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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8027M23.3
        

               
Conread position:
               
299-676
               

               
Cow position:
               
chr29:17607142-17607519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 31
               

               
Conread position:
               
300-584
               

               
Cow position:
               
chr29:16175544-16175258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
107, 28
               

               
Conread position:
               
301-749
               

               
Cow position:
               
chr29:39111580-39111137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 24
               

               
Conread position:
               
303-453
               

               
Cow position:
               
chr29:21265461-21265616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 44
               

               
Conread position:
               
304-487
               

               
Cow position:
               
chr29:40902988-40902804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
103, 27
               

               
Conread position:
               
304-749
               

               
Cow position:
               
chr29:28197277-28196833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 26
               

               
Conread position:
               
306-676
               

               
Cow position:
               
chr29:19338708-19339104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
9, 164
               

               
Conread position:
               
308-464
               

               
Cow position:
               
chr29:45588738-45588580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
113, 22
               

               
Conread position:
               
308-488
               

               
Cow position:
               
chr29:32308589-32308405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 25
               

               
Conread position:
               
308-533
               

               
Cow position:
               
chr29:26130518-26130749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
99, 22
               

               
Conread position:
               
308-550
               

               
Cow position:
               
chr29:3395845-3396089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
137, 22
               

               
Conread position:
               
308-564
               

               
Cow position:
               
chr29:28689345-28689609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
99, 22
               

               
Conread position:
               
308-566
               

               
Cow position:
               
chr29:24033531-24033796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
81, 22
               

               
Conread position:
               
308-567
               

               
Cow position:
               
chr29:35281238-35281496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
137, 22
               

               
Conread position:
               
308-580
               

               
Cow position:
               
chr29:20178390-20178123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
30, 22
               

               
Conread position:
               
308-583
               

               
Cow position:
               
chr29:4328169-4328432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
137, 22
               

               
Conread position:
               
308-625
               

               
Cow position:
               
chr29:22957599-22957289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
99, 36
               

               
Conread position:
               
308-631
               

               
Cow position:
               
chr29:29974776-29975100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
99, 22
               

               
Conread position:
               
308-633
               

               
Cow position:
               
chr29:20674071-20673746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
308-633
               

               
Cow position:
               
chr29:28883815-28884145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
97, 23
               

               
Conread position:
               
308-636
               

               
Cow position:
               
chr29:28868366-28868710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
36, 22
               

               
Conread position:
               
308-636
               

               
Cow position:
               
chr29:35484979-35485313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
100, 23
               

               
Conread position:
               
308-651
               

               
Cow position:
               
chr29:8415669-8416017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
61, 56
               

               
Conread position:
               
308-676
               

               
Cow position:
               
chr29:15940903-15940523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
75, 22
               

               
Conread position:
               
308-676
               

               
Cow position:
               
chr29:22175428-22175784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
95, 22
               

               
Conread position:
               
308-676
               

               
Cow position:
               
chr29:32290337-32290713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
97, 24
               

               
Conread position:
               
308-683
               

               
Cow position:
               
chr29:18085325-18085682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
230, 22
               

               
Conread position:
               
308-700
               

               
Cow position:
               
chr29:25333722-25333334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
9, 39
               

               
Conread position:
               
308-712
               

               
Cow position:
               
chr29:28775719-28775312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
151, 23
               

               
Conread position:
               
308-739
               

               
Cow position:
               
chr29:29056918-29057353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 66
               

               
Conread position:
               
308-740
               

               
Cow position:
               
chr29:38581704-38582148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
99, 24
               

               
Conread position:
               
308-749
               

               
Cow position:
               
chr29:14501329-14501782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
99, 23
               

               
Conread position:
               
308-749
               

               
Cow position:
               
chr29:24952421-24952874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
99, 22
               

               
Conread position:
               
308-759
               

               
Cow position:
               
chr29:28195784-28195336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 22
               

               
Conread position:
               
308-761
               

               
Cow position:
               
chr29:17109705-17110153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 23
               

               
Conread position:
               
308-763
               

               
Cow position:
               
chr29:22069012-22068538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
99, 22
               

               
Conread position:
               
308-763
               

               
Cow position:
               
chr29:35501913-35501463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 22
               

               
Conread position:
               
308-765
               

               
Cow position:
               
chr29:4120581-4121060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 22
               

               
Conread position:
               
308-765
               

               
Cow position:
               
chr29:7041104-7040665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
7, 72
               

               
Conread position:
               
