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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8027M23.3
        

               
Conread position:
               
294-580
               

               
Cow position:
               
chr13:5713557-5713275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
179, 36
               

               
Conread position:
               
296-637
               

               
Cow position:
               
chr13:61166192-61166535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 95
               

               
Conread position:
               
299-565
               

               
Cow position:
               
chr13:33517666-33517939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
108, 31
               

               
Conread position:
               
300-453
               

               
Cow position:
               
chr13:41360010-41359851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
301-762
               

               
Cow position:
               
chr13:19023583-19024067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
75, 16
               

               
Conread position:
               
303-766
               

               
Cow position:
               
chr13:1231906-1231423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
14, 53
               

               
Conread position:
               
304-764
               

               
Cow position:
               
chr13:32017270-32017736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
100, 26
               

               
Conread position:
               
306-765
               

               
Cow position:
               
chr13:19882785-19883252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 24
               

               
Conread position:
               
307-633
               

               
Cow position:
               
chr13:46324537-46324870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
43, 99
               

               
Conread position:
               
308-472
               

               
Cow position:
               
chr13:21524674-21524508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
96, 22
               

               
Conread position:
               
308-488
               

               
Cow position:
               
chr13:20834608-20834790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
99, 22
               

               
Conread position:
               
308-489
               

               
Cow position:
               
chr13:15740315-15740129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
99, 22
               

               
Conread position:
               
308-556
               

               
Cow position:
               
chr13:8824513-8824268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
99, 20
               

               
Conread position:
               
308-580
               

               
Cow position:
               
chr13:1011581-1011303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
99, 22
               

               
Conread position:
               
308-600
               

               
Cow position:
               
chr13:20683195-20682901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
98, 22
               

               
Conread position:
               
308-629
               

               
Cow position:
               
chr13:36352719-36353034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
22, 38
               

               
Conread position:
               
308-631
               

               
Cow position:
               
chr13:5658482-5658804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
99, 20
               

               
Conread position:
               
308-631
               

               
Cow position:
               
chr13:38898004-38898322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
137, 22
               

               
Conread position:
               
308-633
               

               
Cow position:
               
chr13:12614509-12614172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
99, 22
               

               
Conread position:
               
308-633
               

               
Cow position:
               
chr13:19364493-19364159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
99, 22
               

               
Conread position:
               
308-633
               

               
Cow position:
               
chr13:20605870-20606198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 22
               

               
Conread position:
               
308-633
               

               
Cow position:
               
chr13:33875911-33875594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
137, 23
               

               
Conread position:
               
308-633
               

               
Cow position:
               
chr13:34508125-34507805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
97, 22
               

               
Conread position:
               
308-633
               

               
Cow position:
               
chr13:40652182-40651853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
85, 22
               

               
Conread position:
               
308-633
               

               
Cow position:
               
chr13:45604169-45604497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
99, 22
               

               
Conread position:
               
308-636
               

               
Cow position:
               
chr13:19138686-19138356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
99, 11
               

               
Conread position:
               
308-637
               

               
Cow position:
               
chr13:23269964-23270290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
99, 22
               

               
Conread position:
               
308-637
               

               
Cow position:
               
chr13:23960557-23960887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
60, 23
               

               
Conread position:
               
308-652
               

               
Cow position:
               
chr13:45726128-45725792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
136, 22
               

               
Conread position:
               
308-653
               

               
Cow position:
               
chr13:37382060-37381700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
36, 22
               

               
Conread position:
               
308-659
               

               
Cow position:
               
chr13:18244105-18243755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 22
               

               
Conread position:
               
308-677
               

               
Cow position:
               
chr13:31814116-31813752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 11
               

               
Conread position:
               
308-685
               

               
Cow position:
               
chr13:7663180-7663552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
30, 13
               

               
Conread position:
               
308-693
               

               
Cow position:
               
chr13:60974324-60973943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
137, 22
               

               
Conread position:
               
308-715
               

               
Cow position:
               
chr13:18989954-18989563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
99, 22
               

               
Conread position:
               
308-721
               

               
Cow position:
               
chr13:47756624-47756184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
30, 22
               

               
Conread position:
               
308-749
               

               
Cow position:
               
chr13:971649-972099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 24
               

               
Conread position:
               
308-749
               

               
Cow position:
               
chr13:25927041-25926586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 22
               

               
Conread position:
               
308-758
               

               
Cow position:
               
chr13:15872698-15872226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
99, 22
               

               
Conread position:
               
308-759
               

               
Cow position:
               
chr13:52894391-52893936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
99, 22
               

               
Conread position:
               
308-759
               

               
Cow position:
               
chr13:61976716-61977170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 23
               

               
Conread position:
               
308-760
               

               
Cow position:
               
chr13:34728590-34729054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
99, 22
               

               
Conread position:
               
308-761
               

               
Cow position:
               
chr13:21235436-21235883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 22
               

               
Conread position:
               
308-764
               

               
Cow position:
               
chr13:38329882-38329399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 438
               

               
Conread position:
               
308-765
               

               
Cow position:
               
chr13:24754133-24753675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
95, 22
               

               
Conread position:
               
308-765
               

               
Cow position:
               
chr13:35660002-35659535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 22
               

               
Conread position:
               
308-765
               

               
Cow position:
               
chr13:44278603-44278127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
104, 22
               

               
Conread position:
               
308-766
               

               
Cow position:
               
chr13:12875736-12876198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
137, 25
               

               
Conread position:
               
308-766
               

               
Cow position:
               
chr13:32283376-32282907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
81, 24
               

               
Conread position:
               
308-766
               

               
Cow position:
               
chr13:40722461-40722911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
99, 22
               

               
Conread position:
               
308-767
               

               
Cow position:
               
chr13:17821011-17821477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 22
               

               
Conread position:
               
309-492
               

               
Cow position:
               
chr13:27985177-27985366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
309-554
               

               
Cow position:
               
chr13:55406413-55406660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
11, 71
               

               
Conread position:
               
309-580
               

               
Cow position:
               
chr13:21155241-21155522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
98, 21
               

               
Conread position:
               
309-620
               

               
Cow position:
               
chr13:4038128-4037826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
98, 21
               

               
Conread position:
               
309-635
               

               
Cow position:
               
chr13:21176076-21176405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
79, 21
               

               
Conread position:
               
309-636
               

               
Cow position:
               
chr13:15958871-15958530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
23, 10
               

               
Conread position:
               
309-688
               

               
Cow position:
               
chr13:20563246-20562861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
98, 338
               

