Cow genome map
Conread name: | Ss1.1-Pig4-TMW8027I19.5 |
Conread position: | 168-326 |
Cow position: | chr9:4943335-4943500 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 122 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 168-332 |
Cow position: | chr9:3998489-3998318 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 123 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 168-416 |
Cow position: | chr9:34722382-34722146 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 177 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 101, 31 |
Conread position: | 168-432 |
Cow position: | chr9:50791189-50790928 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 195 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 39, 187 |
Conread position: | 168-432 |
Cow position: | chr9:64017984-64018247 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 196 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 45, 189 |
Conread position: | 168-440 |
Cow position: | chr9:31808048-31807782 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 197 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 47, 167 |
Conread position: | 168-445 |
Cow position: | chr9:17063910-17064186 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 208 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 47, 168 |
Conread position: | 168-445 |
Cow position: | chr9:28440285-28440010 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 205 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 47, 111 |
Conread position: | 168-445 |
Cow position: | chr9:51211159-51210883 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 206 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 47, 189 |
Conread position: | 168-455 |
Cow position: | chr9:53702251-53702530 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 201 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 281, 47 |
Conread position: | 168-458 |
Cow position: | chr9:780327-780613 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 211 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 36, 171 |
Conread position: | 168-458 |
Cow position: | chr9:2487641-2487939 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 201 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 39, 219 |
Conread position: | 168-458 |
Cow position: | chr9:21380828-21381107 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 192 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 117, 54 |
Conread position: | 168-458 |
Cow position: | chr9:25035368-25035654 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 211 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 47, 189 |
Conread position: | 168-458 |
Cow position: | chr9:28678450-28678164 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 215 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 47, 189 |
Conread position: | 168-458 |
Cow position: | chr9:30827157-30826873 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 214 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 47, 148 |
Conread position: | 168-460 |
Cow position: | chr9:1075720-1076011 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 207 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 47, 189 |
Conread position: | 168-460 |
Cow position: | chr9:31064910-31064619 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 213 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 48, 189 |
Conread position: | 168-462 |
Cow position: | chr9:45873823-45873534 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 218 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 47, 189 |
Conread position: | 168-466 |
Cow position: | chr9:27934565-27934270 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 218 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 47, 62 |
Conread position: | 168-503 |
Cow position: | chr9:3566358-3566700 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 234 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 48, 215 |
Conread position: | 168-512 |
Cow position: | chr9:4282255-4281915 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 242 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 33, 178 |
Conread position: | 168-525 |
Cow position: | chr9:13476403-13476759 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 248 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 42, 179 |
Conread position: | 168-551 |
Cow position: | chr9:59511866-59511484 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 187 |
Conread position: | 168-552 |
Cow position: | chr9:42556405-42556022 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 189 |
Conread position: | 168-552 |
Cow position: | chr9:44818657-44818283 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 266 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 51, 47 |
Conread position: | 169-432 |
Cow position: | chr9:1251519-1251780 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 192 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 17, 102 |
Conread position: | 169-487 |
Cow position: | chr9:36724980-36724661 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 226 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 14, 190 |
Conread position: | 169-512 |
Cow position: | chr9:59426249-59425914 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 171 |
Conread position: | 170-418 |
Cow position: | chr9:10322281-10322034 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 178 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 43, 172 |
Conread position: | 171-488 |
Cow position: | chr9:59444323-59444006 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 218 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 40, 125 |
Conread position: | 171-523 |
Cow position: | chr9:30488048-30487680 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 247 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 49, 44 |
Conread position: | 171-527 |
Cow position: | chr9:3803817-3803464 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 242 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 44, 25 |
Conread position: | 171-529 |
Cow position: | chr9:1980465-1980112 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 248 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 44, 164 |
Conread position: | 171-531 |
Cow position: | chr9:52291900-52291531 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 244 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 36, 189 |
Conread position: | 171-553 |
Cow position: | chr9:1636425-1636052 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 254 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 41, 99 |
Conread position: | 172-460 |
Cow position: | chr9:49177354-49177641 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 213 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 43, 166 |
Conread position: | 172-509 |
Cow position: | chr9:20308676-20309007 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 233 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 44, 116 |
Conread position: | 172-509 |
Cow position: | chr9:37095998-37095675 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 231 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 43, 10 |
Conread position: | 173-503 |
Cow position: | chr9:28022277-28021950 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 231 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 40, 166 |
Conread position: | 173-525 |
Cow position: | chr9:28688582-28688226 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 253 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 43, 9 |
Conread position: | 173-552 |
Cow position: | chr9:29329133-29328764 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 176 |
Conread position: | 175-489 |
Cow position: | chr9:59173674-59173995 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 209 |