308-765
               

               
Cow position:
               
chr29:23874191-23874665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
42, 25
               

               
Conread position:
               
308-765
               

               
Cow position:
               
chr29:35434605-35435064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
99, 23
               

               
Conread position:
               
308-767
               

               
Cow position:
               
chr29:6635839-6636285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
151, 23
               

               
Conread position:
               
309-649
               

               
Cow position:
               
chr29:13553861-13554216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
10, 291
               

               
Conread position:
               
309-693
               

               
Cow position:
               
chr29:750162-749785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
99, 22
               

               
Conread position:
               
309-700
               

               
Cow position:
               
chr29:27858529-27858914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
104, 9
               

               
Conread position:
               
310-759
               

               
Cow position:
               
chr29:40891965-40891510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
95, 21
               

               
Conread position:
               
310-765
               

               
Cow position:
               
chr29:3704466-3704014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
97, 20
               

               
Conread position:
               
311-605
               

               
Cow position:
               
chr29:6775248-6774961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
28, 12
               

               
Conread position:
               
313-760
               

               
Cow position:
               
chr29:40117311-40117763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 34
               

               
Conread position:
               
315-457
               

               
Cow position:
               
chr29:13040810-13040666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
89, 18
               

               
Conread position:
               
316-763
               

               
Cow position:
               
chr29:19949053-19949507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 14
               

               
Conread position:
               
319-539
               

               
Cow position:
               
chr29:41076285-41076061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
11, 163
               

               
Conread position:
               
319-633
               

               
Cow position:
               
chr29:20429230-20428900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
11, 182
               

               
Conread position:
               
319-640
               

               
Cow position:
               
chr29:40337781-40337466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 63
               

               
Conread position:
               
319-648
               

               
Cow position:
               
chr29:17362-17033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
11, 178
               

               
Conread position:
               
319-676
               

               
Cow position:
               
chr29:32799960-32799609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
11, 85
               

               
Conread position:
               
319-700
               

               
Cow position:
               
chr29:4480429-4480038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 27
               

               
Conread position:
               
319-714
               

               
Cow position:
               
chr29:1325184-1325591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
11, 27
               

               
Conread position:
               
319-739
               

               
Cow position:
               
chr29:10456809-10456403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
11, 34
               

               
Conread position:
               
319-748
               

               
Cow position:
               
chr29:29769603-29769168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 85
               

               
Conread position:
               
319-748
               

               
Cow position:
               
chr29:36586325-36586755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
88, 11
               

               
Conread position:
               
319-764
               

               
Cow position:
               
chr29:22613178-22613624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 30
               

               
Conread position:
               
319-765
               

               
Cow position:
               
chr29:2744529-2744066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 413
               

               
Conread position:
               
319-768
               

               
Cow position:
               
chr29:22162510-22162057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 64
               

               
Conread position:
               
320-531
               

               
Cow position:
               
chr29:4804977-4805196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
10, 108
               

               
Conread position:
               
320-583
               

               
Cow position:
               
chr29:94801-94543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
10, 29
               

               
Conread position:
               
320-619
               

               
Cow position:
               
chr29:41747188-41747498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
87, 8
               

               
Conread position:
               
320-620
               

               
Cow position:
               
chr29:11136144-11135845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
12, 26
               

               
Conread position:
               
320-631
               

               
Cow position:
               
chr29:26771185-26771501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
7, 26
               

               
Conread position:
               
320-633
               

               
Cow position:
               
chr29:26725909-26726233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
5, 190
               

               
Conread position:
               
320-633
               

               
Cow position:
               
chr29:27009162-27009480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
10, 170
               

               
Conread position:
               
320-634
               

               
Cow position:
               
chr29:477851-478172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
87, 8
               

               
Conread position:
               
320-662
               

               
Cow position:
               
chr29:8926715-8926368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 151
               

               
Conread position:
               
320-664
               

               
Cow position:
               
chr29:26263599-26263931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
87, 8
               

               
Conread position:
               
320-685
               

               
Cow position:
               
chr29:17409077-17409447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
54, 8
               

               
Conread position:
               
320-688
               

               
Cow position:
               
chr29:26673159-26672792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
10, 25
               

               
Conread position:
               
320-697
               

               
Cow position:
               
chr29:37961229-37960851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
87, 8
               

               
Conread position:
               
320-700
               

               
Cow position:
               
chr29:10156545-10156175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
10, 26
               