               
Conread position:
               
309-700
               

               
Cow position:
               
chr13:16015055-16014667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
136, 21
               

               
Conread position:
               
309-728
               

               
Cow position:
               
chr13:53574205-53573792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
133, 16
               

               
Conread position:
               
309-737
               

               
Cow position:
               
chr13:34035616-34035183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
96, 24
               

               
Conread position:
               
310-464
               

               
Cow position:
               
chr13:8779641-8779485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
97, 11
               

               
Conread position:
               
311-580
               

               
Cow position:
               
chr13:54093989-54093717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
19, 96
               

               
Conread position:
               
312-765
               

               
Cow position:
               
chr13:9587336-9587810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
20, 34
               

               
Conread position:
               
313-766
               

               
Cow position:
               
chr13:10924659-10925145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
17, 59
               

               
Conread position:
               
314-759
               

               
Cow position:
               
chr13:20466049-20466480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
18, 35
               

               
Conread position:
               
319-489
               

               
Cow position:
               
chr13:3003688-3003507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
319-490
               

               
Cow position:
               
chr13:6606779-6606958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
11, 155
               

               
Conread position:
               
319-490
               

               
Cow position:
               
chr13:38277896-38278070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
11, 114
               

               
Conread position:
               
319-556
               

               
Cow position:
               
chr13:19426457-19426702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
11, 88
               

               
Conread position:
               
319-566
               

               
Cow position:
               
chr13:16155477-16155726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
11, 27
               

               
Conread position:
               
319-616
               

               
Cow position:
               
chr13:16024829-16024525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
11, 27
               

               
Conread position:
               
319-633
               

               
Cow position:
               
chr13:13306347-13306015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
11, 252
               

               
Conread position:
               
319-633
               

               
Cow position:
               
chr13:20814039-20814351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
11, 165
               

               
Conread position:
               
319-633
               

               
Cow position:
               
chr13:20816554-20816242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
11, 165
               

               
Conread position:
               
319-637
               

               
Cow position:
               
chr13:34941416-34941735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
11, 34
               

               
Conread position:
               
319-679
               

               
Cow position:
               
chr13:3315432-3315798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
11, 221
               

               
Conread position:
               
319-680
               

               
Cow position:
               
chr13:889938-890297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 88
               

               
Conread position:
               
319-693
               

               
Cow position:
               
chr13:12546666-12547057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
11, 26
               

               
Conread position:
               
319-693
               

               
Cow position:
               
chr13:60429838-60430220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
11, 27
               

               
Conread position:
               
319-728
               

               
Cow position:
               
chr13:20666147-20666567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 29
               

               
Conread position:
               
319-729
               

               
Cow position:
               
chr13:12408043-12408478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
11, 25
               

               
Conread position:
               
319-749
               

               
Cow position:
               
chr13:27525021-27525461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 27
               

               
Conread position:
               
319-763
               

               
Cow position:
               
chr13:20880685-20881137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 317
               

               
Conread position:
               
319-763
               

               
Cow position:
               
chr13:44323144-44322675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 207
               

               
Conread position:
               
319-764
               

               
Cow position:
               
chr13:11821381-11820943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
156, 86
               

               
Conread position:
               
319-764
               

               
Cow position:
               
chr13:12990086-12989645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 208
               

               
Conread position:
               
319-764
               

               
Cow position:
               
chr13:17291890-17292345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 27
               

               
Conread position:
               
319-765
               

               
Cow position:
               
chr13:311671-311214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
11, 227
               

               
Conread position:
               
319-766
               

               
Cow position:
               
chr13:1170709-1170239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
11, 88
               

               
Conread position:
               
319-766
               

               
Cow position:
               
chr13:18166971-18166513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 110
               

               
Conread position:
               
320-458
               

               
Cow position:
               
chr13:48378332-48378480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
320-464
               

               
Cow position:
               
chr13:46329224-46329376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
320-522
               

               
Cow position:
               
chr13:1767007-1766799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
10, 112
               

               
Conread position:
               
320-527
               

               
Cow position:
               
chr13:20536737-20536526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
320-536
               

               
Cow position:
               
chr13:43629540-43629762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
125, 8
               

               
Conread position:
               
320-539
               

               
Cow position:
               
chr13:6945613-6945378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
320-560
               

               
Cow position:
               
chr13:15172167-15172422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
320-579
               

               
Cow position:
               
chr13:5752183-5752455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
320-598
               

               
Cow position:
               
chr13:52922328-52922049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
10, 65
               

               
Conread position:
               
320-615
               

               
Cow position:
               
chr13:17800312-17800009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 201
               

               
Conread position:
               
320-624
               

               
Cow position:
               
chr13:24376730-24376421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 167
               

               
Conread position:
               
320-625
               

               
Cow position:
               
chr13:41918926-41919229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
125, 13
               

               
Conread position:
               
320-634
               

               
Cow position:
               
chr13:32535893-32535575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
10, 25
               

               
Conread position:
               
320-636
               

               
Cow position:
               
chr13:25531552-25531874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 8
               

               
Conread position:
               
320-636
               

               
Cow position:
               
chr13:50690152-50690482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
10, 192
               

               
Conread position:
               
320-637
               

               
Cow position:
               
chr13:6153539-6153869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
10, 235
               

               
Conread position:
               
320-643
               

               
Cow position:
               
chr13:33631360-33631038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
7, 144
               

               
Conread position:
               
320-653
               

               
Cow position:
               
chr13:7010709-7010372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
10, 234
               

               
Conread position:
               
320-659
               

               
Cow position:
               
chr13:53566836-53566494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 26
               

               
Conread position:
               
320-662
               

               
Cow position:
               
chr13:11460863-11460523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 24
               

               
Conread position:
               
320-676
               

               
Cow position:
               
chr13:18835426-18835084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 87
               

               
Conread position:
               
320-676
               

               
Cow position:
               
chr13:37981515-37981864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
12, 29
               

               
Conread position:
               
320-678
               

               
Cow position:
               
chr13:37484030-37484401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 352
               

               
Conread position:
               
320-688
               

               
Cow position:
               
chr13:33352127-33352487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
10, 127
               

               
Conread position:
               
320-688
               

               
Cow position:
               
chr13:45022968-45023349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 17
               

               
Conread position:
               
320-688
               

               
Cow position:
               
chr13:46182023-46181653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 8
               

               
Conread position:
               
320-691
               

               
Cow position:
               
chr13:8609312-8609694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
68, 8
               

               
Conread position:
               
