Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8027I19.5
        

               Conread position:
               95-460
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               21, 32
               

               Conread position:
               163-488
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               15, 7
               

               Conread position:
               163-503
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               18, 158
               

               Conread position:
               167-460
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               215
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               48, 33
               

               Conread position:
               168-313
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               168-416
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               47, 215
               

               Conread position:
               168-418
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               47, 168
               

               Conread position:
               168-423
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               47, 74
               

               Conread position:
               168-425
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               118, 54
               

               Conread position:
               168-430
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               44, 63
               

               Conread position:
               168-432
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               41, 190
               

               Conread position:
               168-441
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               44, 88
               

               Conread position:
               168-445
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               47, 97
               

               Conread position:
               168-445
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               45, 188
               

               Conread position:
               168-458
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               118, 47
               

               Conread position:
               168-458
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               211
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               215
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               47, 138
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               216
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               45, 168
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               47, 34
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               215
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               213
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-468
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               65, 54
               

               Conread position:
               168-468
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               216
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               47, 168
               

               Conread position:
               168-514
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               238
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               47, 155
               

               Conread position:
               168-525
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 159
               

               Conread position:
               168-527
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               252
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               33, 95
               

               Conread position:
               168-528
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 171
               

               Conread position:
               168-530
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               253
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               44, 102
               

               Conread position:
               168-546
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               64, 54
               

               Conread position:
               169-460
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               14, 178
               

               Conread position:
               169-553
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 150
               

               Conread position:
               171-361
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               171-363
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               171-441
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               28, 88
               

               Conread position:
               171-500
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               45, 192
               

               Conread position:
               171-530
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               242
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               32, 78
               

               Conread position:
               171-538
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 99
               

               Conread position:
               171-569
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               272
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               43, 89
               

               Conread position:
               172-440
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               40, 28
               

               Conread position:
               172-553
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               42, 175
               

               Conread position:
               173-394
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               112, 42
               

               Conread position:
               173-434
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               43, 162
               

               Conread position:
               173-445
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               42, 82
               

               Conread position:
               173-460
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               11, 29
               

               Conread position:
               173-526
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               43, 71
               

               Conread position:
               173-553
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 172
               

               Conread position:
               174-552
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 167
               

               Conread position:
               178-512
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               34, 74
               

               Conread position:
               179-527
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               245
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               11, 179
               

               Conread position:
               185-458
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               30, 172
               

               Conread position:
               187-365
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               28, 56
               

               Conread position:
               187-442
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               28, 148
               

               Conread position:
               187-489
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               220
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               28, 170
               

               Conread position:
               187-500
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               224
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               28, 83
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               230
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               57, 28
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               227
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               28, 42
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               107, 124
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               227
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               28, 170
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               230
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               28, 170
               

               Conread position:
               187-504
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               219
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               28, 170
               

               Conread position:
               187-509
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               28, 83
               

               Conread position:
               187-528
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               27, 82
               

               Conread position:
               188-445
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               98, 26
               

               Conread position:
               188-516
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               233
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               27, 172
               

               Conread position:
               189-404
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               28, 124
               

               Conread position:
               189-503
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               230
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               26, 147
               

               Conread position:
               193-351
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               93, 68
               

               Conread position:
               193-501
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               24, 161
               

               Conread position:
               193-505
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               225
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               22, 36
               

               Conread position:
               194-490
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               257, 21
               

               Conread position:
               199-503
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               213
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               11, 136
               

               Conread position:
               202-500
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               217
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               39, 35
               

               Conread position:
               202-518
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               209
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               264, 58
               

               Conread position:
               202-537
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               71, 55
               

               Conread position:
               211-499
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               200
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               75, 51
               

               Conread position:
               211-500
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               80, 141
               

               Conread position:
               211-514
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               84, 145
               

               Conread position:
               213-534
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               227
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               77, 129
               

               Conread position:
               216-503
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               78, 126
               

               Conread position:
               222-503
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               73, 112
               

               Conread position:
               244-503
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               51, 93
               

               Conread position:
               261-503
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               34, 97
               
Show alignments to all cow chromosomes.