               
Conread position:
               
320-705
               

               
Cow position:
               
chr29:36216862-36217244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 33
               

               
Conread position:
               
320-749
               

               
Cow position:
               
chr29:31928723-31929173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 47
               

               
Conread position:
               
320-759
               

               
Cow position:
               
chr29:5062876-5063341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
10, 26
               

               
Conread position:
               
320-765
               

               
Cow position:
               
chr29:1933814-1933364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
10, 180
               

               
Conread position:
               
320-765
               

               
Cow position:
               
chr29:36530607-36531069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 169
               

               
Conread position:
               
320-765
               

               
Cow position:
               
chr29:37599460-37599039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
12, 26
               

               
Conread position:
               
321-639
               

               
Cow position:
               
chr29:40583542-40583856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
9, 37
               

               
Conread position:
               
321-664
               

               
Cow position:
               
chr29:18695002-18695347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
9, 152
               

               
Conread position:
               
323-765
               

               
Cow position:
               
chr29:41530599-41531054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 21
               

               
Conread position:
               
324-454
               

               
Cow position:
               
chr29:686441-686309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
83, 20
               

               
Conread position:
               
324-548
               

               
Cow position:
               
chr29:44233199-44232970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
83, 98
               

               
Conread position:
               
324-566
               

               
Cow position:
               
chr29:8125843-8125591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
83, 23
               

               
Conread position:
               
324-631
               

               
Cow position:
               
chr29:4367471-4367788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
83, 20
               

               
Conread position:
               
324-766
               

               
Cow position:
               
chr29:16657441-16657896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
83, 22
               

               
Conread position:
               
324-768
               

               
Cow position:
               
chr29:27833737-27834192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
83, 200
               

               
Conread position:
               
325-763
               

               
Cow position:
               
chr29:26615974-26615539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 326
               

               
Conread position:
               
328-453
               

               
Cow position:
               
chr29:22339460-22339331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
328-517
               

               
Cow position:
               
chr29:30028677-30028476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
75, 181
               

               
Conread position:
               
328-548
               

               
Cow position:
               
chr29:585036-585258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
79, 23
               

               
Conread position:
               
328-559
               

               
Cow position:
               
chr29:9686247-9686009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
328-568
               

               
Cow position:
               
chr29:37292531-37292778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
57, 218
               

               
Conread position:
               
328-647
               

               
Cow position:
               
chr29:2984641-2984968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
77, 15
               

               
Conread position:
               
328-654
               

               
Cow position:
               
chr29:40852690-40853013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
79, 19
               

               
Conread position:
               
329-465
               

               
Cow position:
               
chr29:36356606-36356742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
116, 109
               

               
Conread position:
               
329-470
               

               
Cow position:
               
chr29:29066181-29066325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
329-533
               

               
Cow position:
               
chr29:5919570-5919356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
78, 153
               

               
Conread position:
               
329-533
               

               
Cow position:
               
chr29:26224102-26224299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
116, 86
               

               
Conread position:
               
329-533
               

               
Cow position:
               
chr29:29312760-29312554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
115, 61
               

               
Conread position:
               
329-540
               

               
Cow position:
               
chr29:961674-961895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
78, 207
               

               
Conread position:
               
329-540
               

               
Cow position:
               
chr29:21236871-21237090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
76, 68
               

               
Conread position:
               
329-556
               

               
Cow position:
               
chr29:3502816-3503043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
92, 18
               

               
Conread position:
               
329-559
               

               
Cow position:
               
chr29:7408134-7407895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
56, 48
               

               
Conread position:
               
329-563
               

               
Cow position:
               
chr29:11684767-11685000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
144, 96
               

               
Conread position:
               
329-564
               

               
Cow position:
               
chr29:2644550-2644304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
78, 14
               

               
Conread position:
               
329-580
               

               
Cow position:
               
chr29:17543205-17543455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
78, 133
               

               
Conread position:
               
329-580
               

               
Cow position:
               
chr29:18364630-18364394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
329-580
               

               
Cow position:
               
chr29:35738515-35738261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
78, 175
               

               
Conread position:
               
329-580
               

               
Cow position:
               
chr29:44901947-44901693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
78, 38
               

               
Conread position:
               
329-583
               

               
Cow position:
               
chr29:42848982-42849239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
116, 76
               

               
Conread position:
               
329-602
               

               
Cow position:
               
chr29:1956334-1956058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
78, 151
               

               
Conread position:
               