320-693
               

               
Cow position:
               
chr13:20705963-20706342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 26
               

               
Conread position:
               
320-693
               

               
Cow position:
               
chr13:23856455-23856066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 56
               

               
Conread position:
               
320-700
               

               
Cow position:
               
chr13:6086661-6087036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
10, 26
               

               
Conread position:
               
320-747
               

               
Cow position:
               
chr13:57493944-57494373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 26
               

               
Conread position:
               
320-748
               

               
Cow position:
               
chr13:8195322-8194895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
10, 160
               

               
Conread position:
               
320-748
               

               
Cow position:
               
chr13:8362506-8362948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
10, 59
               

               
Conread position:
               
320-749
               

               
Cow position:
               
chr13:26479974-26480405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
13, 220
               

               
Conread position:
               
320-749
               

               
Cow position:
               
chr13:47007498-47007915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 24
               

               
Conread position:
               
320-763
               

               
Cow position:
               
chr13:6189393-6189817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
125, 10
               

               
Conread position:
               
320-763
               

               
Cow position:
               
chr13:12670205-12670668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 65
               

               
Conread position:
               
320-763
               

               
Cow position:
               
chr13:26098382-26097967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
10, 25
               

               
Conread position:
               
320-763
               

               
Cow position:
               
chr13:46525203-46525645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 33
               

               
Conread position:
               
320-763
               

               
Cow position:
               
chr13:51528206-51528654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 183
               

               
Conread position:
               
320-764
               

               
Cow position:
               
chr13:12574874-12574400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
10, 87
               

               
Conread position:
               
320-764
               

               
Cow position:
               
chr13:54702430-54701964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 40
               

               
Conread position:
               
320-765
               

               
Cow position:
               
chr13:9142522-9142055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
7, 24
               

               
Conread position:
               
320-765
               

               
Cow position:
               
chr13:17158626-17159100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
10, 245
               

               
Conread position:
               
320-766
               

               
Cow position:
               
chr13:14063288-14063740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 28
               

               
Conread position:
               
320-768
               

               
Cow position:
               
chr13:41807015-41806555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 26
               

               
Conread position:
               
321-583
               

               
Cow position:
               
chr13:12682302-12682577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
11, 129
               

               
Conread position:
               
321-637
               

               
Cow position:
               
chr13:13766005-13765705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
321-681
               

               
Cow position:
               
chr13:8524382-8524748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 153
               

               
Conread position:
               
321-700
               

               
Cow position:
               
chr13:20683884-20684275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
9, 32
               

               
Conread position:
               
321-765
               

               
Cow position:
               
chr13:20820602-20821057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
9, 25
               

               
Conread position:
               
322-637
               

               
Cow position:
               
chr13:11954878-11955202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
122, 24
               

               
Conread position:
               
322-662
               

               
Cow position:
               
chr13:11820815-11820489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
5, 74
               

               
Conread position:
               
323-487
               

               
Cow position:
               
chr13:29671206-29671373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
84, 20
               

               
Conread position:
               
323-633
               

               
Cow position:
               
chr13:54345012-54344699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
21, 223
               

               
Conread position:
               
324-578
               

               
Cow position:
               
chr13:3701666-3701412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
83, 20
               

               
Conread position:
               
324-580
               

               
Cow position:
               
chr13:52879644-52879384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
83, 19
               

               
Conread position:
               
324-650
               

               
Cow position:
               
chr13:53536072-53536406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
119, 20
               

               
Conread position:
               
324-677
               

               
Cow position:
               
chr13:13176883-13176523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 112
               

               
Conread position:
               
324-688
               

               
Cow position:
               
chr13:9246948-9246600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
121, 81
               

               
Conread position:
               
324-759
               

               
Cow position:
               
chr13:13089257-13088820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 20
               

               
Conread position:
               
324-763
               

               
Cow position:
               
chr13:38283750-38284188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 176
               

               
Conread position:
               
324-766
               

               
Cow position:
               
chr13:6079185-6079622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 172
               

               
Conread position:
               
325-604
               

               
Cow position:
               
chr13:1780066-1779777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
82, 223
               

               
Conread position:
               
326-759
               

               
Cow position:
               
chr13:57002964-57002510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
12, 101
               

               
Conread position:
               
328-471
               

               
Cow position:
               
chr13:19555982-19555838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
79, 118
               

               
Conread position:
               
328-532
               

               
Cow position:
               
chr13:48251762-48251968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
117, 77
               

               
Conread position:
               
328-580
               

               
Cow position:
               
chr13:5091431-5091697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
79, 249
               

               
Conread position:
               
328-653
               

               
Cow position:
               
chr13:28683588-28683261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
79, 16
               

               
Conread position:
               
328-659
               

               
Cow position:
               
chr13:17970805-17971136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 16
               

               
Conread position:
               
328-722
               

               
Cow position:
               
chr13:37818529-37818925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
7, 27
               

               
Conread position:
               
328-743
               

               
Cow position:
               
chr13:15288696-15289115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 41
               

               
Conread position:
               
328-747
               

               
Cow position:
               
chr13:43480291-43479861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 151
               

               
Conread position:
               
328-749
               

               
Cow position:
               
chr13:15446276-15445847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
64, 118
               

               
Conread position:
               
328-749
               

               
Cow position:
               
chr13:21708411-21708002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
79, 131
               

               
Conread position:
               
328-749
               

               
Cow position:
               
chr13:33256726-33256295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
79, 135
               

               
Conread position:
               
328-749
               

               
Cow position:
               
chr13:60966994-60966577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
117, 75
               

               
Conread position:
               
328-758
               

               
Cow position:
               
chr13:20784818-20784383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 164
               

               
Conread position:
               
328-759
               

               
Cow position:
               
chr13:55673975-55674422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 207
               

               
Conread position:
               
328-762
               

               
Cow position:
               
chr13:21276085-21275641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 165
               

               
Conread position:
               
328-763
               

               
Cow position:
               
chr13:42200848-42200404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 16
               

               
Conread position:
               
328-765
               

               
Cow position:
               
chr13:24715467-24715031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 15
               

               
Conread position:
               
328-766
               

               
Cow position:
               
chr13:6616518-6616985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
79, 145
               

               
Conread position:
               
328-766
               

               
Cow position:
               
chr13:20879605-20880047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 34
               

               
Conread position:
               
328-766
               

               
Cow position:
               
chr13:58043858-58043399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
79, 16
               

               
Conread position:
               
328-767
               

               
Cow position:
               
chr13:15234140-15233726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 15
               

               
Conread position:
               
