-503
Cow position: chr28:5938090-5937774 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 136

Conread position: 187-503
Cow position: chr28:17389093-17388780 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 230
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 28, 157

Conread position: 187-503
Cow position: chr28:26425640-26425953 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 227
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 28, 170

Conread position: 187-503
Cow position: chr28:33252916-33252610 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 226
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 28, 141

Conread position: 187-503
Cow position: chr28:34594589-34594277 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 225
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 28, 170

Conread position: 187-508
Cow position: chr28:783002-782687 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 223
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 28, 168

Conread position: 187-510
Cow position: chr28:18519839-18520158 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 227
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 28, 130

Conread position: 187-552
Cow position: chr28:7789342-7789708 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 256
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 18, 71

Conread position: 187-570
Cow position: chr28:3020143-3020521 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 263
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 13, 23

Conread position: 192-525
Cow position: chr28:10497416-10497740 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 229
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 23, 108

Conread position: 193-503
Cow position: chr28:7741080-7740779 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 219
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 21, 160

Conread position: 199-538
Cow position: chr28:22260556-22260884 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 239
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 11, 154

Conread position: 201-429
Cow position: chr28:14195100-14195323 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 158
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 80, 54

Conread position: 202-503
Cow position: chr28:12150894-12150602 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 205
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 93, 150

Conread position: 202-549
Cow position: chr28:8720707-8721050 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 241
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 79, 129

Conread position: 202-553
Cow position: chr28:10646804-10647143 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 245
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 129, 94

Conread position: 211-433
Cow position: chr28:1386825-1387038 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 83, 54

Conread position: 211-503
Cow position: chr28:7002571-7002288 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 207
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 83, 140

Conread position: 211-503
Cow position: chr28:29820315-29820032 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 207
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 79, 15

Conread position: 213-460
Cow position: chr28:484989-485230 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 73, 139

Conread position: 244-432
Cow position: chr28:24588634-24588450 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 47, 87

Conread position: 301-503
Cow position: chr28:14705181-14705373 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 140
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 375-532
Cow position: chr28:29436440-29436600 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 120, 0

Show alignments to all cow chromosomes.