329-603
               

               
Cow position:
               
chr29:31594360-31594093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
116, 75
               

               
Conread position:
               
329-604
               

               
Cow position:
               
chr29:12005009-12004727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
116, 13
               

               
Conread position:
               
329-620
               

               
Cow position:
               
chr29:19792525-19792225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
76, 33
               

               
Conread position:
               
329-633
               

               
Cow position:
               
chr29:87262-86947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
78, 14
               

               
Conread position:
               
329-633
               

               
Cow position:
               
chr29:15738589-15738276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
78, 33
               

               
Conread position:
               
329-633
               

               
Cow position:
               
chr29:19389241-19389542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
78, 48
               

               
Conread position:
               
329-633
               

               
Cow position:
               
chr29:21443589-21443274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
329-635
               

               
Cow position:
               
chr29:2071813-2071505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
76, 15
               

               
Conread position:
               
329-636
               

               
Cow position:
               
chr29:6293712-6293411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
116, 15
               

               
Conread position:
               
329-636
               

               
Cow position:
               
chr29:9638557-9638253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
116, 76
               

               
Conread position:
               
329-636
               

               
Cow position:
               
chr29:16195607-16195907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
116, 86
               

               
Conread position:
               
329-636
               

               
Cow position:
               
chr29:42771417-42771704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
116, 22
               

               
Conread position:
               
329-637
               

               
Cow position:
               
chr29:9139163-9139489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
78, 292
               

               
Conread position:
               
329-637
               

               
Cow position:
               
chr29:9911932-9912244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
116, 75
               

               
Conread position:
               
329-637
               

               
Cow position:
               
chr29:20903533-20903222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
78, 136
               

               
Conread position:
               
329-637
               

               
Cow position:
               
chr29:40165997-40166312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 169
               

               
Conread position:
               
329-637
               

               
Cow position:
               
chr29:41811822-41811522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
116, 15
               

               
Conread position:
               
329-648
               

               
Cow position:
               
chr29:2589133-2588812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
77, 12
               

               
Conread position:
               
329-653
               

               
Cow position:
               
chr29:356081-356405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
78, 103
               

               
Conread position:
               
329-653
               

               
Cow position:
               
chr29:707190-706872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
115, 39
               

               
Conread position:
               
329-653
               

               
Cow position:
               
chr29:39567443-39567766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
78, 22
               

               
Conread position:
               
329-662
               

               
Cow position:
               
chr29:23984209-23983862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 49
               

               
Conread position:
               
329-664
               

               
Cow position:
               
chr29:10235360-10235039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
116, 55
               

               
Conread position:
               
329-666
               

               
Cow position:
               
chr29:16359368-16359718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
57, 310
               

               
Conread position:
               
329-674
               

               
Cow position:
               
chr29:5099007-5098665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
78, 167
               

               
Conread position:
               
329-679
               

               
Cow position:
               
chr29:21196895-21196543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
78, 15
               

               
Conread position:
               
329-681
               

               
Cow position:
               
chr29:13127353-13127012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
116, 82
               

               
Conread position:
               
329-688
               

               
Cow position:
               
chr29:25088508-25088869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
78, 182
               

               
Conread position:
               
329-691
               

               
Cow position:
               
chr29:6844874-6844502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
97, 15
               

               
Conread position:
               
329-711
               

               
Cow position:
               
chr29:109465-109830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
78, 15
               

               
Conread position:
               
329-711
               

               
Cow position:
               
chr29:21933358-21932971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
78, 91
               

               
Conread position:
               
329-720
               

               
Cow position:
               
chr29:34745899-34745498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
54, 15
               

               
Conread position:
               
329-721
               

               
Cow position:
               
chr29:14112127-14112545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
65, 135
               

               
Conread position:
               
329-722
               

               
Cow position:
               
chr29:43252932-43252522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
78, 15
               

               
Conread position:
               
329-723
               

               
Cow position:
               
chr29:1556687-1557089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 207
               

               
Conread position:
               
329-728
               

               
Cow position:
               
chr29:5892602-5893015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
78, 15
               

               
Conread position:
               
329-740
               

               
Cow position:
               
chr29:18735888-18735471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
78, 103
               

               
Conread position:
               
329-740
               

               
Cow position:
               
chr29:43328392-43328810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 343
               

               
Conread position:
               
329-748
               

               
Cow position:
               
chr29:34297810-34297385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
78, 129
               

               
Conread position:
               
