Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8027I19.5
        

               Conread position:
               162-424
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               46, 170
               

               Conread position:
               163-496
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               242
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               52, 194
               

               Conread position:
               163-503
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               15, 7
               

               Conread position:
               165-509
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               239
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               47, 167
               

               Conread position:
               168-309
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               45, 108
               

               Conread position:
               168-327
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               48, 102
               

               Conread position:
               168-347
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               47, 105
               

               Conread position:
               168-364
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               47, 168
               

               Conread position:
               168-410
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-425
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               47, 168
               

               Conread position:
               168-432
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-442
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               102, 29
               

               Conread position:
               168-445
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               203
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-445
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               47, 168
               

               Conread position:
               168-445
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               206
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-445
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               207
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               47, 32
               

               Conread position:
               168-445
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               196
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               55, 188
               

               Conread position:
               168-458
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               47, 191
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               45, 168
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               47, 168
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               213
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               217
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 191
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 218
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               47, 188
               

               Conread position:
               168-478
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               231
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               42, 169
               

               Conread position:
               168-496
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               240
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               47, 143
               

               Conread position:
               168-529
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               60, 22
               

               Conread position:
               169-460
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               13, 48
               

               Conread position:
               170-415
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               117, 40
               

               Conread position:
               171-432
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               44, 165
               

               Conread position:
               171-458
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               44, 185
               

               Conread position:
               171-500
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               225
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               25, 181
               

               Conread position:
               171-526
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               44, 127
               

               Conread position:
               171-547
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 178
               

               Conread position:
               172-315
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               172-520
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               246
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               43, 215
               

               Conread position:
               173-362
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               173-458
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               10, 94
               

               Conread position:
               173-511
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               239
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               40, 163
               

               Conread position:
               173-517
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               37, 17
               

               Conread position:
               185-484
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               213
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               43, 37
               

               Conread position:
               187-377
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               187-425
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               107, 28
               

               Conread position:
               187-441
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               28, 158
               

               Conread position:
               187-444
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               28, 169
               

               Conread position:
               187-499
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               26, 174
               

               Conread position:
               187-502
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               28, 146
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               229
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               29, 169
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               233
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               27, 83
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               28, 149
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               226
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               24, 170
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               227
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               28, 149
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               28, 170
               

               Conread position:
               187-552
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               29, 207
               

               Conread position:
               187-579
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               262
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               28, 147
               

               Conread position:
               188-499
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               224
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               27, 57
               

               Conread position:
               192-433
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               23, 53
               

               Conread position:
               193-553
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               255
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               22, 167
               

               Conread position:
               195-460
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               196
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               91, 20
               

               Conread position:
               198-445
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               102, 76
               

               Conread position:
               202-502
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               80, 140
               

               Conread position:
               202-503
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               205-445
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               82, 9
               

               Conread position:
               210-551
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               95, 14
               

               Conread position:
               212-500
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               83, 34
               

               Conread position:
               213-440
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               81, 103
               

               Conread position:
               226-342
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               240-426
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               54, 100
               

               Conread position:
               240-503
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               55, 112
               

               Conread position:
               241-431
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               5, 94
               

               Conread position:
               244-505
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               41, 107
               

               Conread position:
               245-460
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               41, 107
               

               Conread position:
               252-552
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               41, 82
               

               Conread position:
               259-433
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               32, 110
               

               Conread position:
               365-512
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               9, 0
               
Show alignments to all cow chromosomes.