Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8027I19.5
        

               Conread position:
               47-500
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               291
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               94, 23
               

               Conread position:
               163-433
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               18, 185
               

               Conread position:
               163-442
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               52, 25
               

               Conread position:
               163-445
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               18, 198
               

               Conread position:
               168-326
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               118, 134
               

               Conread position:
               168-344
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               168-421
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               47, 159
               

               Conread position:
               168-422
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               45, 189
               

               Conread position:
               168-432
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               47, 168
               

               Conread position:
               168-432
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               41, 190
               

               Conread position:
               168-432
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               47, 98
               

               Conread position:
               168-432
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               47, 74
               

               Conread position:
               168-432
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               47, 193
               

               Conread position:
               168-433
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               197
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               46, 167
               

               Conread position:
               168-433
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               37, 149
               

               Conread position:
               168-441
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               47, 213
               

               Conread position:
               168-441
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               40, 167
               

               Conread position:
               168-445
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               47, 168
               

               Conread position:
               168-458
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               39, 190
               

               Conread position:
               168-458
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-458
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               47, 168
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               209
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               210
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               47, 168
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               215
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               47, 168
               

               Conread position:
               168-478
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               226
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-485
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               229
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               47, 168
               

               Conread position:
               168-488
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               47, 131
               

               Conread position:
               168-496
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               238
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               48, 172
               

               Conread position:
               168-501
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               34, 317
               

               Conread position:
               168-503
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               233
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               45, 189
               

               Conread position:
               168-526
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               259
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               47, 102
               

               Conread position:
               168-548
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               124, 40
               

               Conread position:
               168-550
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 67
               

               Conread position:
               168-551
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               266
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               48, 168
               

               Conread position:
               168-552
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 219
               

               Conread position:
               171-426
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               44, 80
               

               Conread position:
               171-445
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               44, 174
               

               Conread position:
               171-445
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               44, 166
               

               Conread position:
               171-458
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               41, 21
               

               Conread position:
               171-498
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               232
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               40, 187
               

               Conread position:
               171-503
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               239
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               22, 73
               

               Conread position:
               171-505
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               45, 163
               

               Conread position:
               171-506
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               230
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               15, 157
               

               Conread position:
               173-433
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               39, 100
               

               Conread position:
               173-458
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               214
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               42, 10
               

               Conread position:
               173-458
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               210
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               42, 166
               

               Conread position:
               173-494
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               231
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               36, 184
               

               Conread position:
               173-500
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               37, 62
               

               Conread position:
               173-503
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               232
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               42, 184
               

               Conread position:
               174-445
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               117, 41
               

               Conread position:
               176-550
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               269
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               35, 122
               

               Conread position:
               177-460
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 137
               

               Conread position:
               177-549
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 40
               

               Conread position:
               178-345
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               36, 98
               

               Conread position:
               180-501
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               214
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               155, 35
               

               Conread position:
               187-346
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               28, 149
               

               Conread position:
               187-409
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               28, 169
               

               Conread position:
               187-416
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               29, 128
               

               Conread position:
               187-439
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               56, 28
               

               Conread position:
               187-461
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               27, 86
               

               Conread position:
               187-474
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               206
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               107, 155
               

               Conread position:
               187-499
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               28, 170
               

               Conread position:
               187-501
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               21, 174
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               231
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               28, 170
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               224
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               28, 100
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               29, 152
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               28, 174
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               29, 170
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               219
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               108, 167
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               232
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               28, 158
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               26, 158
               

               Conread position:
               187-508
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               225
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               28, 170
               

               Conread position:
               188-439
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               27, 85
               

               Conread position:
               188-503
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               27, 169
               

               Conread position:
               189-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               230
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               26, 174
               

               Conread position:
               192-503
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               24, 164
               

               Conread position:
               192-552
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               23, 166
               

               Conread position:
               193-445
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               22, 168
               

               Conread position:
               193-500
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               205
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               19, 103
               

               Conread position:
               199-507
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               11, 142
               

               Conread position:
               199-513
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               227
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               17, 158
               

               Conread position:
               200-552
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               239
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               85, 42
               

               Conread position:
               202-497
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               83, 101
               

               Conread position:
               202-503
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               92, 129
               

               Conread position:
               202-508
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               93, 63
               

               Conread position:
               202-533
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               67, 24
               

               Conread position:
               213-526
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               81, 139
               

               Conread position:
               240-496
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               190
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               55, 25
               

               Conread position:
               240-550
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               58, 99
               

               Conread position:
               265-527
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               46, 87
               

               Conread position:
               359-553
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               143, 16
               
Show alignments to all cow chromosomes.