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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8027M23.3
        

               
Conread position:
               
296-631
               

               
Cow position:
               
chr21:3498286-3498621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
149, 34
               

               
Conread position:
               
299-687
               

               
Cow position:
               
chr21:20044981-20044580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
108, 45
               

               
Conread position:
               
300-635
               

               
Cow position:
               
chr21:28512324-28512646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
105, 30
               

               
Conread position:
               
304-633
               

               
Cow position:
               
chr21:7564526-7564177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
103, 26
               

               
Conread position:
               
304-637
               

               
Cow position:
               
chr21:42348882-42348561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
103, 26
               

               
Conread position:
               
304-637
               

               
Cow position:
               
chr21:42540424-42540088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 26
               

               
Conread position:
               
304-663
               

               
Cow position:
               
chr21:36297275-36297653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 28
               

               
Conread position:
               
304-749
               

               
Cow position:
               
chr21:81866-82311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
103, 26
               

               
Conread position:
               
304-763
               

               
Cow position:
               
chr21:641380-641850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 26
               

               
Conread position:
               
306-640
               

               
Cow position:
               
chr21:10601573-10601238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 40
               

               
Conread position:
               
306-766
               

               
Cow position:
               
chr21:18289459-18289946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
37, 13
               

               
Conread position:
               
307-576
               

               
Cow position:
               
chr21:13897990-13898261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
138, 23
               

               
Conread position:
               
307-765
               

               
Cow position:
               
chr21:33997423-33996982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 23
               

               
Conread position:
               
308-463
               

               
Cow position:
               
chr21:31278579-31278735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
99, 22
               

               
Conread position:
               
308-534
               

               
Cow position:
               
chr21:24094944-24094717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
137, 22
               

               
Conread position:
               
308-536
               

               
Cow position:
               
chr21:34658834-34659069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
99, 22
               

               
Conread position:
               
308-548
               

               
Cow position:
               
chr21:393821-394064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
99, 22
               

               
Conread position:
               
308-556
               

               
Cow position:
               
chr21:40058606-40058860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
99, 23
               

               
Conread position:
               
308-573
               

               
Cow position:
               
chr21:912168-911896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
6, 23
               

               
Conread position:
               
308-578
               

               
Cow position:
               
chr21:37282109-37282377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
97, 22
               

               
Conread position:
               
308-580
               

               
Cow position:
               
chr21:12961099-12960821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
99, 22
               

               
Conread position:
               
308-580
               

               
Cow position:
               
chr21:16612429-16612702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
137, 24
               

               
Conread position:
               
308-580
               

               
Cow position:
               
chr21:47802460-47802182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
101, 22
               

               
Conread position:
               
308-585
               

               
Cow position:
               
chr21:27743538-27743831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
9, 68
               

               
Conread position:
               
308-604
               

               
Cow position:
               
chr21:3381281-3380977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
118, 27
               

               
Conread position:
               
308-615
               

               
Cow position:
               
chr21:2679352-2679669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
99, 22
               

               
Conread position:
               
308-618
               

               
Cow position:
               
chr21:13410023-13409716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
99, 22
               

               
Conread position:
               
308-624
               

               
Cow position:
               
chr21:36163163-36162838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
99, 22
               

               
Conread position:
               
308-629
               

               
Cow position:
               
chr21:32191970-32192299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
98, 22
               

               
Conread position:
               
308-633
               

               
Cow position:
               
chr21:8618074-8618394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
99, 22
               

               
Conread position:
               
308-633
               

               
Cow position:
               
chr21:19766654-19766984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
118, 22
               

               
Conread position:
               
308-633
               

               
Cow position:
               
chr21:49700236-49699910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
99, 11
               

               
Conread position:
               
308-636
               

               
Cow position:
               
chr21:16696170-16696506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
118, 22
               

               
Conread position:
               
308-640
               

               
Cow position:
               
chr21:24796238-24795891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
99, 22
               

               
Conread position:
               
308-649
               

               
Cow position:
               
chr21:725092-724738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 24
               

               
Conread position:
               
308-653
               

               
Cow position:
               
chr21:41579551-41579906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
100, 22
               

               
Conread position:
               
308-663
               

               
Cow position:
               
chr21:28734116-28733753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 153
               

               
Conread position:
               
308-676
               

               
Cow position:
               
chr21:47760577-47760937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
99, 22
               

               
Conread position:
               
308-690
               

               
Cow position:
               
chr21:3818016-3818391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
135, 22
               

               
Conread position:
               
308-747
               

               
Cow position:
               
chr21:1483289-1483724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
99, 22
               

               
Conread position:
               
308-747
               

               
Cow position:
               
chr21:18568851-18568387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
36, 22
               

               
Conread position:
               
308-749
               

               
Cow position:
               
chr21:20160484-20160930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
96, 24
               

               
Conread position:
               
308-749
               

               
Cow position:
               
chr21:24598459-24598895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 22
               

               
Conread position:
               
308-751
               

               
Cow position:
               
chr21:30231903-30231442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 13
               

               
Conread position:
               
308-759
               

               
Cow position:
               
chr21:20262534-20262085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 22
               

               
Conread position:
               
308-763
               

               
Cow position:
               
chr21:39403738-39403260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
99, 20
               

               
Conread position:
               
308-765
               

               
Cow position:
               
chr21:19196368-19195892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 22
               

               
Conread position:
               
308-765
               

               
Cow position:
               
chr21:44252026-44251570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 23
               

               
Conread position:
               
308-766
               

               
Cow position:
               
chr21:27521525-27521070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
137, 23
               

