Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8027I19.5
        

               Conread position:
               85-537
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               298
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               40, 11
               

               Conread position:
               161-430
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               54, 154
               

               Conread position:
               163-460
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               52, 194
               

               Conread position:
               163-464
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               7, 198
               

               Conread position:
               168-318
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               168-413
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               46, 154
               

               Conread position:
               168-432
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               47, 190
               

               Conread position:
               168-432
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-445
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               47, 155
               

               Conread position:
               168-445
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               47, 180
               

               Conread position:
               168-458
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-458
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 168
               

               Conread position:
               168-458
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               217
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               47, 168
               

               Conread position:
               168-458
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-459
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               211
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               41, 189
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               214
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               47, 168
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               213
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               216
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               47, 168
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               118, 173
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               215
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-467
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               41, 188
               

               Conread position:
               168-482
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               47, 168
               

               Conread position:
               168-489
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               45, 167
               

               Conread position:
               168-496
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               231
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               47, 178
               

               Conread position:
               168-511
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               165, 58
               

               Conread position:
               168-512
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               13, 47
               

               Conread position:
               168-526
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               250
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               16, 50
               

               Conread position:
               168-528
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 192
               

               Conread position:
               168-536
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               254
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               39, 162
               

               Conread position:
               168-553
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               265
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               124, 20
               

               Conread position:
               169-460
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               46, 170
               

               Conread position:
               169-503
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               240
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               9, 190
               

               Conread position:
               171-445
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 30
               

               Conread position:
               171-445
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               201
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               45, 164
               

               Conread position:
               171-478
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               227
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               44, 186
               

               Conread position:
               171-498
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               44, 83
               

               Conread position:
               173-420
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               111, 169
               

               Conread position:
               173-503
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               42, 163
               

               Conread position:
               173-553
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               270
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               121, 42
               

               Conread position:
               176-503
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               233
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               39, 160
               

               Conread position:
               177-508
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               7, 162
               

               Conread position:
               177-552
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 9
               

               Conread position:
               179-498
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               234
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               36, 143
               

               Conread position:
               182-438
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               196
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               20, 88
               

               Conread position:
               182-500
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               33, 115
               

               Conread position:
               182-503
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               33, 182
               

               Conread position:
               187-346
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               28, 83
               

               Conread position:
               187-358
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               27, 9
               

               Conread position:
               187-409
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               28, 170
               

               Conread position:
               187-445
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               28, 170
               

               Conread position:
               187-459
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               22, 169
               

               Conread position:
               187-474
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               29, 142
               

               Conread position:
               187-474
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               213
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               30, 168
               

               Conread position:
               187-488
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               221
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               21, 170
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               28, 170
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               28, 189
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               28, 170
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               28, 170
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               231
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               29, 149
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               227
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               28, 170
               

               Conread position:
               187-505
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               235
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               28, 156
               

               Conread position:
               187-505
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               227
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               26, 170
               

               Conread position:
               187-512
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 149
               

               Conread position:
               187-512
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               27, 83
               

               Conread position:
               187-529
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               240
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               29, 169
               

               Conread position:
               187-553
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               252
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               14, 148
               

               Conread position:
               188-439
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               27, 158
               

               Conread position:
               188-439
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               26, 169
               

               Conread position:
               188-503
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 165
               

               Conread position:
               188-525
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               29, 94
               

               Conread position:
               189-491
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               26, 157
               

               Conread position:
               192-430
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               23, 141
               

               Conread position:
               192-434
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               20, 164
               

               Conread position:
               192-536
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               244
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               23, 143
               

               Conread position:
               193-553
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               61, 92
               

               Conread position:
               199-503
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               86, 135
               

               Conread position:
               200-534
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               94, 30
               

               Conread position:
               202-489
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               93, 150
               

               Conread position:
               202-499
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               86, 136
               

               Conread position:
               202-499
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               93, 24
               

               Conread position:
               202-499
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               270, 153
               

               Conread position:
               202-503
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               202-503
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               204-499
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               15, 127
               

               Conread position:
               211-474
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               88, 58
               

               Conread position:
               211-489
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               201
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               84, 141
               

               Conread position:
               212-460
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               74, 119
               

               Conread position:
               222-431
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               62, 154
               

               Conread position:
               228-440
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               66, 40
               

               Conread position:
               228-485
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               58, 46
               

               Conread position:
               228-503
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               59, 124
               

               Conread position:
               239-533
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               49, 103
               

               Conread position:
               240-525
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               201
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               44, 103
               

               Conread position:
               349-514
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               127, 25
               
Show alignments to all cow chromosomes.