Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8027I19.5 |
| Conread position: | 10-292 |
| Cow position: | chrX:18953221-18953514 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 136, 90 |
| Conread position: | 157-571 |
| Cow position: | chrX:44387523-44387101 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 282 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 12, 98 |
| Conread position: | 162-520 |
| Cow position: | chrX:40246485-40246842 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 172 |
| Conread position: | 163-489 |
| Cow position: | chrX:29853173-29853498 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 235 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 15, 7 |
| Conread position: | 168-327 |
| Cow position: | chrX:27624379-27624213 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 168-335 |
| Cow position: | chrX:41411567-41411394 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 47, 168 |
| Conread position: | 168-399 |
| Cow position: | chrX:28870795-28871023 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 186 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 47, 24 |
| Conread position: | 168-407 |
| Cow position: | chrX:506948-507186 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 47, 168 |
| Conread position: | 168-427 |
| Cow position: | chrX:29911042-29911300 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 48, 189 |
| Conread position: | 168-431 |
| Cow position: | chrX:9008721-9008459 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 47, 168 |
| Conread position: | 168-432 |
| Cow position: | chrX:9125746-9125475 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 200 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 40, 77 |
| Conread position: | 168-432 |
| Cow position: | chrX:12288020-12288274 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 196 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 118, 47 |
| Conread position: | 168-432 |
| Cow position: | chrX:15980573-15980830 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 118, 11 |
| Conread position: | 168-436 |
| Cow position: | chrX:19874207-19873952 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 53, 59 |
| Conread position: | 168-444 |
| Cow position: | chrX:11148950-11149209 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 41, 102 |
| Conread position: | 168-444 |
| Cow position: | chrX:15179042-15179323 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 167 |
| Conread position: | 168-444 |
| Cow position: | chrX:22611329-22611055 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 47, 94 |
| Conread position: | 168-445 |
| Cow position: | chrX:6872690-6872966 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 47, 189 |
| Conread position: | 168-445 |
| Cow position: | chrX:8480033-8479756 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 171 |
| Conread position: | 168-445 |
| Cow position: | chrX:13076314-13076590 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 47, 172 |
| Conread position: | 168-445 |
| Cow position: | chrX:13096888-13097164 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 47, 172 |
| Conread position: | 168-458 |
| Cow position: | chrX:2102241-2101956 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 150 |
| Conread position: | 168-458 |
| Cow position: | chrX:2562474-2562760 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 47, 171 |
| Conread position: | 168-458 |
| Cow position: | chrX:5394618-5394904 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 47, 74 |
| Conread position: | 168-458 |
| Cow position: | chrX:7030565-7030283 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 39, 146 |
| Conread position: | 168-458 |
| Cow position: | chrX:7752282-7751997 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 47, 171 |
| Conread position: | 168-458 |
| Cow position: | chrX:10531175-10531461 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 40, 189 |
| Conread position: | 168-458 |
| Cow position: | chrX:12279887-12280173 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 47, 189 |
| Conread position: | 168-458 |
| Cow position: | chrX:12343337-12343053 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 217 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 47, 152 |
| Conread position: | 168-458 |
| Cow position: | chrX:14595154-14594868 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 217 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 47, 189 |
| Conread position: | 168-458 |
| Cow position: | chrX:20315679-20315958 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 47, 189 |
| Conread position: | 168-458 |
| Cow position: | chrX:21340786-21340501 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 40, 173 |
| Conread position: | 168-458 |
| Cow position: | chrX:26399798-26400080 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 211 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 46, 185 |
| Conread position: | 168-458 |
| Cow position: | chrX:28561832-28562117 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 47, 145 |
| Conread position: | 168-458 |
| Cow position: | chrX:32066779-32067059 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 47, 183 |
| Conread position: | 168-458 |
| Cow position: | chrX:39563550-39563834 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 43, 187 |
| Conread position: | 168-460 |
| Cow position: | chrX:983045-982730 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 168-460 |
| Cow position: | chrX:5336103-5336394 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 47, 189 |
| Conread position: | 168-460 |
| Cow position: | chrX:7482015-7481724 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 47, 189 |
| Conread position: | 168-460 |