               
Conread position:
               
308-766
               

               
Cow position:
               
chr21:30849143-30848679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 64
               

               
Conread position:
               
309-473
               

               
Cow position:
               
chr21:1510874-1511036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
136, 21
               

               
Conread position:
               
309-566
               

               
Cow position:
               
chr21:23984483-23984219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
95, 21
               

               
Conread position:
               
309-571
               

               
Cow position:
               
chr21:28443580-28443305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
10, 210
               

               
Conread position:
               
309-601
               

               
Cow position:
               
chr21:3813686-3813385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
309-747
               

               
Cow position:
               
chr21:38120908-38121329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 21
               

               
Conread position:
               
309-765
               

               
Cow position:
               
chr21:13035250-13034764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
8, 191
               

               
Conread position:
               
310-504
               

               
Cow position:
               
chr21:4268673-4268878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
312-764
               

               
Cow position:
               
chr21:10005083-10004614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 146
               

               
Conread position:
               
315-537
               

               
Cow position:
               
chr21:42053461-42053231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
15, 118
               

               
Conread position:
               
316-550
               

               
Cow position:
               
chr21:20910283-20910048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
88, 15
               

               
Conread position:
               
316-662
               

               
Cow position:
               
chr21:13365146-13365501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 94
               

               
Conread position:
               
317-765
               

               
Cow position:
               
chr21:5426752-5427194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
128, 27
               

               
Conread position:
               
319-514
               

               
Cow position:
               
chr21:23683358-23683560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
11, 92
               

               
Conread position:
               
319-566
               

               
Cow position:
               
chr21:17302568-17302316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
11, 50
               

               
Conread position:
               
319-573
               

               
Cow position:
               
chr21:20925698-20925434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
11, 27
               

               
Conread position:
               
319-580
               

               
Cow position:
               
chr21:24765092-24765359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
11, 27
               

               
Conread position:
               
319-610
               

               
Cow position:
               
chr21:28881950-28882246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
11, 83
               

               
Conread position:
               
319-619
               

               
Cow position:
               
chr21:24607193-24607502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
13, 183
               

               
Conread position:
               
319-626
               

               
Cow position:
               
chr21:10727089-10727400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
11, 30
               

               
Conread position:
               
319-636
               

               
Cow position:
               
chr21:27341789-27341462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
11, 88
               

               
Conread position:
               
319-653
               

               
Cow position:
               
chr21:32237105-32237429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
11, 114
               

               
Conread position:
               
319-700
               

               
Cow position:
               
chr21:23322273-23321873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
13, 26
               

               
Conread position:
               
319-721
               

               
Cow position:
               
chr21:1058885-1059290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
11, 27
               

               
Conread position:
               
319-748
               

               
Cow position:
               
chr21:14760388-14760808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
11, 60
               

               
Conread position:
               
319-749
               

               
Cow position:
               
chr21:23606482-23606919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 88
               

               
Conread position:
               
319-749
               

               
Cow position:
               
chr21:41957366-41956949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
11, 236
               

               
Conread position:
               
319-763
               

               
Cow position:
               
chr21:37299273-37299727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 144
               

               
Conread position:
               
319-763
               

               
Cow position:
               
chr21:44826068-44825608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 11
               

               
Conread position:
               
319-764
               

               
Cow position:
               
chr21:32559546-32559103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 123
               

               
Conread position:
               
319-765
               

               
Cow position:
               
chr21:33983002-33982546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 146
               

               
Conread position:
               
319-766
               

               
Cow position:
               
chr21:17511584-17512043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
11, 71
               

               
Conread position:
               
320-459
               

               
Cow position:
               
chr21:35899617-35899763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
320-467
               

               
Cow position:
               
chr21:24714462-24714613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 36
               

               
Conread position:
               
320-470
               

               
Cow position:
               
chr21:16270541-16270695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
12, 58
               

               
Conread position:
               
320-480
               

               
Cow position:
               
chr21:35897295-35897456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
87, 8
               

               
Conread position:
               
320-599
               

               
Cow position:
               
chr21:8351495-8351215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
10, 41
               

               
Conread position:
               
320-600
               

               
Cow position:
               
chr21:39888935-39888652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
10, 82
               

               
Conread position:
               
320-602
               

               
Cow position:
               
chr21:30150460-30150164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
320-625
               

               
Cow position:
               
chr21:2367149-2367454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
10, 87
               

               
Conread position:
               
320-631
               

               
Cow position:
               
chr21:24698298-24698609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
10, 139
               

               
Conread position:
               
320-632
               

               
Cow position:
               
chr21:47067078-47066772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
12, 24
               

               
Conread position:
               
320-633
               

               
Cow position:
               
chr21:5153426-5153751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
320-633
               

               
Cow position:
               
chr21:28477434-28477759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
87, 8
               

               
Conread position:
               
320-636
               

               
Cow position:
               
chr21:4998676-4998362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
10, 25
               

               
Conread position:
               
320-637
               

               
Cow position:
               
chr21:24130890-24131203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
12, 26
               

               
Conread position:
               
320-637
               

               
Cow position:
               
chr21:44515083-44515398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 87
               

               
Conread position:
               
320-653
               

               
Cow position:
               
chr21:31576321-31576641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
10, 91
               

               
Conread position:
               
320-653
               

               
Cow position:
               
chr21:42384314-42384658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 231
               

               
Conread position:
               
320-655
               

               
Cow position:
               
chr21:30607276-30606934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 10
               

               
Conread position:
               
320-663
               

               
Cow position:
               
chr21:45850901-45850547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
13, 26
               