329-749
               

               
Cow position:
               
chr29:22895471-22895895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
23, 46
               

               
Conread position:
               
329-749
               

               
Cow position:
               
chr29:35406039-35405603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
89, 76
               

               
Conread position:
               
329-756
               

               
Cow position:
               
chr29:20933460-20933910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
78, 177
               

               
Conread position:
               
329-758
               

               
Cow position:
               
chr29:7956229-7955792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
78, 159
               

               
Conread position:
               
329-759
               

               
Cow position:
               
chr29:4875148-4874693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
66, 339
               

               
Conread position:
               
329-759
               

               
Cow position:
               
chr29:17222163-17222613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
69, 215
               

               
Conread position:
               
329-759
               

               
Cow position:
               
chr29:19756203-19756634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
99, 165
               

               
Conread position:
               
329-759
               

               
Cow position:
               
chr29:20626332-20626767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
78, 13
               

               
Conread position:
               
329-760
               

               
Cow position:
               
chr29:12784200-12783757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 209
               

               
Conread position:
               
329-762
               

               
Cow position:
               
chr29:19125115-19125531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
117, 14
               

               
Conread position:
               
329-763
               

               
Cow position:
               
chr29:12679910-12680360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 15
               

               
Conread position:
               
329-764
               

               
Cow position:
               
chr29:8669110-8669556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
77, 220
               

               
Conread position:
               
329-764
               

               
Cow position:
               
chr29:26778639-26779078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 140
               

               
Conread position:
               
329-765
               

               
Cow position:
               
chr29:25737662-25737216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 91
               

               
Conread position:
               
329-765
               

               
Cow position:
               
chr29:35291854-35292289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 71
               

               
Conread position:
               
329-766
               

               
Cow position:
               
chr29:35459016-35458562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
77, 97
               

               
Conread position:
               
330-470
               

               
Cow position:
               
chr29:17135606-17135745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
115, 82
               

               
Conread position:
               
330-546
               

               
Cow position:
               
chr29:21000397-21000620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
77, 50
               

               
Conread position:
               
330-576
               

               
Cow position:
               
chr29:26734789-26735036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
115, 132
               

               
Conread position:
               
330-633
               

               
Cow position:
               
chr29:2188581-2188292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
86, 75
               

               
Conread position:
               
330-688
               

               
Cow position:
               
chr29:11562370-11562732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 147
               

               
Conread position:
               
330-737
               

               
Cow position:
               
chr29:465646-465223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
38, 153
               

               
Conread position:
               
330-763
               

               
Cow position:
               
chr29:9709455-9709895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 14
               

               
Conread position:
               
330-763
               

               
Cow position:
               
chr29:11366003-11366415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
77, 14
               

               
Conread position:
               
330-764
               

               
Cow position:
               
chr29:18021919-18021501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
106, 72
               

               
Conread position:
               
331-617
               

               
Cow position:
               
chr29:31926533-31926241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
73, 46
               

               
Conread position:
               
331-621
               

               
Cow position:
               
chr29:17131854-17131567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
17, 101
               

               
Conread position:
               
331-628
               

               
Cow position:
               
chr29:18212225-18211939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
122, 13
               

               
Conread position:
               
331-633
               

               
Cow position:
               
chr29:3237602-3237289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
6, 106
               

               
Conread position:
               
331-635
               

               
Cow position:
               
chr29:36183033-36183347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
76, 13
               

               
Conread position:
               
331-673
               

               
Cow position:
               
chr29:23578019-23577684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
76, 147
               

               
Conread position:
               
331-693
               

               
Cow position:
               
chr29:13372420-13372795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
76, 214
               

               
Conread position:
               
331-740
               

               
Cow position:
               
chr29:6925775-6926159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
13, 67
               

               
Conread position:
               
331-751
               

               
Cow position:
               
chr29:10653104-10653511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
99, 126
               

               
Conread position:
               
331-759
               

               
Cow position:
               
chr29:11915573-11916018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
76, 266
               

               
Conread position:
               
331-764
               

               
Cow position:
               
chr29:10058770-10058340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 73
               

               
Conread position:
               
331-765
               

               
Cow position:
               
chr29:4625236-4624792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
76, 59
               

               
Conread position:
               
332-470
               

               
Cow position:
               
chr29:21665728-21665869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
332-563
               

               
Cow position:
               
chr29:35636182-35636426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
44, 223
               

               
Conread position:
               