| Cow position: | chrX:11464619-11464910 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 212 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 47, 189 |
| Conread position: | 168-460 |
| Cow position: | chrX:12353623-12353332 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 214 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 47, 189 |
| Conread position: | 168-460 |
| Cow position: | chrX:13397737-13398028 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 47, 189 |
| Conread position: | 168-460 |
| Cow position: | chrX:16812212-16812503 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 33, 83 |
| Conread position: | 168-460 |
| Cow position: | chrX:21304142-21304434 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 209 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 47, 168 |
| Conread position: | 168-460 |
| Cow position: | chrX:27425937-27426228 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 214 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 47, 189 |
| Conread position: | 168-460 |
| Cow position: | chrX:28585363-28585072 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 209 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 48, 189 |
| Conread position: | 168-460 |
| Cow position: | chrX:28634035-28634324 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 45, 74 |
| Conread position: | 168-460 |
| Cow position: | chrX:37849396-37849107 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 47, 74 |
| Conread position: | 168-461 |
| Cow position: | chrX:3420807-3421094 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 40, 118 |
| Conread position: | 168-464 |
| Cow position: | chrX:7093981-7093688 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 219 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 47, 168 |
| Conread position: | 168-469 |
| Cow position: | chrX:3375729-3376030 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 223 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 47, 193 |
| Conread position: | 168-470 |
| Cow position: | chrX:1834201-1833909 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 47, 189 |
| Conread position: | 168-470 |
| Cow position: | chrX:24089785-24089485 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 227 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 47, 190 |
| Conread position: | 168-474 |
| Cow position: | chrX:8588561-8588258 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 47, 189 |
| Conread position: | 168-475 |
| Cow position: | chrX:30011422-30011116 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 221 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 48, 189 |
| Conread position: | 168-478 |
| Cow position: | chrX:30173288-30173591 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 47, 189 |
| Conread position: | 168-487 |
| Cow position: | chrX:2604431-2604113 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 223 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 47, 189 |
| Conread position: | 168-487 |
| Cow position: | chrX:23019712-23019394 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 219 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 53, 188 |
| Conread position: | 168-487 |
| Cow position: | chrX:35530245-35529927 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 47, 189 |
| Conread position: | 168-496 |
| Cow position: | chrX:5863780-5863460 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 47, 102 |
| Conread position: | 168-496 |
| Cow position: | chrX:31493803-31493482 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 233 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 47, 191 |
| Conread position: | 168-497 |
| Cow position: | chrX:5323340-5323663 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 237 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 47, 171 |
| Conread position: | 168-498 |
| Cow position: | chrX:18659399-18659725 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 241 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 47, 168 |
| Conread position: | 168-500 |
| Cow position: | chrX:971158-970828 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 233 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 47, 189 |
| Conread position: | 168-505 |
| Cow position: | chrX:30178604-30178939 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 38, 176 |
| Conread position: | 168-507 |
| Cow position: | chrX:2536063-2536399 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 47, 208 |
| Conread position: | 168-507 |
| Cow position: | chrX:17667511-17667843 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 236 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 47, 175 |
| Conread position: | 168-513 |
| Cow position: | chrX:10416908-10417258 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 150 |
| Conread position: | 168-534 |
| Cow position: | chrX:18534853-18534507 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 255 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 47, 23 |
| Conread position: | 168-534 |
| Cow position: | chrX:29779111-29779462 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 258 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 39, 11 |
| Conread position: | 168-550 |
| Cow position: | chrX:13417041-13417417 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 98 |
| Conread position: | 168-551 |
| Cow position: | chrX:20797359-20796979 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 48, 20 |
| Conread position: | 168-552 |
| Cow position: | chrX:20696716-20697087 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 48, 164 |
| Conread position: | 168-570 |
| Cow position: | chrX:6250048-6250454 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 79 |
| Conread position: | 169-459 |
| Cow position: | chrX:21490580-21490290 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 215 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 13, 168 |