               
Conread position:
               
320-676
               

               
Cow position:
               
chr21:15976455-15976801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
125, 8
               

               
Conread position:
               
320-676
               

               
Cow position:
               
chr21:33350551-33350910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 179
               

               
Conread position:
               
320-692
               

               
Cow position:
               
chr21:27569349-27568988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
10, 25
               

               
Conread position:
               
320-693
               

               
Cow position:
               
chr21:29484793-29485176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 26
               

               
Conread position:
               
320-716
               

               
Cow position:
               
chr21:8549490-8549903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
87, 8
               

               
Conread position:
               
320-740
               

               
Cow position:
               
chr21:31253344-31253776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
10, 236
               

               
Conread position:
               
320-749
               

               
Cow position:
               
chr21:3585547-3585112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 25
               

               
Conread position:
               
320-749
               

               
Cow position:
               
chr21:3763928-3763499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
14, 109
               

               
Conread position:
               
320-759
               

               
Cow position:
               
chr21:41620928-41621390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
13, 236
               

               
Conread position:
               
320-763
               

               
Cow position:
               
chr21:643146-643590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 8
               

               
Conread position:
               
320-763
               

               
Cow position:
               
chr21:9416051-9416516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 443
               

               
Conread position:
               
320-763
               

               
Cow position:
               
chr21:11740323-11739854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 188
               

               
Conread position:
               
320-763
               

               
Cow position:
               
chr21:23586685-23587139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 332
               

               
Conread position:
               
320-765
               

               
Cow position:
               
chr21:6051315-6051773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 226
               

               
Conread position:
               
320-765
               

               
Cow position:
               
chr21:27229986-27229534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 297
               

               
Conread position:
               
321-519
               

               
Cow position:
               
chr21:33419905-33419706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
9, 61
               

               
Conread position:
               
321-636
               

               
Cow position:
               
chr21:395686-396000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
9, 25
               

               
Conread position:
               
321-653
               

               
Cow position:
               
chr21:34565403-34565065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
11, 273
               

               
Conread position:
               
321-763
               

               
Cow position:
               
chr21:34653894-34654337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
321-765
               

               
Cow position:
               
chr21:7672943-7673382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 25
               

               
Conread position:
               
323-585
               

               
Cow position:
               
chr21:5137677-5137405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
11, 196
               

               
Conread position:
               
324-513
               

               
Cow position:
               
chr21:13303634-13303830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
121, 179
               

               
Conread position:
               
324-633
               

               
Cow position:
               
chr21:18781655-18781971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
83, 219
               

               
Conread position:
               
324-647
               

               
Cow position:
               
chr21:31662275-31662611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
83, 192
               

               
Conread position:
               
324-657
               

               
Cow position:
               
chr21:16187984-16187653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 20
               

               
Conread position:
               
324-711
               

               
Cow position:
               
chr21:21169683-21169278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
26, 220
               

               
Conread position:
               
324-763
               

               
Cow position:
               
chr21:40589668-40589214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 138
               

               
Conread position:
               
328-466
               

               
Cow position:
               
chr21:17282522-17282665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
328-486
               

               
Cow position:
               
chr21:38692010-38692166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
79, 15
               

               
Conread position:
               
328-527
               

               
Cow position:
               
chr21:4080173-4080384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
79, 24
               

               
Conread position:
               
328-571
               

               
Cow position:
               
chr21:18494785-18495040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
67, 19
               

               
Conread position:
               
328-573
               

               
Cow position:
               
chr21:21480360-21480114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
79, 19
               

               
Conread position:
               
328-608
               

               
Cow position:
               
chr21:32535795-32536082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
79, 117
               

               
Conread position:
               
328-632
               

               
Cow position:
               
chr21:17616506-17616186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
77, 108
               

               
Conread position:
               
328-636
               

               
Cow position:
               
chr21:41597634-41597944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
76, 211
               

               
Conread position:
               
328-636
               

               
Cow position:
               
chr21:42414283-42413964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
79, 16
               

               
Conread position:
               
328-674
               

               
Cow position:
               
chr21:45473939-45473590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
16, 207
               

               
Conread position:
               
328-676
               

               
Cow position:
               
chr21:36795421-36795772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
12, 95
               

               
Conread position:
               
328-688
               

               
Cow position:
               
chr21:47764293-47763937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
117, 23
               

               
Conread position:
               
328-740
               

               
Cow position:
               
chr21:42135805-42135376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 226
               

               
Conread position:
               
328-749
               

               
Cow position:
               
chr21:10263862-10264287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 19
               

               
Conread position:
               
328-749
               

               
Cow position:
               
chr21:34010571-34010144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
117, 16
               

               
Conread position:
               
328-749
               

               
Cow position:
               
chr21:47465302-47464867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 68
               

               
Conread position:
               
328-758
               

               
Cow position:
               
chr21:29069510-29069061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 163
               

               
Conread position:
               
328-762
               

               
Cow position:
               
chr21:4399618-4400058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
117, 215
               

               
Conread position:
               
328-762
               

               
Cow position:
               
chr21:14452049-14452498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
41, 16
               

               
Conread position:
               
328-766
               

               
Cow position:
               
chr21:19083781-19083316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
78, 8
               

               
Conread position:
               
329-417
               

               
Cow position:
               
chr21:22464878-22464968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
91
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
329-453
               

               
Cow position:
               
chr21:20549089-20548964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
78, 18
               

               
Conread position:
               
329-470
               

               
Cow position:
               
chr21:13256624-13256769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
329-470
               

               
Cow position:
               
chr21:28907824-28907683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
78, 48
               