329-453
               

               
Cow position:
               
chr13:19320978-19320853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
77, 34
               

               
Conread position:
               
329-466
               

               
Cow position:
               
chr13:17762844-17762980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
111, 83
               

               
Conread position:
               
329-467
               

               
Cow position:
               
chr13:11290591-11290732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
56, 130
               

               
Conread position:
               
329-489
               

               
Cow position:
               
chr13:38485059-38484897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
114, 15
               

               
Conread position:
               
329-490
               

               
Cow position:
               
chr13:60436654-60436821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
329-522
               

               
Cow position:
               
chr13:17994155-17993958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
88, 78
               

               
Conread position:
               
329-531
               

               
Cow position:
               
chr13:54331248-54331039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
329-533
               

               
Cow position:
               
chr13:34556103-34556318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
9, 207
               

               
Conread position:
               
329-534
               

               
Cow position:
               
chr13:46501533-46501315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
329-540
               

               
Cow position:
               
chr13:18551677-18551454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
329-540
               

               
Cow position:
               
chr13:52010357-52010569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
78, 22
               

               
Conread position:
               
329-545
               

               
Cow position:
               
chr13:8607290-8607514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
27, 36
               

               
Conread position:
               
329-546
               

               
Cow position:
               
chr13:17816000-17815774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
78, 213
               

               
Conread position:
               
329-546
               

               
Cow position:
               
chr13:21210091-21209863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
329-549
               

               
Cow position:
               
chr13:49283114-49283348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
71, 33
               

               
Conread position:
               
329-556
               

               
Cow position:
               
chr13:37516907-37517141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
78, 220
               

               
Conread position:
               
329-559
               

               
Cow position:
               
chr13:2339658-2339429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
78, 15
               

               
Conread position:
               
329-566
               

               
Cow position:
               
chr13:15822966-15822730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
78, 13
               

               
Conread position:
               
329-568
               

               
Cow position:
               
chr13:9884997-9884751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
78, 150
               

               
Conread position:
               
329-568
               

               
Cow position:
               
chr13:29122613-29122838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
113, 76
               

               
Conread position:
               
329-574
               

               
Cow position:
               
chr13:24060122-24060358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
76, 15
               

               
Conread position:
               
329-577
               

               
Cow position:
               
chr13:38012590-38012335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
78, 197
               

               
Conread position:
               
329-579
               

               
Cow position:
               
chr13:20863792-20864043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
78, 12
               

               
Conread position:
               
329-580
               

               
Cow position:
               
chr13:13266030-13265778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
116, 15
               

               
Conread position:
               
329-580
               

               
Cow position:
               
chr13:61170487-61170746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
71, 15
               

               
Conread position:
               
329-585
               

               
Cow position:
               
chr13:25261578-25261845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
15, 121
               

               
Conread position:
               
329-599
               

               
Cow position:
               
chr13:41154817-41155080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
116, 60
               

               
Conread position:
               
329-611
               

               
Cow position:
               
chr13:30693930-30693655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
104, 76
               

               
Conread position:
               
329-619
               

               
Cow position:
               
chr13:60487227-60487527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
76, 221
               

               
Conread position:
               
329-621
               

               
Cow position:
               
chr13:30026342-30026038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
15, 77
               

               
Conread position:
               
329-624
               

               
Cow position:
               
chr13:8838765-8839062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
78, 165
               

               
Conread position:
               
329-627
               

               
Cow position:
               
chr13:41253843-41253546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
116, 15
               

               
Conread position:
               
329-627
               

               
Cow position:
               
chr13:55295397-55295701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
115, 15
               

               
Conread position:
               
329-631
               

               
Cow position:
               
chr13:42860341-42860649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
76, 152
               

               
Conread position:
               
329-633
               

               
Cow position:
               
chr13:15622036-15621729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
75, 44
               

               
Conread position:
               
329-633
               

               
Cow position:
               
chr13:17613575-17613259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
329-633
               

               
Cow position:
               
chr13:20649754-20650068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
116, 75
               

               
Conread position:
               
329-633
               

               
Cow position:
               
chr13:31808741-31808440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
78, 109
               

               
Conread position:
               
329-635
               

               
Cow position:
               
chr13:6835584-6835878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
116, 14
               

               
Conread position:
               
329-636
               

               
Cow position:
               
chr13:10932781-10932467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
78, 158
               

               
Conread position:
               
329-637
               

               
Cow position:
               
chr13:17622513-17622203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
78, 61
               

               
Conread position:
               
329-637
               

               
Cow position:
               
chr13:25062639-25062328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
78, 167
               

               
Conread position:
               
329-637
               

               
Cow position:
               
chr13:43184643-43184966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
329-642
               

               
Cow position:
               
chr13:30798950-30798632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
97, 65
               

               
Conread position:
               
329-642
               

               
Cow position:
               
chr13:46458851-46458534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
78, 129
               

               
Conread position:
               
329-649
               

               
Cow position:
               
chr13:32657577-32657897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
116, 57
               

               
Conread position:
               
329-653
               

               
Cow position:
               
chr13:6060779-6061109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
74, 15
               

               
Conread position:
               
329-653
               

               
Cow position:
               
chr13:6621369-6621692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
52, 48
               

               
Conread position:
               
329-653
               

               
Cow position:
               
chr13:7076485-7076156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
72, 103
               

               
Conread position:
               
329-653
               

               
Cow position:
               
chr13:8201256-8201584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
21, 13
               

               
Conread position:
               
329-654
               

               
Cow position:
               
chr13:26383002-26383337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
78, 186
               

               
Conread position:
               
329-658
               

               
Cow position:
               
chr13:48037849-48037517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 282
               

               
Conread position:
               
329-659
               

               
Cow position:
               
chr13:10928761-10929095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 117
               

               
Conread position:
               
329-659
               

               
Cow position:
               
chr13:13261237-13260896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 290
               

               
Conread position:
               
329-662
               

               
Cow position:
               
chr13:15167047-15166708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
78, 24
               

               
Conread position:
               
329-662
               

               
Cow position:
               
chr13:15884785-15885132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 15
               

               
Conread position:
               
329-679
               

               
Cow position:
               
chr13:56154932-56155274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 162
               

               
Conread position:
               
329-688
               

               
Cow position:
               
chr13:1042727-1043106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 360
               

               
Conread position:
               
329-688
               

               
Cow position:
               
chr13:17977557-17977216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
177, 15
               

               
Conread position:
               
329-688
               

               
Cow position:
               
chr13:23166868-23167239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
78, 22
               

