Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8027I19.5
        

               Conread position:
               168-326
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               168-332
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               168-416
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               101, 31
               

               Conread position:
               168-432
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               39, 187
               

               Conread position:
               168-432
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               45, 189
               

               Conread position:
               168-440
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               197
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               47, 167
               

               Conread position:
               168-445
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               208
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               47, 168
               

               Conread position:
               168-445
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               205
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               47, 111
               

               Conread position:
               168-445
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               206
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-455
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               281, 47
               

               Conread position:
               168-458
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               211
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               36, 171
               

               Conread position:
               168-458
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               39, 219
               

               Conread position:
               168-458
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               117, 54
               

               Conread position:
               168-458
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               211
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-458
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               215
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-458
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               47, 148
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-460
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               213
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               48, 189
               

               Conread position:
               168-462
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               218
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-466
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               47, 62
               

               Conread position:
               168-503
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               48, 215
               

               Conread position:
               168-512
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               242
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               33, 178
               

               Conread position:
               168-525
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               248
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               42, 179
               

               Conread position:
               168-551
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 187
               

               Conread position:
               168-552
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               168-552
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               266
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               51, 47
               

               Conread position:
               169-432
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               17, 102
               

               Conread position:
               169-487
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               226
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               14, 190
               

               Conread position:
               169-512
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 171
               

               Conread position:
               170-418
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               43, 172
               

               Conread position:
               171-488
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               40, 125
               

               Conread position:
               171-523
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               247
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               49, 44
               

               Conread position:
               171-527
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               242
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               44, 25
               

               Conread position:
               171-529
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               248
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               44, 164
               

               Conread position:
               171-531
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               36, 189
               

               Conread position:
               171-553
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               254
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               41, 99
               

               Conread position:
               172-460
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               213
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               43, 166
               

               Conread position:
               172-509
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               44, 116
               

               Conread position:
               172-509
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               43, 10
               

               Conread position:
               173-503
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               40, 166
               

               Conread position:
               173-525
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               253
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               43, 9
               

               Conread position:
               173-552
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 176
               

               Conread position:
               175-489
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 209
               

               Conread position:
               177-550
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 54
               

               Conread position:
               181-518
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               42, 164
               

               Conread position:
               182-503
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               230
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               14, 176
               

               Conread position:
               182-536
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               244
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               33, 175
               

               Conread position:
               187-346
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               28, 83
               

               Conread position:
               187-441
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               48, 28
               

               Conread position:
               187-445
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               22, 152
               

               Conread position:
               187-460
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               26, 170
               

               Conread position:
               187-470
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               28, 170
               

               Conread position:
               187-470
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               29, 64
               

               Conread position:
               187-485
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               219
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               28, 167
               

               Conread position:
               187-496
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 147
               

               Conread position:
               187-499
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               226
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               28, 171
               

               Conread position:
               187-502
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               229
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               28, 133
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               28, 174
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               26, 152
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               230
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               28, 176
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               225
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               29, 168
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               224
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               28, 160
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               227
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               29, 136
               

               Conread position:
               187-503
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               28, 83
               

               Conread position:
               187-504
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               28, 160
               

               Conread position:
               187-505
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               28, 172
               

               Conread position:
               187-508
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               235
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               188-432
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               201
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               19, 40
               

               Conread position:
               188-489
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               27, 169
               

               Conread position:
               188-501
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               224
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               22, 165
               

               Conread position:
               188-552
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               232
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               22, 112
               

               Conread position:
               189-484
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               220
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               26, 158
               

               Conread position:
               193-533
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               24, 11
               

               Conread position:
               194-534
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               228
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               44, 21
               

               Conread position:
               197-355
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               97, 134
               

               Conread position:
               202-505
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               211
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               90, 150
               

               Conread position:
               211-460
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               75, 26
               

               Conread position:
               211-502
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               197
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               82, 109
               

               Conread position:
               212-500
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               83, 116
               

               Conread position:
               217-445
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               69, 135
               

               Conread position:
               237-456
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               56, 20
               

               Conread position:
               242-444
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               44, 91
               

               Conread position:
               244-462
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               42, 108
               

               Conread position:
               252-514
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               35, 82
               

               Conread position:
               344-501
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               130, 32
               
Show alignments to all cow chromosomes.