               
Conread position:
               
329-471
               

               
Cow position:
               
chr21:28029217-28029366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
329-513
               

               
Cow position:
               
chr21:13585238-13585064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
116, 18
               

               
Conread position:
               
329-527
               

               
Cow position:
               
chr21:7716971-7716760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
78, 191
               

               
Conread position:
               
329-528
               

               
Cow position:
               
chr21:28027623-28027833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
78, 207
               

               
Conread position:
               
329-530
               

               
Cow position:
               
chr21:48484621-48484419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
116, 14
               

               
Conread position:
               
329-553
               

               
Cow position:
               
chr21:45375436-45375677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
68, 15
               

               
Conread position:
               
329-555
               

               
Cow position:
               
chr21:12616959-12617191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
78, 87
               

               
Conread position:
               
329-565
               

               
Cow position:
               
chr21:9710884-9710644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
19, 97
               

               
Conread position:
               
329-568
               

               
Cow position:
               
chr21:44108827-44109068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
115, 76
               

               
Conread position:
               
329-576
               

               
Cow position:
               
chr21:42145736-42145992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
12, 158
               

               
Conread position:
               
329-579
               

               
Cow position:
               
chr21:37361650-37361388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
15, 78
               

               
Conread position:
               
329-580
               

               
Cow position:
               
chr21:9862805-9862565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
202, 76
               

               
Conread position:
               
329-580
               

               
Cow position:
               
chr21:35569564-35569307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
48, 14
               

               
Conread position:
               
329-581
               

               
Cow position:
               
chr21:31676318-31676577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
74, 61
               

               
Conread position:
               
329-585
               

               
Cow position:
               
chr21:2785957-2785694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
78, 26
               

               
Conread position:
               
329-597
               

               
Cow position:
               
chr21:28993806-28993522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
329-604
               

               
Cow position:
               
chr21:21223110-21223383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
78, 13
               

               
Conread position:
               
329-607
               

               
Cow position:
               
chr21:17174960-17175250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
11, 202
               

               
Conread position:
               
329-611
               

               
Cow position:
               
chr21:4795042-4795334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
15, 134
               

               
Conread position:
               
329-620
               

               
Cow position:
               
chr21:23192698-23192392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
329-620
               

               
Cow position:
               
chr21:24222718-24222420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
47, 67
               

               
Conread position:
               
329-622
               

               
Cow position:
               
chr21:10118373-10118678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
78, 208
               

               
Conread position:
               
329-622
               

               
Cow position:
               
chr21:23150199-23149902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 15
               

               
Conread position:
               
329-625
               

               
Cow position:
               
chr21:18845195-18844890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
76, 41
               

               
Conread position:
               
329-628
               

               
Cow position:
               
chr21:5636901-5636595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
74, 207
               

               
Conread position:
               
329-630
               

               
Cow position:
               
chr21:47730199-47729894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
116, 78
               

               
Conread position:
               
329-631
               

               
Cow position:
               
chr21:4098695-4098997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
116, 76
               

               
Conread position:
               
329-633
               

               
Cow position:
               
chr21:33729253-33729560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
15, 90
               

               
Conread position:
               
329-633
               

               
Cow position:
               
chr21:39664569-39664268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
78, 149
               

               
Conread position:
               
329-633
               

               
Cow position:
               
chr21:40786490-40786807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
78, 234
               

               
Conread position:
               
329-636
               

               
Cow position:
               
chr21:2420324-2420632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
116, 95
               

               
Conread position:
               
329-636
               

               
Cow position:
               
chr21:10151615-10151938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
78, 15
               

               
Conread position:
               
329-636
               

               
Cow position:
               
chr21:11114531-11114840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
115, 218
               

               
Conread position:
               
329-637
               

               
Cow position:
               
chr21:13489462-13489781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
78, 213
               

               
Conread position:
               
329-637
               

               
Cow position:
               
chr21:28442564-28442866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
78, 144
               

               
Conread position:
               
329-642
               

               
Cow position:
               
chr21:5566809-5567125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
35, 119
               

               
Conread position:
               
329-647
               

               
Cow position:
               
chr21:45355656-45355977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
78, 191
               

               
Conread position:
               
329-652
               

               
Cow position:
               
chr21:34391150-34390826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 22
               

               
Conread position:
               
329-653
               

               
Cow position:
               
chr21:18842418-18842087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 143
               

               
Conread position:
               
329-653
               

               
Cow position:
               
chr21:28955342-28955651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
144, 69
               

               
Conread position:
               
329-653
               

               
Cow position:
               
chr21:30897239-30897564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
78, 15
               

               
Conread position:
               
329-653
               

               
Cow position:
               
chr21:33727641-33727309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
101, 78
               

               
Conread position:
               
329-659
               

               
Cow position:
               
chr21:18850399-18850068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
137, 78
               

               
Conread position:
               
329-660
               

               
Cow position:
               
chr21:47215361-47215038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
78, 61
               

               
Conread position:
               
329-662
               

               
Cow position:
               
chr21:30990448-30990128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 15
               

               
Conread position:
               
329-662
               

               
Cow position:
               
chr21:33263668-33264003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 63
               

               
Conread position:
               
329-663
               

               
Cow position:
               
chr21:33210018-33210348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
78, 208
               

               
Conread position:
               
329-676
               

               
Cow position:
               
chr21:25382829-25383195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
71, 48
               

               
Conread position:
               
329-676
               

               
Cow position:
               
chr21:28923946-28924278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
78, 32
               

               
Conread position:
               