               
Conread position:
               
329-692
               

               
Cow position:
               
chr13:11096401-11096034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
73, 88
               

               
Conread position:
               
329-693
               

               
Cow position:
               
chr13:56148768-56148372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
78, 15
               

               
Conread position:
               
329-693
               

               
Cow position:
               
chr13:56160199-56160595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
78, 15
               

               
Conread position:
               
329-696
               

               
Cow position:
               
chr13:43762396-43762029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
20, 80
               

               
Conread position:
               
329-721
               

               
Cow position:
               
chr13:25547364-25547761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
115, 76
               

               
Conread position:
               
329-721
               

               
Cow position:
               
chr13:47963972-47964348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
78, 48
               

               
Conread position:
               
329-725
               

               
Cow position:
               
chr13:12448761-12449170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 15
               

               
Conread position:
               
329-729
               

               
Cow position:
               
chr13:23479258-23478846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 116
               

               
Conread position:
               
329-733
               

               
Cow position:
               
chr13:52057770-52057372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
21, 77
               

               
Conread position:
               
329-740
               

               
Cow position:
               
chr13:15974839-15974425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
116, 76
               

               
Conread position:
               
329-749
               

               
Cow position:
               
chr13:4664632-4665052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
15, 135
               

               
Conread position:
               
329-749
               

               
Cow position:
               
chr13:9974839-9975270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
78, 223
               

               
Conread position:
               
329-749
               

               
Cow position:
               
chr13:12045106-12045548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
65, 15
               

               
Conread position:
               
329-749
               

               
Cow position:
               
chr13:12207272-12206859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
78, 204
               

               
Conread position:
               
329-749
               

               
Cow position:
               
chr13:17114151-17114583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 45
               

               
Conread position:
               
329-749
               

               
Cow position:
               
chr13:17855603-17855165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
76, 133
               

               
Conread position:
               
329-749
               

               
Cow position:
               
chr13:24586276-24585846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 244
               

               
Conread position:
               
329-749
               

               
Cow position:
               
chr13:25434900-25435308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
116, 76
               

               
Conread position:
               
329-749
               

               
Cow position:
               
chr13:43594887-43595307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 15
               

               
Conread position:
               
329-749
               

               
Cow position:
               
chr13:52637511-52637095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
76, 128
               

               
Conread position:
               
329-751
               

               
Cow position:
               
chr13:11260481-11260073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
116, 23
               

               
Conread position:
               
329-751
               

               
Cow position:
               
chr13:26261565-26261996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
78, 172
               

               
Conread position:
               
329-755
               

               
Cow position:
               
chr13:21287861-21288293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 102
               

               
Conread position:
               
329-759
               

               
Cow position:
               
chr13:17021491-17021938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 218
               

               
Conread position:
               
329-759
               

               
Cow position:
               
chr13:21241863-21242288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 157
               

               
Conread position:
               
329-760
               

               
Cow position:
               
chr13:24369814-24369372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 308
               

               
Conread position:
               
329-762
               

               
Cow position:
               
chr13:13501393-13501828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
78, 26
               

               
Conread position:
               
329-763
               

               
Cow position:
               
chr13:14544351-14543919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
78, 232
               

               
Conread position:
               
329-763
               

               
Cow position:
               
chr13:20497881-20497426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
78, 66
               

               
Conread position:
               
329-763
               

               
Cow position:
               
chr13:34281909-34281465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 287
               

               
Conread position:
               
329-764
               

               
Cow position:
               
chr13:15041243-15041692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 222
               

               
Conread position:
               
329-764
               

               
Cow position:
               
chr13:25695539-25695984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
78, 196
               

               
Conread position:
               
329-764
               

               
Cow position:
               
chr13:25817742-25817312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 76
               

               
Conread position:
               
329-764
               

               
Cow position:
               
chr13:42114250-42113795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
78, 205
               

               
Conread position:
               
329-765
               

               
Cow position:
               
chr13:1155479-1155926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
78, 144
               

               
Conread position:
               
329-765
               

               
Cow position:
               
chr13:1959238-1958805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
95, 312
               

               
Conread position:
               
329-765
               

               
Cow position:
               
chr13:15869348-15868887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
77, 59
               

               
Conread position:
               
329-765
               

               
Cow position:
               
chr13:19393516-19393078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 132
               

               
Conread position:
               
329-765
               

               
Cow position:
               
chr13:35525985-35526412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 79
               

               
Conread position:
               
329-765
               

               
Cow position:
               
chr13:44202218-44201791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
78, 91
               

               
Conread position:
               
329-765
               

               
Cow position:
               
chr13:49805203-49804771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
78, 15
               

               
Conread position:
               
329-765
               

               
Cow position:
               
chr13:52284138-52283688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
78, 151
               

               
Conread position:
               
329-766
               

               
Cow position:
               
chr13:16247882-16247425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
94, 59
               

               
Conread position:
               
329-766
               

               
Cow position:
               
chr13:37069578-37069122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 191
               

               
Conread position:
               
329-768
               

               
Cow position:
               
chr13:23667491-23667035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
329-768
               

               
Cow position:
               
chr13:34995097-34995533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
78, 173
               

               
Conread position:
               
330-538
               

               
Cow position:
               
chr13:23816523-23816738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
67, 201
               

               
Conread position:
               
330-538
               

               
Cow position:
               
chr13:57769795-57769995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
77, 21
               

               
Conread position:
               
330-568
               

               
Cow position:
               
chr13:54237574-54237337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
77, 101
               

               
Conread position:
               
330-631
               

               
Cow position:
               
chr13:11767813-11768124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
18, 297
               

               
Conread position:
               
330-633
               

               
Cow position:
               
chr13:30651403-30651107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
77, 62
               

               
Conread position:
               
330-637
               

               
Cow position:
               
chr13:52285043-52284730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
68, 14
               

               
Conread position:
               
330-647
               

               
Cow position:
               
chr13:43194403-43194074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
330-743
               

               
Cow position:
               
chr13:5278960-5279402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
10, 76
               

               
Conread position:
               
330-756
               

               
Cow position:
               
chr13:44626608-44626157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
64, 237
               

               
Conread position:
               
330-759
               

               
Cow position:
               
chr13:19033775-19033343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
11, 75
               

               
Conread position:
               
330-764
               

               
Cow position:
               
chr13:17745470-17745040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 157
               

               
Conread position:
               
330-764
               

               
Cow position:
               
chr13:56686655-56686226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 72
               

               
Conread position:
               