332-688
               

               
Cow position:
               
chr29:16309508-16309862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
113, 73
               

               
Conread position:
               
332-765
               

               
Cow position:
               
chr29:26017753-26017295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
75, 31
               

               
Conread position:
               
333-604
               

               
Cow position:
               
chr29:32521628-32521909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
71, 11
               

               
Conread position:
               
333-622
               

               
Cow position:
               
chr29:24119978-24119688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
74, 147
               

               
Conread position:
               
333-762
               

               
Cow position:
               
chr29:27816128-27816536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
200, 72
               

               
Conread position:
               
334-648
               

               
Cow position:
               
chr29:17668255-17668566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
73, 130
               

               
Conread position:
               
334-748
               

               
Cow position:
               
chr29:699855-699442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
72, 28
               

               
Conread position:
               
335-490
               

               
Cow position:
               
chr29:13458820-13458978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
72, 9
               

               
Conread position:
               
335-580
               

               
Cow position:
               
chr29:30812511-30812763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
72, 154
               

               
Conread position:
               
335-690
               

               
Cow position:
               
chr29:13639605-13639249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
84, 9
               

               
Conread position:
               
335-750
               

               
Cow position:
               
chr29:34744855-34744443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
69, 9
               

               
Conread position:
               
336-607
               

               
Cow position:
               
chr29:1395368-1395635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
109, 15
               

               
Conread position:
               
337-576
               

               
Cow position:
               
chr29:11696297-11696537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
108, 22
               

               
Conread position:
               
337-580
               

               
Cow position:
               
chr29:17339535-17339290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 139
               

               
Conread position:
               
337-649
               

               
Cow position:
               
chr29:22714965-22714643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
70, 251
               

               
Conread position:
               
337-747
               

               
Cow position:
               
chr29:4520098-4520517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 270
               

               
Conread position:
               
337-759
               

               
Cow position:
               
chr29:24292642-24293067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
71, 9
               

               
Conread position:
               
338-679
               

               
Cow position:
               
chr29:11704886-11705218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
67, 127
               

               
Conread position:
               
338-707
               

               
Cow position:
               
chr29:24578640-24578998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
28, 119
               

               
Conread position:
               
338-765
               

               
Cow position:
               
chr29:34773964-34773546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 53
               

               
Conread position:
               
338-766
               

               
Cow position:
               
chr29:2623716-2623276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
66, 146
               

               
Conread position:
               
339-633
               

               
Cow position:
               
chr29:7966010-7966310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
5, 37
               

               
Conread position:
               
339-634
               

               
Cow position:
               
chr29:24103784-24103476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 185
               

               
Conread position:
               
340-580
               

               
Cow position:
               
chr29:31488633-31488876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
104, 79
               

               
Conread position:
               
341-629
               

               
Cow position:
               
chr29:22585641-22585342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
66, 171
               

               
Conread position:
               
343-631
               

               
Cow position:
               
chr29:43495828-43496101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
40, 34
               

               
Conread position:
               
345-580
               

               
Cow position:
               
chr29:2532832-2533070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
62, 139
               

               
Conread position:
               
348-597
               

               
Cow position:
               
chr29:39642950-39643204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
57, 205
               

               
Conread position:
               
348-604
               

               
Cow position:
               
chr29:26329988-26330241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
95, 15
               

               
Conread position:
               
348-637
               

               
Cow position:
               
chr29:868546-868843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
33, 29
               

               
Conread position:
               
348-637
               

               
Cow position:
               
chr29:1229382-1229675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
59, 48
               

               
Conread position:
               
348-637
               

               
Cow position:
               
chr29:19428437-19428731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
97, 56
               

               
Conread position:
               
348-688
               

               
Cow position:
               
chr29:45005845-45005514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 57
               

               
Conread position:
               
348-697
               

               
Cow position:
               
chr29:19821070-19821408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
96, 51
               

               
Conread position:
               
348-721
               

               
Cow position:
               
chr29:24624021-24624407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
60, 237
               

               
Conread position:
               
348-765
               

               
Cow position:
               
chr29:23844605-23845046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
59, 133
               

               
Conread position:
               
349-764
               

               
Cow position:
               
chr29:23697753-23698173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
58, 82
               

               
Conread position:
               
351-688
               

               
Cow position:
               
chr29:40096733-40097089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
56, 248
               

               
Conread position:
               
351-745
               

               
Cow position:
               
chr29:23155027-23155400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
56, 77
               

               
Conread position:
               