329-676
               

               
Cow position:
               
chr21:41974559-41974209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
78, 256
               

               
Conread position:
               
329-676
               

               
Cow position:
               
chr21:42841771-42841428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
116, 13
               

               
Conread position:
               
329-678
               

               
Cow position:
               
chr21:28626061-28626408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 37
               

               
Conread position:
               
329-679
               

               
Cow position:
               
chr21:33791548-33791210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
81, 206
               

               
Conread position:
               
329-679
               

               
Cow position:
               
chr21:46263996-46264342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 37
               

               
Conread position:
               
329-689
               

               
Cow position:
               
chr21:10514627-10514995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
99, 38
               

               
Conread position:
               
329-690
               

               
Cow position:
               
chr21:33541-33914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
78, 103
               

               
Conread position:
               
329-693
               

               
Cow position:
               
chr21:1591371-1591745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
68, 14
               

               
Conread position:
               
329-693
               

               
Cow position:
               
chr21:5392722-5392339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 15
               

               
Conread position:
               
329-705
               

               
Cow position:
               
chr21:13128271-13127887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
78, 14
               

               
Conread position:
               
329-713
               

               
Cow position:
               
chr21:9990334-9990728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 41
               

               
Conread position:
               
329-721
               

               
Cow position:
               
chr21:19258646-19259041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 159
               

               
Conread position:
               
329-728
               

               
Cow position:
               
chr21:22856036-22856453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
78, 14
               

               
Conread position:
               
329-746
               

               
Cow position:
               
chr21:3361194-3360767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
78, 15
               

               
Conread position:
               
329-746
               

               
Cow position:
               
chr21:7709985-7710410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
76, 99
               

               
Conread position:
               
329-747
               

               
Cow position:
               
chr21:34739669-34740076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
75, 13
               

               
Conread position:
               
329-747
               

               
Cow position:
               
chr21:40899156-40899591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
78, 155
               

               
Conread position:
               
329-749
               

               
Cow position:
               
chr21:4276774-4276370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
12, 148
               

               
Conread position:
               
329-749
               

               
Cow position:
               
chr21:15445259-15444830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
78, 239
               

               
Conread position:
               
329-749
               

               
Cow position:
               
chr21:23672564-23672997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
69, 15
               

               
Conread position:
               
329-749
               

               
Cow position:
               
chr21:27863699-27863267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
78, 15
               

               
Conread position:
               
329-749
               

               
Cow position:
               
chr21:29002342-29001894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 420
               

               
Conread position:
               
329-749
               

               
Cow position:
               
chr21:37706587-37706160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
116, 73
               

               
Conread position:
               
329-749
               

               
Cow position:
               
chr21:38900593-38901015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 196
               

               
Conread position:
               
329-749
               

               
Cow position:
               
chr21:46849303-46848881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 102
               

               
Conread position:
               
329-750
               

               
Cow position:
               
chr21:22860822-22861245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 15
               

               
Conread position:
               
329-751
               

               
Cow position:
               
chr21:46912364-46912803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
115, 24
               

               
Conread position:
               
329-758
               

               
Cow position:
               
chr21:24858131-24858577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 225
               

               
Conread position:
               
329-760
               

               
Cow position:
               
chr21:22718961-22718520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 168
               

               
Conread position:
               
329-762
               

               
Cow position:
               
chr21:5238215-5238653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
78, 99
               

               
Conread position:
               
329-763
               

               
Cow position:
               
chr21:25764455-25764883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 15
               

               
Conread position:
               
329-763
               

               
Cow position:
               
chr21:37479776-37480230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 167
               

               
Conread position:
               
329-763
               

               
Cow position:
               
chr21:41155681-41156139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
79, 25
               

               
Conread position:
               
329-763
               

               
Cow position:
               
chr21:44565882-44565462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
21, 65
               

               
Conread position:
               
329-764
               

               
Cow position:
               
chr21:802474-802055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 151
               

               
Conread position:
               
329-764
               

               
Cow position:
               
chr21:4282048-4281614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
116, 80
               

               
Conread position:
               
329-764
               

               
Cow position:
               
chr21:17183741-17184185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
15, 36
               

               
Conread position:
               
329-765
               

               
Cow position:
               
chr21:5898579-5898141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
11, 99
               

               
Conread position:
               
329-765
               

               
Cow position:
               
chr21:13048377-13047919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
78, 142
               

               
Conread position:
               
329-765
               

               
Cow position:
               
chr21:38449632-38449184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
74, 106
               

               
Conread position:
               
329-765
               

               
Cow position:
               
chr21:42500852-42501320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
78, 111
               

               
Conread position:
               
329-766
               

               
Cow position:
               
chr21:6833872-6834319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 79
               

               
Conread position:
               
329-766
               

               
Cow position:
               
chr21:15911220-15911647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 281
               

               
Conread position:
               
329-766
               

               
Cow position:
               
chr21:40133975-40134415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
26, 170
               

               
Conread position:
               
329-768
               

               
Cow position:
               
chr21:8206610-8207028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
116, 58
               

               
Conread position:
               
330-454
               

               
Cow position:
               
chr21:34738419-34738547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
330-533
               

               
Cow position:
               
chr21:7132641-7132436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
77, 14
               

               
Conread position:
               
330-533
               

               
Cow position:
               
chr21:29979935-29979728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
88, 75
               

               
Conread position:
               
330-580
               

               
Cow position:
               
chr21:23500000-23499747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
77, 15
               

               
Conread position:
               
330-594
               

               
Cow position:
               
chr21:42913925-42913649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
75, 130
               

               
Conread position:
               