331-490
               

               
Cow position:
               
chr13:37947784-37947938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
114, 39
               

               
Conread position:
               
331-529
               

               
Cow position:
               
chr13:36948943-36949150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
331-530
               

               
Cow position:
               
chr13:37980420-37980617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
142, 74
               

               
Conread position:
               
331-570
               

               
Cow position:
               
chr13:20378110-20378356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
73, 101
               

               
Conread position:
               
331-576
               

               
Cow position:
               
chr13:37945989-37946230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
114, 57
               

               
Conread position:
               
331-580
               

               
Cow position:
               
chr13:15349043-15349276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
114, 63
               

               
Conread position:
               
331-580
               

               
Cow position:
               
chr13:34052375-34052617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
76, 13
               

               
Conread position:
               
331-633
               

               
Cow position:
               
chr13:61047433-61047133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
72, 38
               

               
Conread position:
               
331-635
               

               
Cow position:
               
chr13:11061214-11060905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
49, 90
               

               
Conread position:
               
331-638
               

               
Cow position:
               
chr13:55315962-55316277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 74
               

               
Conread position:
               
331-688
               

               
Cow position:
               
chr13:17439539-17439912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 281
               

               
Conread position:
               
331-745
               

               
Cow position:
               
chr13:14927466-14927063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
76, 172
               

               
Conread position:
               
331-749
               

               
Cow position:
               
chr13:9906970-9906526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
76, 217
               

               
Conread position:
               
331-749
               

               
Cow position:
               
chr13:20174966-20174535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
114, 57
               

               
Conread position:
               
331-749
               

               
Cow position:
               
chr13:34261459-34261033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
76, 100
               

               
Conread position:
               
331-759
               

               
Cow position:
               
chr13:2774352-2773903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 66
               

               
Conread position:
               
331-766
               

               
Cow position:
               
chr13:54095031-54094608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
76, 13
               

               
Conread position:
               
332-546
               

               
Cow position:
               
chr13:54381709-54381932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
75, 12
               

               
Conread position:
               
332-631
               

               
Cow position:
               
chr13:17347034-17346731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
8, 217
               

               
Conread position:
               
332-633
               

               
Cow position:
               
chr13:60508890-60509201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
332-759
               

               
Cow position:
               
chr13:36877298-36876853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
76, 177
               

               
Conread position:
               
332-765
               

               
Cow position:
               
chr13:18852302-18851869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 88
               

               
Conread position:
               
333-572
               

               
Cow position:
               
chr13:20530918-20531169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
74, 10
               

               
Conread position:
               
333-604
               

               
Cow position:
               
chr13:37521155-37521428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
72, 206
               

               
Conread position:
               
333-676
               

               
Cow position:
               
chr13:36771200-36771540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 67
               

               
Conread position:
               
333-749
               

               
Cow position:
               
chr13:33054170-33054575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
74, 41
               

               
Conread position:
               
333-762
               

               
Cow position:
               
chr13:15192669-15193103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
112, 72
               

               
Conread position:
               
334-623
               

               
Cow position:
               
chr13:4464231-4463941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
73, 146
               

               
Conread position:
               
334-631
               

               
Cow position:
               
chr13:22886768-22887069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
52, 59
               

               
Conread position:
               
334-763
               

               
Cow position:
               
chr13:20839792-20839364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
6, 209
               

               
Conread position:
               
334-763
               

               
Cow position:
               
chr13:34263149-34263591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 71
               

               
Conread position:
               
335-578
               

               
Cow position:
               
chr13:52199312-52199060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
69, 217
               

               
Conread position:
               
335-628
               

               
Cow position:
               
chr13:21039375-21039675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
72, 220
               

               
Conread position:
               
335-634
               

               
Cow position:
               
chr13:46736424-46736133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
125, 58
               

               
Conread position:
               
335-676
               

               
Cow position:
               
chr13:12202587-12202242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 9
               

               
Conread position:
               
335-749
               

               
Cow position:
               
chr13:7059698-7059256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
72, 414
               

               
Conread position:
               
336-635
               

               
Cow position:
               
chr13:43868896-43869196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
36, 73
               

               
Conread position:
               
336-748
               

               
Cow position:
               
chr13:45073713-45074104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
195, 66
               

               
Conread position:
               
336-749
               

               
Cow position:
               
chr13:10845815-10845416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
71, 205
               

               
Conread position:
               
337-454
               

               
Cow position:
               
chr13:40491454-40491330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
337-490
               

               
Cow position:
               
chr13:22025480-22025644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
337-541
               

               
Cow position:
               
chr13:60690501-60690717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
337-573
               

               
Cow position:
               
chr13:562917-563164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
64, 216
               

               
Conread position:
               
337-574
               

               
Cow position:
               
chr13:47216031-47216279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
70, 173
               

               
Conread position:
               
337-580
               

               
Cow position:
               
chr13:18215647-18215416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
69, 126
               

               
Conread position:
               
337-585
               

               
Cow position:
               
chr13:20041740-20042003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
70, 182
               

               
Conread position:
               
337-624
               

               
Cow position:
               
chr13:37795655-37795386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
107, 67
               

               
Conread position:
               
337-635
               

               
Cow position:
               
chr13:60329971-60329676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
70, 94
               

               
Conread position:
               
337-688
               

               
Cow position:
               
chr13:51821671-51822006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
70, 108
               

               
Conread position:
               
337-699
               

               
Cow position:
               
chr13:13465569-13465915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
76, 68
               

               
Conread position:
               
337-749
               

               
Cow position:
               
chr13:5263065-5263481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
57, 165
               

               
Conread position:
               
337-765
               

               
Cow position:
               
chr13:13320997-13320579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 39
               

               
Conread position:
               
338-493
               

               
Cow position:
               
chr13:20597558-20597713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
14, 68
               

               
Conread position:
               
338-633
               

               
Cow position:
               
chr13:47356848-47356570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
22, 68
               

               
Conread position:
               
338-637
               

               
Cow position:
               
chr13:18491814-18491511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
107, 36
               

               
Conread position:
               
338-692
               

               
Cow position:
               
chr13:2414246-2413883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
107, 67
               

               
Conread position:
               
339-692
               

               
Cow position:
               
chr13:18172559-18172200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 326
               

               
Conread position:
               
339-733
               

               
Cow position:
               
chr13:17004373-17004786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
68, 51
               

               
Conread position:
               
343-580
               

               
Cow position:
               
chr13:47313122-47312889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
102, 52
               

               
Conread position:
               