| Conread position: | 171-414 |
| Cow position: | chrX:41850814-41851055 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 37, 185 |
| Conread position: | 171-419 |
| Cow position: | chrX:1942365-1942609 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 43, 184 |
| Conread position: | 171-421 |
| Cow position: | chrX:14786506-14786751 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 36, 183 |
| Conread position: | 171-425 |
| Cow position: | chrX:28554020-28553776 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 58, 44 |
| Conread position: | 171-426 |
| Cow position: | chrX:3407435-3407688 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 44, 19 |
| Conread position: | 171-437 |
| Cow position: | chrX:16238163-16237898 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 44, 186 |
| Conread position: | 171-445 |
| Cow position: | chrX:27987442-27987735 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 37, 224 |
| Conread position: | 171-458 |
| Cow position: | chrX:18219777-18219494 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 217 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 44, 168 |
| Conread position: | 171-458 |
| Cow position: | chrX:22525224-22525507 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 44, 165 |
| Conread position: | 171-460 |
| Cow position: | chrX:12654382-12654668 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 44, 100 |
| Conread position: | 171-460 |
| Cow position: | chrX:30055355-30055643 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 213 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 38, 186 |
| Conread position: | 171-487 |
| Cow position: | chrX:16362744-16363059 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 227 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 44, 186 |
| Conread position: | 171-500 |
| Cow position: | chrX:20359671-20359993 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 44, 168 |
| Conread position: | 171-500 |
| Cow position: | chrX:24484030-24484352 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 44, 166 |
| Conread position: | 171-505 |
| Cow position: | chrX:29885373-29885039 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 45, 165 |
| Conread position: | 171-507 |
| Cow position: | chrX:26998459-26998123 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 53, 44 |
| Conread position: | 171-528 |
| Cow position: | chrX:26427265-26427617 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 74 |
| Conread position: | 171-531 |
| Cow position: | chrX:13053406-13053054 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 8, 125 |
| Conread position: | 172-460 |
| Cow position: | chrX:37812540-37812254 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 43, 59 |
| Conread position: | 172-470 |
| Cow position: | chrX:22618929-22619226 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 220 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 43, 164 |
| Conread position: | 173-529 |
| Cow position: | chrX:21829909-21829551 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 42, 184 |
| Conread position: | 173-537 |
| Cow position: | chrX:41888608-41888981 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 246 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 42, 116 |
| Conread position: | 175-553 |
| Cow position: | chrX:2012291-2012651 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 254 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 341, 17 |
| Conread position: | 175-553 |
| Cow position: | chrX:22129862-22130254 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 271 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 40, 87 |
| Conread position: | 177-432 |
| Cow position: | chrX:12803491-12803744 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 38, 54 |
| Conread position: | 179-458 |
| Cow position: | chrX:28758275-28758544 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 107, 36 |
| Conread position: | 186-503 |
| Cow position: | chrX:30231730-30232050 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 225 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 29, 196 |
| Conread position: | 186-553 |
| Cow position: | chrX:24112462-24112823 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 80 |
| Conread position: | 187-415 |
| Cow position: | chrX:30711954-30711727 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 28, 170 |
| Conread position: | 187-429 |
| Cow position: | chrX:320834-320593 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 28, 170 |
| Conread position: | 187-429 |
| Cow position: | chrX:27495288-27495052 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 27, 170 |
| Conread position: | 187-431 |
| Cow position: | chrX:20720354-20720111 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 28, 170 |
| Conread position: | 187-441 |
| Cow position: | chrX:26758236-26758489 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 28, 170 |
| Conread position: | 187-499 |
| Cow position: | chrX:29096572-29096259 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 27, 170 |
| Conread position: | 187-503 |
| Cow position: | chrX:2482265-2482580 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 228 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 28, 171 |
| Conread position: | 187-503 |
| Cow position: | chrX:15126872-15127184 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 42, 28 |
| Conread position: | 187-503 |
| Cow position: | chrX:16699671-16699358 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 28, 170 |
| Conread position: | 187-503 |
| Cow position: | chrX:21223292-21222986 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 224 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 28, 55 |
| Conread position: | 187-503 |