330-653
               

               
Cow position:
               
chr21:41878297-41878619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
115, 50
               

               
Conread position:
               
330-665
               

               
Cow position:
               
chr21:34159779-34160116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
14, 169
               

               
Conread position:
               
330-672
               

               
Cow position:
               
chr21:24887830-24888167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
77, 14
               

               
Conread position:
               
330-760
               

               
Cow position:
               
chr21:11645148-11644703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 98
               

               
Conread position:
               
330-764
               

               
Cow position:
               
chr21:27124307-27123855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
8, 151
               

               
Conread position:
               
331-564
               

               
Cow position:
               
chr21:1464050-1464291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
76, 221
               

               
Conread position:
               
331-576
               

               
Cow position:
               
chr21:8985371-8985625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
74, 100
               

               
Conread position:
               
331-578
               

               
Cow position:
               
chr21:20426355-20426605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
76, 13
               

               
Conread position:
               
331-629
               

               
Cow position:
               
chr21:25536819-25537124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
76, 6
               

               
Conread position:
               
331-633
               

               
Cow position:
               
chr21:13488341-13488657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 100
               

               
Conread position:
               
331-633
               

               
Cow position:
               
chr21:25344700-25344991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
114, 13
               

               
Conread position:
               
331-636
               

               
Cow position:
               
chr21:28429271-28429577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
76, 119
               

               
Conread position:
               
331-662
               

               
Cow position:
               
chr21:12801922-12801588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 12
               

               
Conread position:
               
331-700
               

               
Cow position:
               
chr21:7582087-7581712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
76, 11
               

               
Conread position:
               
331-762
               

               
Cow position:
               
chr21:27146172-27145720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
7, 206
               

               
Conread position:
               
332-488
               

               
Cow position:
               
chr21:28599594-28599759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
332-571
               

               
Cow position:
               
chr21:49662294-49662053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
73, 53
               

               
Conread position:
               
332-653
               

               
Cow position:
               
chr21:23801298-23800978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
113, 12
               

               
Conread position:
               
332-658
               

               
Cow position:
               
chr21:45330785-45330452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
75, 220
               

               
Conread position:
               
332-667
               

               
Cow position:
               
chr21:19363641-19363296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 318
               

               
Conread position:
               
332-676
               

               
Cow position:
               
chr21:33562838-33563172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
75, 37
               

               
Conread position:
               
332-686
               

               
Cow position:
               
chr21:35897803-35897446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
113, 73
               

               
Conread position:
               
332-688
               

               
Cow position:
               
chr21:18790733-18790375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
113, 73
               

               
Conread position:
               
332-692
               

               
Cow position:
               
chr21:37345279-37344916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
75, 217
               

               
Conread position:
               
333-749
               

               
Cow position:
               
chr21:30592479-30592062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 11
               

               
Conread position:
               
334-580
               

               
Cow position:
               
chr21:21077155-21077403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
72, 46
               

               
Conread position:
               
334-600
               

               
Cow position:
               
chr21:6102444-6102164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 219
               

               
Conread position:
               
334-614
               

               
Cow position:
               
chr21:19937108-19936809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
73, 104
               

               
Conread position:
               
334-633
               

               
Cow position:
               
chr21:41198586-41198269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
334-676
               

               
Cow position:
               
chr21:28190853-28191201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 141
               

               
Conread position:
               
334-676
               

               
Cow position:
               
chr21:44671578-44671913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
73, 146
               

               
Conread position:
               
334-721
               

               
Cow position:
               
chr21:31691304-31691698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 17
               

               
Conread position:
               
334-749
               

               
Cow position:
               
chr21:17193935-17193496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
71, 359
               

               
Conread position:
               
334-749
               

               
Cow position:
               
chr21:22194286-22193842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
111, 71
               

               
Conread position:
               
334-765
               

               
Cow position:
               
chr21:32339912-32339476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
70, 222
               

               
Conread position:
               
335-580
               

               
Cow position:
               
chr21:28989438-28989687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
72, 166
               

               
Conread position:
               
335-631
               

               
Cow position:
               
chr21:32454727-32455032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
58, 157
               

               
Conread position:
               
335-653
               

               
Cow position:
               
chr21:13754628-13754936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
110, 39
               

               
Conread position:
               
335-757
               

               
Cow position:
               
chr21:28810437-28810015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
58, 35
               

               
Conread position:
               
335-759
               

               
Cow position:
               
chr21:23535542-23535975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
74, 59
               

               
Conread position:
               
336-600
               

               
Cow position:
               
chr21:9872794-9873056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
154, 53
               

               
Conread position:
               
337-546
               

               
Cow position:
               
chr21:48108035-48107820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
70, 171
               

               
Conread position:
               
337-611
               

               
Cow position:
               
chr21:2904632-2904370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
108, 63
               

               
Conread position:
               
337-765
               

               
Cow position:
               
chr21:47861022-47861449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
70, 196
               

               
Conread position:
               
338-633
               

               
Cow position:
               
chr21:10007812-10007509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
68, 155
               

               
Conread position:
               
338-749
               

               
Cow position:
               
chr21:29214320-29213907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 81
               

               
Conread position:
               
339-535
               

               
Cow position:
               
chr21:48251200-48250994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
68, 123
               

               
Conread position:
               
341-653
               

               
Cow position:
               
chr21:15610983-15611290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
82, 64
               

               
Conread position:
               
341-693
               

               
Cow position:
               
chr21:27624544-27624895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
70, 29
               

               
Conread position:
               
343-636
               

               
Cow position:
               
chr21:9028454-9028749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
64, 166
               