343-688
               

               
Cow position:
               
chr13:8245117-8245463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
55, 119
               

               
Conread position:
               
343-747
               

               
Cow position:
               
chr13:37521517-37521949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
64, 192
               

               
Conread position:
               
343-749
               

               
Cow position:
               
chr13:37804094-37803677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
64, 42
               

               
Conread position:
               
343-751
               

               
Cow position:
               
chr13:11808760-11808377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
102, 62
               

               
Conread position:
               
344-488
               

               
Cow position:
               
chr13:11147520-11147369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
344-740
               

               
Cow position:
               
chr13:51014966-51015377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
63, 192
               

               
Conread position:
               
344-761
               

               
Cow position:
               
chr13:152165-151755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 62
               

               
Conread position:
               
344-765
               

               
Cow position:
               
chr13:43139010-43139417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
9, 96
               

               
Conread position:
               
344-767
               

               
Cow position:
               
chr13:6974374-6973941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
65, 56
               

               
Conread position:
               
347-747
               

               
Cow position:
               
chr13:19022489-19022064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 399
               

               
Conread position:
               
348-633
               

               
Cow position:
               
chr13:52227890-52228181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
59, 72
               

               
Conread position:
               
348-633
               

               
Cow position:
               
chr13:60341024-60340725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
59, 179
               

               
Conread position:
               
348-676
               

               
Cow position:
               
chr13:40943458-40943124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
56, 185
               

               
Conread position:
               
348-711
               

               
Cow position:
               
chr13:53195082-53195447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
97, 76
               

               
Conread position:
               
348-737
               

               
Cow position:
               
chr13:34375469-34375073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
97, 38
               

               
Conread position:
               
348-758
               

               
Cow position:
               
chr13:15257168-15257578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 114
               

               
Conread position:
               
348-766
               

               
Cow position:
               
chr13:45353256-45352805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
59, 403
               

               
Conread position:
               
348-767
               

               
Cow position:
               
chr13:51940941-51940523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
80, 57
               

               
Conread position:
               
352-679
               

               
Cow position:
               
chr13:9643676-9644015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
50, 192
               

               
Conread position:
               
352-700
               

               
Cow position:
               
chr13:20679551-20679195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
85, 48
               

               
Conread position:
               
352-763
               

               
Cow position:
               
chr13:46112173-46111751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
55, 75
               

               
Conread position:
               
353-759
               

               
Cow position:
               
chr13:22085546-22085944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 52
               

               
Conread position:
               
354-693
               

               
Cow position:
               
chr13:9593711-9593369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 66
               

               
Conread position:
               
354-721
               

               
Cow position:
               
chr13:37592734-37593126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
53, 205
               

               
Conread position:
               
354-749
               

               
Cow position:
               
chr13:59170861-59170442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
53, 199
               

               
Conread position:
               
354-762
               

               
Cow position:
               
chr13:19223853-19223436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
53, 144
               

               
Conread position:
               
354-762
               

               
Cow position:
               
chr13:57475213-57475632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
54, 13
               

               
Conread position:
               
357-760
               

               
Cow position:
               
chr13:20509933-20509514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
50, 199
               

               
Conread position:
               
358-658
               

               
Cow position:
               
chr13:15528828-15529143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
358-676
               

               
Cow position:
               
chr13:24230413-24230094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
26, 181
               

               
Conread position:
               
359-692
               

               
Cow position:
               
chr13:26369725-26369376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
46, 270
               

               
Conread position:
               
359-765
               

               
Cow position:
               
chr13:23512558-23512160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
86, 46
               

               
Conread position:
               
361-636
               

               
Cow position:
               
chr13:8652240-8652526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
18, 82
               

               
Conread position:
               
367-631
               

               
Cow position:
               
chr13:7032482-7032213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
40, 116
               

               
Conread position:
               
367-676
               

               
Cow position:
               
chr13:21283515-21283824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
40, 122
               

               
Conread position:
               
368-766
               

               
Cow position:
               
chr13:9846264-9846683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
39, 24
               

               
Conread position:
               
369-633
               

               
Cow position:
               
chr13:14771650-14771371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
373-627
               

               
Cow position:
               
chr13:12618924-12619190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
376-759
               

               
Cow position:
               
chr13:5758163-5758544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
31, 52
               

               
Conread position:
               
377-580
               

               
Cow position:
               
chr13:62474618-62474827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
30, 102
               

               
Conread position:
               
377-764
               

               
Cow position:
               
chr13:52055415-52055810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
30, 108
               

               
Conread position:
               
377-766
               

               
Cow position:
               
chr13:19188485-19188095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
28, 177
               

               
Conread position:
               
380-749
               

               
Cow position:
               
chr13:49503350-49503740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
27, 64
               

               
Conread position:
               
380-763
               

               
Cow position:
               
chr13:49022692-49023082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
27, 116
               

               
Conread position:
               
386-763
               

               
Cow position:
               
chr13:20473515-20473892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 82
               

               
Conread position:
               
388-748
               

               
Cow position:
               
chr13:13954218-13954597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
19, 172
               

               
Conread position:
               
390-616
               

               
Cow position:
               
chr13:4420515-4420278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
390-749
               

               
Cow position:
               
chr13:29831266-29831629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
17, 119
               

               
Conread position:
               
395-609
               

               
Cow position:
               
chr13:28652961-28652746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
12, 107
               

               
Conread position:
               
401-766
               

               
Cow position:
               
chr13:28552751-28552364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
13, 7
               

               
Conread position:
               
404-749
               

               
Cow position:
               
chr13:1363847-1363484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
6, 130
               

               
Conread position:
               
406-632
               

               
Cow position:
               
chr13:52929859-52929631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
39, 135
               

               
Conread position:
               
406-749
               

               
Cow position:
               
chr13:18999692-18999329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
38, 335
               

               
Conread position:
               
406-766
               

               
Cow position:
               
chr13:5671442-5671805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
89, 121
               

               
Conread position:
               
408-684
               

               
Cow position:
               
chr13:15110468-15110186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
37, 257
               

               
Conread position:
               
409-637
               

               
Cow position:
               
chr13:15903163-15902939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
36, 81
               

               
Conread position:
               
409-690
               

               
Cow position:
               
chr13:18696989-18696695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
36, 47
               

               
Conread position:
               
409-743
               

               
Cow position:
               
chr13:54388874-54389214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
70, 34
               

               
Conread position:
               
409-763
               

               
Cow position:
               
chr13:17568952-17569313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
36, 121
               

               
Conread position:
               