Conread position: | 177-550 |
Cow position: | chr9:3393141-3393516 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 54 |
Conread position: | 181-518 |
Cow position: | chr9:12062031-12061685 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 232 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 42, 164 |
Conread position: | 182-503 |
Cow position: | chr9:60277552-60277870 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 230 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 14, 176 |
Conread position: | 182-536 |
Cow position: | chr9:3543308-3542953 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 244 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 33, 175 |
Conread position: | 187-346 |
Cow position: | chr9:25187564-25187396 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 127 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 28, 83 |
Conread position: | 187-441 |
Cow position: | chr9:59454807-59455055 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 187 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 48, 28 |
Conread position: | 187-445 |
Cow position: | chr9:6830045-6830302 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 191 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 22, 152 |
Conread position: | 187-460 |
Cow position: | chr9:222070-222340 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 193 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 26, 170 |
Conread position: | 187-470 |
Cow position: | chr9:130730-131012 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 205 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 28, 170 |
Conread position: | 187-470 |
Cow position: | chr9:3005786-3006067 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 202 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 29, 64 |
Conread position: | 187-485 |
Cow position: | chr9:27035141-27034849 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 219 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 28, 167 |
Conread position: | 187-496 |
Cow position: | chr9:9013560-9013256 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 147 |
Conread position: | 187-499 |
Cow position: | chr9:42310146-42309835 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 226 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 28, 171 |
Conread position: | 187-502 |
Cow position: | chr9:51181726-51182042 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 229 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 28, 133 |
Conread position: | 187-503 |
Cow position: | chr9:4532956-4532643 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 233 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 28, 174 |
Conread position: | 187-503 |
Cow position: | chr9:6050586-6050896 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 218 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 26, 152 |
Conread position: | 187-503 |
Cow position: | chr9:7003247-7002934 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 230 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 28, 176 |
Conread position: | 187-503 |
Cow position: | chr9:18509340-18509651 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 225 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 29, 168 |
Conread position: | 187-503 |
Cow position: | chr9:29027740-29028049 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 224 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 28, 160 |
Conread position: | 187-503 |
Cow position: | chr9:29628288-29628595 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 227 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 29, 136 |
Conread position: | 187-503 |
Cow position: | chr9:30672828-30672520 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 226 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 28, 83 |
Conread position: | 187-504 |
Cow position: | chr9:22654031-22653717 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 226 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 28, 160 |
Conread position: | 187-505 |
Cow position: | chr9:16176230-16175919 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 225 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 28, 172 |
Conread position: | 187-508 |
Cow position: | chr9:42569364-42569043 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 235 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 28, 67 |
Conread position: | 188-432 |
Cow position: | chr9:3727353-3727095 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 201 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 19, 40 |
Conread position: | 188-489 |
Cow position: | chr9:47002653-47002354 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 213 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 27, 169 |
Conread position: | 188-501 |
Cow position: | chr9:37970751-37971058 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 224 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 22, 165 |
Conread position: | 188-552 |
Cow position: | chr9:249622-249980 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 232 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 22, 112 |
Conread position: | 189-484 |
Cow position: | chr9:7061632-7061926 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 220 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 26, 158 |
Conread position: | 193-533 |
Cow position: | chr9:60464177-60464515 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 231 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 24, 11 |
Conread position: | 194-534 |
Cow position: | chr9:55618639-55618311 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 228 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 44, 21 |
Conread position: | 197-355 |
Cow position: | chr9:6249743-6249584 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 118 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 97, 134 |
Conread position: | 202-505 |
Cow position: | chr9:37162370-37162663 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 211 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 90, 150 |
Conread position: | 211-460 |
Cow position: | chr9:25754795-25755037 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 177 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 75, 26 |
Conread position: | 211-502 |
Cow position: | chr9:2171492-2171210 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 197 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 82, 109 |
Conread position: | 212-500 |
Cow position: | chr9:25022869-25023146 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 202 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 83, 116 |
Conread position: | 217-445 |
Cow position: | chr9:16268795-16268573 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 165 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 69, 135 |
Conread position: | 237-456 |
Cow position: | chr9:6975130-6974917 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 161 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 56, 20 |
Conread position: | 242-444 |
Cow position: | chr9:60651314-60651510 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 151 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 44, 91 |
Conread position: | 244-462 |
Cow position: | chr9:25484267-25484058 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 165 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 42, 108 |
Conread position: | 252-514 |
Cow position: | chr9:3354290-3354548 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 175 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 35, 82 |
Conread position: | 344-501 |
Cow position: | chr9:63854884-63854727 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 119 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 130, 32 |
Show alignments to all cow chromosomes.