Cow genome map

Conread name: Ss1.1-Pig4-TMW8027I19.5

Conread position: 85-537
Cow position: chr8:12542543-12542991 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 298
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 40, 11

Conread position: 161-430
Cow position: chr8:12068522-12068261 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 184
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 54, 154

Conread position: 163-460
Cow position: chr8:34348508-34348212 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 212
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 52, 194

Conread position: 163-464
Cow position: chr8:27579231-27578935 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 217
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 7, 198

Conread position: 168-318
Cow position: chr8:25376586-25376429 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 168-413
Cow position: chr8:16087177-16086934 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 196
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 46, 154

Conread position: 168-432
Cow position: chr8:22571484-22571748 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 196
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 47, 190

Conread position: 168-432
Cow position: chr8:32631202-32631465 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 196
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 47, 189

Conread position: 168-445
Cow position: chr8:9276008-9275731 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 201
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 47, 155

Conread position: 168-445
Cow position: chr8:10749196-10748913 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 206
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 47, 180

Conread position: 168-458
Cow position: chr8:8517758-8518044 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 210
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 47, 189

Conread position: 168-458
Cow position: chr8:9736072-9735786 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 168

Conread position: 168-458
Cow position: chr8:30891491-30891776 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 217
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 47, 168

Conread position: 168-458
Cow position: chr8:32437259-32437541 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 213
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 47, 189

Conread position: 168-459
Cow position: chr8:1153484-1153773 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 211
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 41, 189

Conread position: 168-460
Cow position: chr8:6684272-6683981 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 214
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 47, 168

Conread position: 168-460
Cow position: chr8:8556322-8556614 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 213
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 47, 189

Conread position: 168-460
Cow position: chr8:15711591-15711882 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 216
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 47, 168

Conread position: 168-460
Cow position: chr8:21158013-21158293 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 202
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 118, 173

Conread position: 168-460
Cow position: chr8:37931916-37931625 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 215
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 47, 189

Conread position: 168-467
Cow position: chr8:2886575-2886278 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 213
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 41, 188

Conread position: 168-482
Cow position: chr8:6064943-6065250 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 225
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 47, 168

Conread position: 168-489
Cow position: chr8:47885853-47885534 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 218
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 45, 167

Conread position: 168-496
Cow position: chr8:2170545-2170875 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 231
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 47, 178

Conread position: 168-511
Cow position: chr8:42658026-42658368 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 237
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 165, 58

Conread position: 168-512
Cow position: chr8:48786993-48786675 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 235
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 13, 47

Conread position: 168-526
Cow position: chr8:46179978-46179599 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 250
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 16, 50

Conread position: 168-528
Cow position: chr8:24874286-24874650 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 192

Conread position: 168-536
Cow position: chr8:38606370-38606735 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 254
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 39, 162

Conread position: 168-553
Cow position: chr8:38577572-38577936 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 265
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 124, 20

Conread position: 169-460
Cow position: chr8:1319868-1319579 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 211
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 46, 170

Conread position: 169-503
Cow position: chr8:23771467-23771135 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 240
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 9, 190

Conread position: 171-445
Cow position: chr8:46944085-46944363 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 30

Conread position: 171-445
Cow position: chr8:58186389-58186659 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 201
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 45, 164

Conread position: 171-478
Cow position: chr8:47068984-47069283 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 227
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 44, 186

Conread position: 171-498
Cow position: chr8:47075090-47074768 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 216
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 44, 83

Conread position: 173-420
Cow position: chr8:44662860-44663102 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 171
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 111, 169

Conread position: 173-503
Cow position: chr8:60061203-60060880 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 230
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 42, 163

Conread position: 173-553
Cow position: chr8:38585506-38585860 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 270
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 121, 42

Conread position: 176-503
Cow position: chr8:39195391-39195717 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 233
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 39, 160

Conread position: 177-508
Cow position: chr8:8911329-8911000 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 237
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 7, 162

Conread position: 177-552
Cow position: chr8:19189052-19188677 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 9

Conread position: 179-498
Cow position: chr8:1348416-1348735 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 234
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 36, 143

Conread position: 182-438
Cow position: chr8:25420356-25420615 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 196
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 20, 88

Conread position: 182-500
Cow position: chr8:11822126-11821815 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 224
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 33, 115

Conread position: 182-503
Cow position: chr8:3856190-3856516 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 224
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 33, 182

Conread position: 187-346
Cow position: chr8:46050994-46050829 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 28, 83

