Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8027I19.5
        

               Conread position:
               165-538
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 51
               

               Conread position:
               168-327
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               168-346
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               168-427
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-427
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               195
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-430
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               44, 192
               

               Conread position:
               168-432
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 179
               

               Conread position:
               168-458
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               216
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               47, 168
               

               Conread position:
               168-458
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               220
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               36, 189
               

               Conread position:
               168-458
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               76, 189
               

               Conread position:
               168-458
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               209
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-458
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               216
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               47, 171
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               47, 152
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               211
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               45, 168
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               47, 168
               

               Conread position:
               168-469
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               48, 32
               

               Conread position:
               168-487
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               47, 168
               

               Conread position:
               168-497
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               47, 171
               

               Conread position:
               168-507
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               242
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-525
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               47, 83
               

               Conread position:
               168-548
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 88
               

               Conread position:
               168-549
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 155
               

               Conread position:
               168-550
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 20
               

               Conread position:
               168-551
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               264
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               47, 128
               

               Conread position:
               168-552
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 47
               

               Conread position:
               171-327
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               171-485
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 186
               

               Conread position:
               171-497
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               233
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               44, 186
               

               Conread position:
               171-553
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               21, 47
               

               Conread position:
               173-431
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               42, 197
               

               Conread position:
               173-433
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               42, 184
               

               Conread position:
               173-503
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               35, 69
               

               Conread position:
               173-516
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               247
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               37, 175
               

               Conread position:
               173-536
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               176-506
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               39, 181
               

               Conread position:
               176-552
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               260
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               12, 183
               

               Conread position:
               177-525
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               247
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               36, 168
               

               Conread position:
               177-550
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               260
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               51, 38
               

               Conread position:
               187-415
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               28, 174
               

               Conread position:
               187-445
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               37, 28
               

               Conread position:
               187-489
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               217
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               28, 51
               

               Conread position:
               187-499
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               232
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               27, 158
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               27, 168
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               229
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               28, 170
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               25, 170
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               29, 174
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               22, 172
               

               Conread position:
               187-505
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               233
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               28, 200
               

               Conread position:
               188-506
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               219
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               28, 152
               

               Conread position:
               190-522
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               230
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               24, 144
               

               Conread position:
               192-468
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               23, 128
               

               Conread position:
               193-503
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               225
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               22, 123
               

               Conread position:
               194-521
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               22, 69
               

               Conread position:
               198-503
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               217
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               96, 154
               

               Conread position:
               199-517
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               11, 133
               

               Conread position:
               202-503
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               91, 132
               

               Conread position:
               215-418
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               73, 121
               

               Conread position:
               216-551
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               115, 56
               

               Conread position:
               228-445
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               67, 46
               

               Conread position:
               229-503
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               65, 123
               

               Conread position:
               240-502
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               55, 112
               

               Conread position:
               244-500
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               51, 108
               

               Conread position:
               250-553
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               278, 78
               

               Conread position:
               265-460
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               23, 68
               

               Conread position:
               346-499
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               397-523
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               100, 38
               
Show alignments to all cow chromosomes.