               
Conread position:
               
343-636
               

               
Cow position:
               
chr21:10000914-10001208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
64, 41
               

               
Conread position:
               
343-766
               

               
Cow position:
               
chr21:28211030-28211446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
64, 189
               

               
Conread position:
               
344-566
               

               
Cow position:
               
chr21:42190334-42190108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
101, 60
               

               
Conread position:
               
344-636
               

               
Cow position:
               
chr21:15584575-15584286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
101, 29
               

               
Conread position:
               
344-637
               

               
Cow position:
               
chr21:8125966-8125671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
11, 47
               

               
Conread position:
               
347-676
               

               
Cow position:
               
chr21:26244768-26245083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
7, 56
               

               
Conread position:
               
347-692
               

               
Cow position:
               
chr21:39401432-39401779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
60, 192
               

               
Conread position:
               
347-764
               

               
Cow position:
               
chr21:937878-938289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
98, 11
               

               
Conread position:
               
348-580
               

               
Cow position:
               
chr21:36793731-36793972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
59, 112
               

               
Conread position:
               
348-691
               

               
Cow position:
               
chr21:712773-713139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
97, 57
               

               
Conread position:
               
349-662
               

               
Cow position:
               
chr21:32297671-32297360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
58, 193
               

               
Conread position:
               
349-749
               

               
Cow position:
               
chr21:28244315-28244719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
96, 56
               

               
Conread position:
               
350-763
               

               
Cow position:
               
chr21:41590716-41590299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 78
               

               
Conread position:
               
351-765
               

               
Cow position:
               
chr21:13840164-13840599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
56, 39
               

               
Conread position:
               
352-700
               

               
Cow position:
               
chr21:18800686-18800331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
55, 147
               

               
Conread position:
               
353-488
               

               
Cow position:
               
chr21:14125889-14126030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
54, 79
               

               
Conread position:
               
353-580
               

               
Cow position:
               
chr21:5455144-5454914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
48, 53
               

               
Conread position:
               
353-676
               

               
Cow position:
               
chr21:45921215-45920890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
54, 196
               

               
Conread position:
               
354-690
               

               
Cow position:
               
chr21:10633796-10633446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
53, 265
               

               
Conread position:
               
355-691
               

               
Cow position:
               
chr21:24642364-24642706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
17, 261
               

               
Conread position:
               
360-765
               

               
Cow position:
               
chr21:6713674-6713256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
11, 34
               

               
Conread position:
               
362-759
               

               
Cow position:
               
chr21:30222196-30222604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
45, 12
               

               
Conread position:
               
363-725
               

               
Cow position:
               
chr21:18041989-18041649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
82, 41
               

               
Conread position:
               
365-662
               

               
Cow position:
               
chr21:35354393-35354692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
42, 24
               

               
Conread position:
               
366-758
               

               
Cow position:
               
chr21:42007603-42007207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
81, 41
               

               
Conread position:
               
368-721
               

               
Cow position:
               
chr21:29978903-29978539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
39, 6
               

               
Conread position:
               
368-749
               

               
Cow position:
               
chr21:46895-47299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
15, 376
               

               
Conread position:
               
368-764
               

               
Cow position:
               
chr21:12301645-12301263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
35, 75
               

               
Conread position:
               
369-759
               

               
Cow position:
               
chr21:48234299-48233914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
48, 106
               

               
Conread position:
               
371-692
               

               
Cow position:
               
chr21:11359899-11360223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
29, 69
               

               
Conread position:
               
371-765
               

               
Cow position:
               
chr21:12462109-12461696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 336
               

               
Conread position:
               
372-613
               

               
Cow position:
               
chr21:44733299-44733063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
35, 79
               

               
Conread position:
               
372-759
               

               
Cow position:
               
chr21:20152810-20153219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
35, 371
               

               
Conread position:
               
373-662
               

               
Cow position:
               
chr21:12723020-12723310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
34, 150
               

               
Conread position:
               
378-629
               

               
Cow position:
               
chr21:17856412-17856670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
29, 84
               

               
Conread position:
               
380-652
               

               
Cow position:
               
chr21:20260450-20260170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
36, 25
               

               
Conread position:
               
381-637
               

               
Cow position:
               
chr21:20192774-20193028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
64, 24
               

               
Conread position:
               
386-633
               

               
Cow position:
               
chr21:46552224-46551973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
7, 32
               

               
Conread position:
               
392-740
               

               
Cow position:
               
chr21:10561697-10561342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
53, 13
               

               
Conread position:
               
397-633
               

               
Cow position:
               
chr21:17008873-17009111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
49, 22
               

               
Conread position:
               
399-693
               

               
Cow position:
               
chr21:29014657-29014372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
11, 25
               

               
Conread position:
               
406-634
               

               
Cow position:
               
chr21:18414949-18415183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
39, 196
               

               
Conread position:
               
406-749
               

               
Cow position:
               
chr21:12916531-12916166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 149
               

               
Conread position:
               
406-763
               

               
Cow position:
               
chr21:10673030-10673376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
70, 39
               

               
Conread position:
               
408-668
               

               
Cow position:
               
chr21:20418784-20418517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
409-659
               

               
Cow position:
               
chr21:45262910-45262654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
409-688
               

               
Cow position:
               
chr21:30250288-30250015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
36, 73
               

               
Conread position:
               
409-763
               

               
Cow position:
               
chr21:16914677-16915048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
36, 109
               

               
Conread position:
               
410-632
               

               
Cow position:
               
chr21:36789700-36789924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
39, 48
               

               
Conread position:
               