352-688
               

               
Cow position:
               
chr29:6286380-6286046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
55, 69
               

               
Conread position:
               
353-674
               

               
Cow position:
               
chr29:22936058-22936372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
132, 52
               

               
Conread position:
               
353-676
               

               
Cow position:
               
chr29:11398127-11397823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
92, 14
               

               
Conread position:
               
354-547
               

               
Cow position:
               
chr29:5109431-5109224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
354-636
               

               
Cow position:
               
chr29:28739408-28739692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
91, 43
               

               
Conread position:
               
354-676
               

               
Cow position:
               
chr29:463874-463549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
53, 133
               

               
Conread position:
               
357-603
               

               
Cow position:
               
chr29:28446477-28446215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
50, 228
               

               
Conread position:
               
357-693
               

               
Cow position:
               
chr29:40299230-40298900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
46, 151
               

               
Conread position:
               
357-748
               

               
Cow position:
               
chr29:35677762-35677355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
90, 48
               

               
Conread position:
               
358-759
               

               
Cow position:
               
chr29:31489103-31489522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
58, 175
               

               
Conread position:
               
359-604
               

               
Cow position:
               
chr29:14484761-14484502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
360-583
               

               
Cow position:
               
chr29:8190676-8190448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
47, 67
               

               
Conread position:
               
360-757
               

               
Cow position:
               
chr29:30440711-30441134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
47, 387
               

               
Conread position:
               
361-761
               

               
Cow position:
               
chr29:44682304-44681932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
84, 36
               

               
Conread position:
               
362-693
               

               
Cow position:
               
chr29:43251376-43251045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
59, 42
               

               
Conread position:
               
363-688
               

               
Cow position:
               
chr29:26654252-26653916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
44, 177
               

               
Conread position:
               
369-759
               

               
Cow position:
               
chr29:22690014-22690424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
38, 185
               

               
Conread position:
               
371-640
               

               
Cow position:
               
chr29:1022086-1022367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
37, 133
               

               
Conread position:
               
371-768
               

               
Cow position:
               
chr29:17154572-17154967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
74, 34
               

               
Conread position:
               
372-688
               

               
Cow position:
               
chr29:43009287-43008969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
35, 168
               

               
Conread position:
               
374-763
               

               
Cow position:
               
chr29:11433922-11434313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
33, 173
               

               
Conread position:
               
380-721
               

               
Cow position:
               
chr29:9718967-9718615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
25, 108
               

               
Conread position:
               
383-662
               

               
Cow position:
               
chr29:32211251-32210978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
24, 134
               

               
Conread position:
               
384-662
               

               
Cow position:
               
chr29:5186689-5186400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
23, 91
               

               
Conread position:
               
384-733
               

               
Cow position:
               
chr29:44988972-44988633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
23, 86
               

               
Conread position:
               
395-764
               

               
Cow position:
               
chr29:43099925-43099547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
12, 99
               

               
Conread position:
               
405-759
               

               
Cow position:
               
chr29:2055892-2056257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
12, 26
               

               
Conread position:
               
406-693
               

               
Cow position:
               
chr29:23244046-23243746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
39, 161
               

               
Conread position:
               
406-762
               

               
Cow position:
               
chr29:25815002-25814635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
12, 88
               

               
Conread position:
               
408-614
               

               
Cow position:
               
chr29:1124491-1124700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
37, 134
               

               
Conread position:
               
408-764
               

               
Cow position:
               
chr29:17296967-17297340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
39, 124
               

               
Conread position:
               
409-745
               

               
Cow position:
               
chr29:27826363-27826688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
36, 123
               

               
Conread position:
               
409-749
               

               
Cow position:
               
chr29:25091949-25092291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
36, 108
               

               
Conread position:
               
410-765
               

               
Cow position:
               
chr29:10018412-10018774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
35, 147
               

               
Conread position:
               
415-721
               

               
Cow position:
               
chr29:12025628-12025316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
30, 136
               

               
Conread position:
               
417-684
               

               
Cow position:
               
chr29:29314810-29314537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
28, 245
               

               
Conread position:
               
426-647
               

               
Cow position:
               
chr29:17301383-17301612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 217
               

               
Conread position:
               
426-749
               

               
Cow position:
               
chr29:35084369-35084036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 128
               

               
Conread position:
               
433-653
               

               
Cow position:
               
chr29:27329753-27329977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
13, 113
               

               
Conread position:
               