409-763
               

               
Cow position:
               
chr13:54583024-54582657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
36, 219
               

               
Conread position:
               
410-765
               

               
Cow position:
               
chr13:8374626-8374980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 211
               

               
Conread position:
               
411-749
               

               
Cow position:
               
chr13:20360415-20360073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
34, 84
               

               
Conread position:
               
415-658
               

               
Cow position:
               
chr13:11381581-11381829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
415-663
               

               
Cow position:
               
chr13:17966068-17966321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
30, 133
               

               
Conread position:
               
415-763
               

               
Cow position:
               
chr13:18058108-18058464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 17
               

               
Conread position:
               
417-662
               

               
Cow position:
               
chr13:51115889-51116134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
29, 65
               

               
Conread position:
               
418-647
               

               
Cow position:
               
chr13:10098853-10099082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
27, 103
               

               
Conread position:
               
419-751
               

               
Cow position:
               
chr13:20288466-20288134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
26, 13
               

               
Conread position:
               
426-747
               

               
Cow position:
               
chr13:58763502-58763809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
20, 48
               

               
Conread position:
               
430-679
               

               
Cow position:
               
chr13:15144246-15144488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
13, 53
               

               
Conread position:
               
431-666
               

               
Cow position:
               
chr13:2803594-2803356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
14, 115
               

               
Conread position:
               
434-681
               

               
Cow position:
               
chr13:62518210-62518462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
11, 22
               

               
Conread position:
               
435-662
               

               
Cow position:
               
chr13:34555711-34555938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
10, 62
               

               
Conread position:
               
437-758
               

               
Cow position:
               
chr13:19279209-19278884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
43, 18
               

               
Conread position:
               
437-762
               

               
Cow position:
               
chr13:15194613-15194936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 229
               

               
Conread position:
               
437-766
               

               
Cow position:
               
chr13:14576325-14575993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
8, 83
               

               
Conread position:
               
443-693
               

               
Cow position:
               
chr13:19320647-19320393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
49, 222
               

               
Conread position:
               
444-762
               

               
Cow position:
               
chr13:21135789-21136127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
36, 297
               

               
Conread position:
               
447-688
               

               
Cow position:
               
chr13:13297782-13297535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
448-739
               

               
Cow position:
               
chr13:20155107-20154814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 110
               

               
Conread position:
               
450-674
               

               
Cow position:
               
chr13:8355302-8355087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
450-761
               

               
Cow position:
               
chr13:7265020-7265321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
56, 45
               

               
Conread position:
               
451-749
               

               
Cow position:
               
chr13:20534984-20534698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
208, 8
               

               
Conread position:
               
452-749
               

               
Cow position:
               
chr13:46329501-46329805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
40, 278
               

               
Conread position:
               
462-762
               

               
Cow position:
               
chr13:54128500-54128813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
27, 262
               

               
Conread position:
               
478-700
               

               
Cow position:
               
chr13:9981769-9981983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
60, 9
               

               
Conread position:
               
478-762
               

               
Cow position:
               
chr13:7149300-7149022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
53, 9
               

               
Conread position:
               
478-763
               

               
Cow position:
               
chr13:21170602-21170312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
104, 248
               

               
Conread position:
               
478-763
               

               
Cow position:
               
chr13:52477574-52477862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
58, 9
               

               
Conread position:
               
480-766
               

               
Cow position:
               
chr13:17089454-17089732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
482-768
               

               
Cow position:
               
chr13:20868687-20868966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
103, 26
               

               
Conread position:
               
483-662
               

               
Cow position:
               
chr13:15757188-15757012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
488-766
               

               
Cow position:
               
chr13:25504596-25504316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
176, 184
               

               
Conread position:
               
489-765
               

               
Cow position:
               
chr13:20314557-20314843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
25, 211
               

               
Conread position:
               
490-760
               

               
Cow position:
               
chr13:18197546-18197821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
47, 82
               

               
Conread position:
               
495-751
               

               
Cow position:
               
chr13:19007988-19007739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
43, 105
               

               
Conread position:
               
500-763
               

               
Cow position:
               
chr13:62008163-62007891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
33, 206
               

               
Conread position:
               
500-765
               

               
Cow position:
               
chr13:16020903-16020641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
82, 93
               

               
Conread position:
               
501-681
               

               
Cow position:
               
chr13:18181723-18181900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
37, 159
               

               
Conread position:
               
501-681
               

               
Cow position:
               
chr13:47022413-47022240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
145, 35
               

               
Conread position:
               
501-749
               

               
Cow position:
               
chr13:17611500-17611753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
37, 224
               

               
Conread position:
               
501-749
               

               
Cow position:
               
chr13:35557055-35557313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
28, 201
               

               
Conread position:
               
501-760
               

               
Cow position:
               
chr13:21171522-21171785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
93, 39
               

               
Conread position:
               
501-764
               

               
Cow position:
               
chr13:1147101-1147367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
23, 43
               

               
Conread position:
               
506-765
               

               
Cow position:
               
chr13:20217350-20217617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
33, 189
               

               
Conread position:
               
508-749
               

               
Cow position:
               
chr13:55494477-55494721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
20, 219
               

               
Conread position:
               
515-749
               

               
Cow position:
               
chr13:12673258-12673490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
138, 123
               

               
Conread position:
               
523-765
               

               
Cow position:
               
chr13:45439549-45439314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
115, 20
               

               
Conread position:
               
527-765
               

               
Cow position:
               
chr13:57985915-57986150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
149, 9
               

               
Conread position:
               
528-766
               

               
Cow position:
               
chr13:84601-84373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
529-746
               

               
Cow position:
               
chr13:15083682-15083462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
135, 62
               

               
Conread position:
               
529-749
               

               
Cow position:
               
chr13:15069980-15069770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
531-749
               

               
Cow position:
               
chr13:56535476-56535265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
35, 58
               

               
Conread position:
               
543-748
               

               
Cow position:
               
chr13:56958977-56958776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
128, 53
               

               
Conread position:
               
543-749
               

               
Cow position:
               
chr13:33974742-33974544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
543-763
               

               
Cow position:
               
chr13:37614182-37614415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
44, 9
               

               
Conread position:
               
551-763
               

               
Cow position:
               
chr13:8450331-8450117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
86, 90
               

               
Conread position:
               
566-749
               

               
Cow position:
               
chr13:33854698-33854883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
98, 163
               

               
Conread position:
               
570-759
               

               
Cow position:
               
chr13:21277485-21277669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
89, 0
               
Show alignments to all cow chromosomes.