Conread position: 187-358
Cow position: chr8:58296699-58296877 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 145
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 27, 9

Conread position: 187-409
Cow position: chr8:41645917-41646134 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 170

Conread position: 187-445
Cow position: chr8:24915529-24915786 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 189
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 28, 170

Conread position: 187-459
Cow position: chr8:50930319-50930590 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 201
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 22, 169

Conread position: 187-474
Cow position: chr8:11802633-11802347 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 199
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 142

Conread position: 187-474
Cow position: chr8:47661513-47661797 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 213
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 30, 168

Conread position: 187-488
Cow position: chr8:25408537-25408238 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 221
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 21, 170

Conread position: 187-503
Cow position: chr8:17311832-17311518 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 226
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 28, 170

Conread position: 187-503
Cow position: chr8:19330548-19330236 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 226
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 28, 189

Conread position: 187-503
Cow position: chr8:32318744-32319049 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 223
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 28, 170

Conread position: 187-503
Cow position: chr8:36635732-36636044 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 224
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 28, 170

Conread position: 187-503
Cow position: chr8:38391178-38390868 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 231
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 29, 149

Conread position: 187-503
Cow position: chr8:44243761-44244073 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 227
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 28, 170

Conread position: 187-505
Cow position: chr8:4687209-4686893 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 235
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 28, 156

Conread position: 187-505
Cow position: chr8:42484725-42484412 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 227
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 26, 170

Conread position: 187-512
Cow position: chr8:7161704-7161383 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 149

Conread position: 187-512
Cow position: chr8:42419624-42419948 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 231
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 27, 83

Conread position: 187-529
Cow position: chr8:14591092-14591433 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 240
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 29, 169

Conread position: 187-553
Cow position: chr8:24419395-24419759 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 252
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 14, 148

Conread position: 188-439
Cow position: chr8:8315643-8315892 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 193
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 27, 158

Conread position: 188-439
Cow position: chr8:14928073-14928323 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 188
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 26, 169

Conread position: 188-503
Cow position: chr8:5016989-5016681 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 165

Conread position: 188-525
Cow position: chr8:45216604-45216260 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 226
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 29, 94

Conread position: 189-491
Cow position: chr8:30487575-30487868 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 218
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 26, 157

Conread position: 192-430
Cow position: chr8:8401308-8401545 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 23, 141

Conread position: 192-434
Cow position: chr8:50288120-50288360 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 180
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 20, 164

Conread position: 192-536
Cow position: chr8:45160267-45160613 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 244
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 23, 143

Conread position: 193-553
Cow position: chr8:42160620-42160976 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 244
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 61, 92

Conread position: 199-503
Cow position: chr8:19051272-19050976 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 213
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 86, 135

Conread position: 200-534
Cow position: chr8:45168775-45169101 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 220
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 94, 30

Conread position: 202-489
Cow position: chr8:49215227-49214940 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 204
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 93, 150

Conread position: 202-499
Cow position: chr8:11832496-11832200 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 209
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 86, 136

Conread position: 202-499
Cow position: chr8:12449739-12449448 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 210
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 93, 24

Conread position: 202-499
Cow position: chr8:42164022-42164309 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 200
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 270, 153

Conread position: 202-503
Cow position: chr8:25523194-25522899 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 202-503
Cow position: chr8:25775880-25776173 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 208
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 126, 0

Conread position: 204-499
Cow position: chr8:51667503-51667795 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 208
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 15, 127

Conread position: 211-474
Cow position: chr8:50994565-50994313 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 176
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 88, 58

Conread position: 211-489
Cow position: chr8:33589158-33588887 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 201
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 84, 141

Conread position: 212-460
Cow position: chr8:45797539-45797781 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 181
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 74, 119

Conread position: 222-431
Cow position: chr8:16760394-16760604 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 62, 154

Conread position: 228-440
Cow position: chr8:34108612-34108403 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 66, 40

Conread position: 228-485
Cow position: chr8:8229015-8229267 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 182
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 58, 46

Conread position: 228-503
Cow position: chr8:10742864-10743130 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 194
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 59, 124

Conread position: 239-533
Cow position: chr8:61034263-61034555 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 208
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 49, 103

Conread position: 240-525
Cow position: chr8:47361312-47361595 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 201
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 44, 103

Conread position: 349-514
Cow position: chr8:12717618-12717451 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 127, 25

Show alignments to all cow chromosomes.