411-749
               

               
Cow position:
               
chr21:30835266-30835618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
34, 182
               

               
Conread position:
               
415-662
               

               
Cow position:
               
chr21:35437557-35437330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
30, 65
               

               
Conread position:
               
415-716
               

               
Cow position:
               
chr21:22465105-22465398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
30, 97
               

               
Conread position:
               
415-762
               

               
Cow position:
               
chr21:45906713-45906356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
30, 131
               

               
Conread position:
               
418-749
               

               
Cow position:
               
chr21:22210333-22209991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
27, 118
               

               
Conread position:
               
423-688
               

               
Cow position:
               
chr21:4280756-4280488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
24, 126
               

               
Conread position:
               
428-720
               

               
Cow position:
               
chr21:16569822-16570119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
17, 121
               

               
Conread position:
               
431-768
               

               
Cow position:
               
chr21:44214048-44214382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 180
               

               
Conread position:
               
433-761
               

               
Cow position:
               
chr21:47719373-47719040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
12, 48
               

               
Conread position:
               
435-759
               

               
Cow position:
               
chr21:1511219-1511548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
10, 173
               

               
Conread position:
               
435-765
               

               
Cow position:
               
chr21:40266049-40266395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
10, 154
               

               
Conread position:
               
442-759
               

               
Cow position:
               
chr21:8426377-8426705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
39, 119
               

               
Conread position:
               
445-758
               

               
Cow position:
               
chr21:8349267-8349583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
29, 166
               

               
Conread position:
               
447-768
               

               
Cow position:
               
chr21:18060016-18059688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
7, 72
               

               
Conread position:
               
448-759
               

               
Cow position:
               
chr21:13656687-13656372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
192, 43
               

               
Conread position:
               
450-740
               

               
Cow position:
               
chr21:829258-828967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
89, 30
               

               
Conread position:
               
452-759
               

               
Cow position:
               
chr21:17890249-17890565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
40, 101
               

               
Conread position:
               
452-759
               

               
Cow position:
               
chr21:47714057-47713745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
33, 88
               

               
Conread position:
               
456-728
               

               
Cow position:
               
chr21:41522457-41522177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
37, 99
               

               
Conread position:
               
461-761
               

               
Cow position:
               
chr21:22014142-22014456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
34, 57
               

               
Conread position:
               
464-749
               

               
Cow position:
               
chr21:46599320-46599610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
37, 190
               

               
Conread position:
               
469-759
               

               
Cow position:
               
chr21:674655-674930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
478-764
               

               
Cow position:
               
chr21:868948-868651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
60, 9
               

               
Conread position:
               
479-765
               

               
Cow position:
               
chr21:10657124-10656831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
7, 17
               

               
Conread position:
               
483-760
               

               
Cow position:
               
chr21:28030269-28030542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
181, 121
               

               
Conread position:
               
483-762
               

               
Cow position:
               
chr21:42209650-42209380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
41, 155
               

               
Conread position:
               
484-634
               

               
Cow position:
               
chr21:47160199-47160349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
54, 30
               

               
Conread position:
               
491-760
               

               
Cow position:
               
chr21:14126276-14126535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
192, 43
               

               
Conread position:
               
500-748
               

               
Cow position:
               
chr21:19240879-19240627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
30, 229
               

               
Conread position:
               
501-658
               

               
Cow position:
               
chr21:30980579-30980423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
501-662
               

               
Cow position:
               
chr21:20183070-20183230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
501-749
               

               
Cow position:
               
chr21:13588761-13589014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
501-749
               

               
Cow position:
               
chr21:21615773-21616028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
32, 184
               

               
Conread position:
               
501-762
               

               
Cow position:
               
chr21:71584-71852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
32, 144
               

               
Conread position:
               
506-748
               

               
Cow position:
               
chr21:41287791-41287545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
33, 219
               

               
Conread position:
               
506-763
               

               
Cow position:
               
chr21:12104368-12104620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
96, 150
               

               
Conread position:
               
513-749
               

               
Cow position:
               
chr21:19868946-19868710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
21, 43
               

               
Conread position:
               
513-763
               

               
Cow position:
               
chr21:36682332-36682593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
12, 200
               

               
Conread position:
               
529-743
               

               
Cow position:
               
chr21:20163734-20163953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
8, 15
               

               
Conread position:
               
531-763
               

               
Cow position:
               
chr21:17252950-17252712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
133, 65
               

               
Conread position:
               
531-765
               

               
Cow position:
               
chr21:19702758-19702998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
10, 171
               

               
Conread position:
               
533-764
               

               
Cow position:
               
chr21:16498550-16498783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
127, 8
               

               
Conread position:
               
539-763
               

               
Cow position:
               
chr21:39393784-39394018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
114, 157
               

               
Conread position:
               
542-747
               

               
Cow position:
               
chr21:24875391-24875602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
58, 185
               

               
Conread position:
               
551-765
               

               
Cow position:
               
chr21:8506496-8506279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
113, 10
               

               
Conread position:
               
551-765
               

               
Cow position:
               
chr21:8509384-8509167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
113, 10
               

               
Conread position:
               
555-759
               

               
Cow position:
               
chr21:40820801-40820588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
102, 174
               

               
Conread position:
               
558-759
               

               
Cow position:
               
chr21:11182608-11182811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
101, 160
               

               
Conread position:
               
558-763
               

               
Cow position:
               
chr21:15012494-15012698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
106, 164
               

               
Conread position:
               
558-765
               

               
Cow position:
               
chr21:25012137-25012347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
91, 165
               
Show alignments to all cow chromosomes.