434-662
               

               
Cow position:
               
chr29:29176751-29176524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
44, 15
               

               
Conread position:
               
435-759
               

               
Cow position:
               
chr29:31943743-31944065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
10, 58
               

               
Conread position:
               
440-768
               

               
Cow position:
               
chr29:11666829-11667155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
5, 63
               

               
Conread position:
               
444-659
               

               
Cow position:
               
chr29:4002769-4002982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
61, 37
               

               
Conread position:
               
444-750
               

               
Cow position:
               
chr29:34359107-34358791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
51, 289
               

               
Conread position:
               
456-635
               

               
Cow position:
               
chr29:27846354-27846530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
80, 40
               

               
Conread position:
               
461-765
               

               
Cow position:
               
chr29:7624074-7624369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
62, 15
               

               
Conread position:
               
473-662
               

               
Cow position:
               
chr29:18012462-18012651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
61, 16
               

               
Conread position:
               
480-763
               

               
Cow position:
               
chr29:20770256-20770546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
57, 124
               

               
Conread position:
               
489-762
               

               
Cow position:
               
chr29:36952378-36952112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
46, 122
               

               
Conread position:
               
491-746
               

               
Cow position:
               
chr29:30548697-30548957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
43, 238
               

               
Conread position:
               
491-763
               

               
Cow position:
               
chr29:20167346-20167624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
146, 242
               

               
Conread position:
               
492-761
               

               
Cow position:
               
chr29:43441568-43441307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
52, 11
               

               
Conread position:
               
493-764
               

               
Cow position:
               
chr29:38980145-38979877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
99, 44
               

               
Conread position:
               
496-700
               

               
Cow position:
               
chr29:38978457-38978660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
5, 140
               

               
Conread position:
               
498-636
               

               
Cow position:
               
chr29:31477185-31477046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
38, 9
               

               
Conread position:
               
500-662
               

               
Cow position:
               
chr29:23220569-23220408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
35, 138
               

               
Conread position:
               
500-748
               

               
Cow position:
               
chr29:29324481-29324234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
133, 24
               

               
Conread position:
               
501-721
               

               
Cow position:
               
chr29:32176613-32176828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
28, 48
               

               
Conread position:
               
501-744
               

               
Cow position:
               
chr29:23825287-23825030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
20, 234
               

               
Conread position:
               
501-747
               

               
Cow position:
               
chr29:44139312-44139060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
42, 131
               

               
Conread position:
               
502-763
               

               
Cow position:
               
chr29:41112940-41112688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
181, 32
               

               
Conread position:
               
510-766
               

               
Cow position:
               
chr29:42630064-42630324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
128, 33
               

               
Conread position:
               
523-765
               

               
Cow position:
               
chr29:31651366-31651605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
92, 19
               

               
Conread position:
               
526-690
               

               
Cow position:
               
chr29:30918506-30918666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
526-764
               

               
Cow position:
               
chr29:8686287-8686511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
531-747
               

               
Cow position:
               
chr29:4070590-4070805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
68, 49
               

               
Conread position:
               
534-765
               

               
Cow position:
               
chr29:31981797-31982028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
146, 7
               

               
Conread position:
               
536-748
               

               
Cow position:
               
chr29:32197664-32197880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
110, 102
               

               
Conread position:
               
537-750
               

               
Cow position:
               
chr29:17804502-17804718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
7, 90
               

               
Conread position:
               
537-763
               

               
Cow position:
               
chr29:39038299-39038068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
127, 6
               

               
Conread position:
               
538-749
               

               
Cow position:
               
chr29:4423471-4423263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
16, 118
               

               
Conread position:
               
538-765
               

               
Cow position:
               
chr29:9310569-9310806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
77, 69
               

               
Conread position:
               
538-765
               

               
Cow position:
               
chr29:16278957-16279180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
117, 64
               

               
Conread position:
               
544-744
               

               
Cow position:
               
chr29:22723576-22723778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
120, 182
               

               
Conread position:
               
548-765
               

               
Cow position:
               
chr29:29308593-29308378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
17, 110
               

               
Conread position:
               
552-763
               

               
Cow position:
               
chr29:9378620-9378837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
107, 141
               

               
Conread position:
               
558-763
               

               
Cow position:
               
chr29:19363700-19363909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
103, 52
               

               
Conread position:
               
558-766
               

               
Cow position:
               
chr29:36781315-36781107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
106, 164
               
Show alignments to all cow chromosomes.