| Cow position: | chrX:23040758-23041065 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 227 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 28, 158 |
| Conread position: | 187-503 |
| Cow position: | chrX:23277387-23277078 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 231 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 12, 66 |
| Conread position: | 187-503 |
| Cow position: | chrX:23418634-23418954 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 216 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 29, 140 |
| Conread position: | 187-503 |
| Cow position: | chrX:26528345-26528034 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 29, 154 |
| Conread position: | 187-503 |
| Cow position: | chrX:30183523-30183836 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 229 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 28, 149 |
| Conread position: | 187-522 |
| Cow position: | chrX:13412768-13413099 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 240 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 28, 170 |
| Conread position: | 188-474 |
| Cow position: | chrX:26766829-26767113 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 27, 169 |
| Conread position: | 188-487 |
| Cow position: | chrX:29950219-29950519 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 25, 151 |
| Conread position: | 188-513 |
| Cow position: | chrX:23071070-23070760 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 97, 34 |
| Conread position: | 188-528 |
| Cow position: | chrX:7540458-7540114 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 27, 83 |
| Conread position: | 190-433 |
| Cow position: | chrX:5833075-5833312 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 101, 162 |
| Conread position: | 191-505 |
| Cow position: | chrX:13084360-13084677 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 95, 20 |
| Conread position: | 191-525 |
| Cow position: | chrX:6282387-6282708 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 10, 26 |
| Conread position: | 192-508 |
| Cow position: | chrX:23319206-23319516 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 23, 80 |
| Conread position: | 193-516 |
| Cow position: | chrX:29285804-29285481 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 231 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 22, 155 |
| Conread position: | 194-445 |
| Cow position: | chrX:29793760-29794005 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 21, 141 |
| Conread position: | 194-507 |
| Cow position: | chrX:31082332-31082019 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 22, 48 |
| Conread position: | 202-439 |
| Cow position: | chrX:21589318-21589087 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 84, 128 |
| Conread position: | 202-470 |
| Cow position: | chrX:31198791-31198530 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 188 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 92, 154 |
| Conread position: | 202-472 |
| Cow position: | chrX:21579817-21579554 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 93, 38 |
| Conread position: | 202-523 |
| Cow position: | chrX:7306038-7305720 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 93, 54 |
| Conread position: | 202-531 |
| Cow position: | chrX:47398224-47398571 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 80, 177 |
| Conread position: | 211-497 |
| Cow position: | chrX:33214618-33214335 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 81, 121 |
| Conread position: | 211-503 |
| Cow position: | chrX:23391257-23391541 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 80, 141 |
| Conread position: | 211-516 |
| Cow position: | chrX:6014722-6015029 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 71, 47 |
| Conread position: | 213-511 |
| Cow position: | chrX:30056993-30056706 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 69, 120 |
| Conread position: | 222-460 |
| Cow position: | chrX:8455077-8454844 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 45, 131 |
| Conread position: | 228-529 |
| Cow position: | chrX:5298899-5299196 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 67, 127 |
| Conread position: | 230-503 |
| Cow position: | chrX:12669536-12669806 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 10, 102 |
| Conread position: | 239-427 |
| Cow position: | chrX:22582416-22582601 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 47, 94 |
| Conread position: | 246-460 |
| Cow position: | chrX:17478222-17478430 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 40, 106 |
| Conread position: | 246-496 |
| Cow position: | chrX:20874655-20874902 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 255-460 |
| Cow position: | chrX:11433992-11433793 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 31, 78 |
| Conread position: | 261-503 |
| Cow position: | chrX:22488473-22488239 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 34, 73 |
| Conread position: | 265-458 |
| Cow position: | chrX:29947988-29947804 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 21, 87 |
| Conread position: | 281-503 |
| Cow position: | chrX:18954255-18954467 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 326-548 |
| Cow position: | chrX:29815085-29814856 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 58, 48 |
| Conread position: | 343-527 |
| Cow position: | chrX:29928126-29928307 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 344-550 |
| Cow position: | chrX:41888747-41888952 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 140, 30 |
| Conread position: | 345-527 |
| Cow position: | chrX:6885082-6885266 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 131, 29 |
| Conread position: | 357-528 |
| Cow position: | chrX:28872826-28872993 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 74, 11 |
Show alignments to all cow chromosomes.